RNA–Protein interactions for RNA: ENST00000320936.9

CIRBP-201, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIRBP, Length 1,328 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-201ENST00000320936 CTTNBP2NLQ9P2B4 639 aa19.24■□□□□ 0.67
CIRBP-201ENST00000320936 SMG5Q9UPR3 1016 aaKnown RBP19.24■□□□□ 0.67
CIRBP-201ENST00000320936 INVSQ9Y283 1065 aa19.24■□□□□ 0.67
CIRBP-201ENST00000320936 DMDP11532 3685 aa19.23■□□□□ 0.67
CIRBP-201ENST00000320936 NYNRINQ9P2P1 1898 aaKnown RBP19.23■□□□□ 0.67
CIRBP-201ENST00000320936 FRYLO94915 3013 aa19.23■□□□□ 0.67
CIRBP-201ENST00000320936 DRGXA6NNA5 263 aa19.23■□□□□ 0.67
CIRBP-201ENST00000320936 FAM72CH0Y354 149 aa19.23■□□□□ 0.67
CIRBP-201ENST00000320936 CREB3O43889 395 aa19.23■□□□□ 0.67
CIRBP-201ENST00000320936 LMNAP02545 664 aaKnown RBP19.23■□□□□ 0.67
CIRBP-201ENST00000320936 H2AFZP0C0S5 128 aa19.23■□□□□ 0.67
CIRBP-201ENST00000320936 CTSOP43234 321 aaPredicted RBP19.23■□□□□ 0.67
CIRBP-201ENST00000320936 AIF1P55008 147 aa19.23■□□□□ 0.67
CIRBP-201ENST00000320936 PTPRNQ16849 979 aa19.23■□□□□ 0.67
CIRBP-201ENST00000320936 USP39Q53GS9 565 aaKnown RBP19.23■□□□□ 0.67
CIRBP-201ENST00000320936 FAM72AQ5TYM5 149 aa19.23■□□□□ 0.67
CIRBP-201ENST00000320936 FAM72DQ6L9T8 149 aa19.23■□□□□ 0.67
CIRBP-201ENST00000320936 H2AFVQ71UI9 128 aa19.23■□□□□ 0.67
CIRBP-201ENST00000320936 RASSF3Q86WH2 238 aa19.23■□□□□ 0.67
CIRBP-201ENST00000320936 FAM72BQ86X60 149 aa19.23■□□□□ 0.67
CIRBP-201ENST00000320936 PYROXD2Q8N2H3 581 aa19.23■□□□□ 0.67
CIRBP-201ENST00000320936 ZNF564Q8TBZ8 553 aaPredicted RBP19.23■□□□□ 0.67
CIRBP-201ENST00000320936 BTBD6Q96KE9 485 aa19.23■□□□□ 0.67
CIRBP-201ENST00000320936 SPACA7Q96KW9 195 aa19.23■□□□□ 0.67
CIRBP-201ENST00000320936 PACSIN1Q9BY11 444 aa19.23■□□□□ 0.67
CIRBP-201ENST00000320936 MAGEB5Q9BZ81 275 aa19.23■□□□□ 0.67
CIRBP-201ENST00000320936 GPATCH2LQ9NWQ4 482 aa19.23■□□□□ 0.67
CIRBP-201ENST00000320936 PPARGC1AQ9UBK2 798 aaKnown RBP19.23■□□□□ 0.67
CIRBP-201ENST00000320936 SLC25A13Q9UJS0 675 aa19.23■□□□□ 0.67
CIRBP-201ENST00000320936 FZD10Q9ULW2 581 aa19.23■□□□□ 0.67
CIRBP-201ENST00000320936 NENFQ9UMX5 172 aa19.23■□□□□ 0.67
CIRBP-201ENST00000320936 AP4E1Q9UPM8 1137 aa19.23■□□□□ 0.67
CIRBP-201ENST00000320936 ERVW-1Q9UQF0 538 aa19.23■□□□□ 0.67
CIRBP-201ENST00000320936 SPAG17Q6Q759 2223 aa19.22■□□□□ 0.67
CIRBP-201ENST00000320936 PROB1E7EW31 1015 aa19.22■□□□□ 0.67
CIRBP-201ENST00000320936 HRO43593 1189 aa19.22■□□□□ 0.67
CIRBP-201ENST00000320936 LRIG2O94898 1065 aa19.22■□□□□ 0.67
CIRBP-201ENST00000320936 GABRG2P18507 467 aa19.22■□□□□ 0.67
CIRBP-201ENST00000320936 NDUFV2P19404 249 aa19.22■□□□□ 0.67
CIRBP-201ENST00000320936 MIPP30301 263 aa19.22■□□□□ 0.67
CIRBP-201ENST00000320936 NNMTP40261 264 aa19.22■□□□□ 0.67
CIRBP-201ENST00000320936 SSR1P43307 286 aaKnown RBP19.22■□□□□ 0.67
CIRBP-201ENST00000320936 STK19P49842 368 aaPredicted RBP19.22■□□□□ 0.67
CIRBP-201ENST00000320936 NRG1Q02297 640 aaPredicted RBP19.22■□□□□ 0.67
CIRBP-201ENST00000320936 SULT2A1Q06520 285 aa19.22■□□□□ 0.67
CIRBP-201ENST00000320936 ASTE1Q2TB18 679 aaPredicted RBP19.22■□□□□ 0.67
CIRBP-201ENST00000320936 DAB2IPQ5VWQ8 1189 aa19.22■□□□□ 0.67
CIRBP-201ENST00000320936 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.22■□□□□ 0.67
