RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 SSTR1P30872 391 aa18.28■□□□□ 0.52
RAB39A-201ENST00000320578 STX2P32856 288 aa18.28■□□□□ 0.52
RAB39A-201ENST00000320578 IFNAR2P48551 515 aa18.28■□□□□ 0.52
RAB39A-201ENST00000320578 ATP1A2P50993 1020 aa18.28■□□□□ 0.52
RAB39A-201ENST00000320578 HP1BP3Q5SSJ5 553 aaPredicted RBP18.28■□□□□ 0.52
RAB39A-201ENST00000320578 PSRC1Q6PGN9 363 aaPredicted RBP18.28■□□□□ 0.52
RAB39A-201ENST00000320578 CNPY4Q8N129 248 aa18.28■□□□□ 0.52
RAB39A-201ENST00000320578 AGGF1Q8N302 714 aaeCLIP18.28■□□□□ 0.52
RAB39A-201ENST00000320578 NETO2Q8NC67 525 aa18.28■□□□□ 0.52
RAB39A-201ENST00000320578 PHOSPHO2Q8TCD6 241 aa18.28■□□□□ 0.52
RAB39A-201ENST00000320578 SP7Q8TDD2 431 aaPredicted RBP18.28■□□□□ 0.52
RAB39A-201ENST00000320578 FBF1Q8TES7 1133 aa18.28■□□□□ 0.52
RAB39A-201ENST00000320578 PLD4Q96BZ4 506 aa18.28■□□□□ 0.52
RAB39A-201ENST00000320578 IL12RB2Q99665 862 aa18.28■□□□□ 0.52
RAB39A-201ENST00000320578 EBNA1BP2Q99848 306 aaKnown RBP18.28■□□□□ 0.52
RAB39A-201ENST00000320578 NAT9Q9BTE0 207 aa18.28■□□□□ 0.52
RAB39A-201ENST00000320578 SLC39A8Q9C0K1 460 aa18.28■□□□□ 0.52
RAB39A-201ENST00000320578 CHMP2BQ9UQN3 213 aa18.28■□□□□ 0.52
RAB39A-201ENST00000320578 ASB3Q9Y575 518 aa18.28■□□□□ 0.52
RAB39A-201ENST00000320578 NR2E3Q9Y5X4 410 aa18.28■□□□□ 0.52
RAB39A-201ENST00000320578 AVILO75366 819 aa18.27■□□□□ 0.52
RAB39A-201ENST00000320578 AP2A1O95782 977 aa18.27■□□□□ 0.52
RAB39A-201ENST00000320578 EPHB3P54753 998 aa18.27■□□□□ 0.52
RAB39A-201ENST00000320578 KCTD11Q693B1 232 aa18.27■□□□□ 0.52
RAB39A-201ENST00000320578 FBXL22Q6P050 247 aa18.27■□□□□ 0.52
RAB39A-201ENST00000320578 ADGRD1Q6QNK2 874 aa18.27■□□□□ 0.52
RAB39A-201ENST00000320578 PDCD7Q8N8D1 485 aaKnown RBP18.27■□□□□ 0.52
RAB39A-201ENST00000320578 CELF6Q96J87 481 aaKnown RBP18.27■□□□□ 0.52
RAB39A-201ENST00000320578 PSMC3IPQ9P2W1 217 aaPredicted RBP18.27■□□□□ 0.52
RAB39A-201ENST00000320578 ZC3H7BQ9UGR2 993 aaKnown RBP18.27■□□□□ 0.52
RAB39A-201ENST00000320578 SDR42E2A6NKP2 422 aa18.26■□□□□ 0.51
RAB39A-201ENST00000320578 ZBTB24O43167 697 aaPredicted RBP18.26■□□□□ 0.51
RAB39A-201ENST00000320578 DNAJB2P25686 324 aa18.26■□□□□ 0.51
RAB39A-201ENST00000320578 CD68P34810 354 aaPredicted RBP18.26■□□□□ 0.51
RAB39A-201ENST00000320578 MAPKAPK2P49137 400 aa18.26■□□□□ 0.51
RAB39A-201ENST00000320578 GNGT1P63211 74 aa18.26■□□□□ 0.51
RAB39A-201ENST00000320578 ZBTB17Q13105 803 aa18.26■□□□□ 0.51
RAB39A-201ENST00000320578 ITIH5Q86UX2 942 aa18.26■□□□□ 0.51
RAB39A-201ENST00000320578 PSMG2Q969U7 264 aa18.26■□□□□ 0.51
RAB39A-201ENST00000320578 ZNF212Q9UDV6 495 aa18.26■□□□□ 0.51
RAB39A-201ENST00000320578 RSPH14Q9UHP6 348 aa18.26■□□□□ 0.51
RAB39A-201ENST00000320578 VANGL2Q9ULK5 521 aa18.26■□□□□ 0.51
RAB39A-201ENST00000320578 LZTS1Q9Y250 596 aa18.26■□□□□ 0.51
RAB39A-201ENST00000320578 INSL5Q9Y5Q6 135 aa18.26■□□□□ 0.51
RAB39A-201ENST00000320578 ZBBXA8MT70 800 aa18.26■□□□□ 0.51
RAB39A-201ENST00000320578 DFFAO00273 331 aa18.26■□□□□ 0.51
RAB39A-201ENST00000320578 PRRG1O14668 218 aa18.26■□□□□ 0.51
RAB39A-201ENST00000320578 TEX28O15482 410 aa18.26■□□□□