CIRBP-201ENST00000320936 SETD3Q86TU7 594 aaPredicted RBP19.22■□□□□ 0.67
CIRBP-201ENST00000320936 OR52K2Q8NGK3 314 aa19.22■□□□□ 0.67
CIRBP-201ENST00000320936 RPL10LQ96L21 214 aaKnown RBP19.22■□□□□ 0.67
CIRBP-201ENST00000320936 NCAPGQ9BPX3 1015 aa19.22■□□□□ 0.67
CIRBP-201ENST00000320936 FEM1AQ9BSK4 669 aa19.22■□□□□ 0.67
CIRBP-201ENST00000320936 SLC6A17Q9H1V8 727 aa19.22■□□□□ 0.67
CIRBP-201ENST00000320936 EPC1Q9H2F5 836 aa19.22■□□□□ 0.67
CIRBP-201ENST00000320936 DHX35Q9H5Z1 703 aaKnown RBP19.22■□□□□ 0.67
CIRBP-201ENST00000320936 IP6K2Q9UHH9 426 aa19.22■□□□□ 0.67
CIRBP-201ENST00000320936 TBC1D30Q9Y2I9 924 aa19.22■□□□□ 0.67
CIRBP-201ENST00000320936 PRR23AA6NEV1 266 aa19.21■□□□□ 0.67
CIRBP-201ENST00000320936 MYO1FO00160 1098 aa19.21■□□□□ 0.67
CIRBP-201ENST00000320936 GFRA3O60609 400 aa19.21■□□□□ 0.67
CIRBP-201ENST00000320936 LRCH4O75427 683 aa19.21■□□□□ 0.67
CIRBP-201ENST00000320936 SRPRAP08240 638 aaKnown RBP19.21■□□□□ 0.67
CIRBP-201ENST00000320936 EPHB2P29323 1055 aa19.21■□□□□ 0.67
CIRBP-201ENST00000320936 MRE11P49959 708 aa19.21■□□□□ 0.67
CIRBP-201ENST00000320936 ENPP2Q13822 863 aa19.21■□□□□ 0.67
CIRBP-201ENST00000320936 PIGHQ14442 188 aaPredicted RBP19.21■□□□□ 0.67
CIRBP-201ENST00000320936 MANEALQ5VSG8 457 aa19.21■□□□□ 0.67
CIRBP-201ENST00000320936 SPON2Q9BUD6 331 aa19.21■□□□□ 0.67
CIRBP-201ENST00000320936 C2orf49Q9BVC5 232 aaPredicted RBP19.21■□□□□ 0.67
CIRBP-201ENST00000320936 TMEM245Q9H330 911 aa19.21■□□□□ 0.67
CIRBP-201ENST00000320936 PRDM16Q9HAZ2 1276 aa19.21■□□□□ 0.67
CIRBP-201ENST00000320936 DNAI1Q9UI46 699 aa19.21■□□□□ 0.67
CIRBP-201ENST00000320936 DCLK1O15075 740 aa19.2■□□□□ 0.66
CIRBP-201ENST00000320936 RHOQP17081 205 aa19.2■□□□□ 0.66
CIRBP-201ENST00000320936 L1CAMP32004 1257 aa19.2■□□□□ 0.66
CIRBP-201ENST00000320936 TPI1P60174 286 aa19.2■□□□□ 0.66
CIRBP-201ENST00000320936 KRT83P78385 493 aa19.2■□□□□ 0.66
CIRBP-201ENST00000320936 PPP6R3Q5H9R7 873 aaPredicted RBP19.2■□□□□ 0.66
CIRBP-201ENST00000320936 ERMARDQ5T6L9 678 aa19.2■□□□□ 0.66
CIRBP-201ENST00000320936 ASCL5Q7RTU5 278 aa19.2■□□□□ 0.66
CIRBP-201ENST00000320936 SPC24Q8NBT2 197 aa19.2■□□□□ 0.66
CIRBP-201ENST00000320936 RLN3Q8WXF3 142 aa19.2■□□□□ 0.66
CIRBP-201ENST00000320936 PEBP4Q96S96 227 aa19.2■□□□□ 0.66
CIRBP-201ENST00000320936 SNRNP25Q9BV90 132 aaKnown RBP19.2■□□□□ 0.66
CIRBP-201ENST00000320936 ZWILCHQ9H900 591 aa19.2■□□□□ 0.66
CIRBP-201ENST00000320936 UVRAGQ9P2Y5 699 aa19.2■□□□□ 0.66
CIRBP-201ENST00000320936 NCDNQ9UBB6 729 aa19.2■□□□□ 0.66
CIRBP-201ENST00000320936 SUN2Q9UH99 717 aa19.2■□□□□ 0.66
CIRBP-201ENST00000320936 USP18Q9UMW8 372 aa19.2■□□□□ 0.66
CIRBP-201ENST00000320936 TMEM110-MUSTN1A8MSY1 372 aa19.19■□□□□ 0.66
CIRBP-201ENST00000320936 GOLGA6L6A8MZA4 724 aa19.19■□□□□ 0.66
CIRBP-201ENST00000320936 MAP3K13O43283 966 aa19.19■□□□□ 0.66
CIRBP-201ENST00000320936 TMEM253P0C7T8 217 aa19.19■□□□□ 0.66
CIRBP-201ENST00000320936 PLK1P53350 603 aa19.19■□□□□ 0.66
CIRBP-201ENST00000320936 BYSLQ13895 437 aaKnown RBP19.19■□□□□ 0.66
CIRBP-201ENST00000320936 ACAP1Q15027 740 aa19.19■□□□□ 0.66
CIRBP-201ENST00000320936 SMTNL2Q2TAL5 461 aa19.19■□□□□ 0.66
CIRBP-201ENST00000320936 ACCSLQ4AC99 568 aa19.19■□□□□ 0.66
CIRBP-201ENST00000320936 IL31Q6EBC2 164 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms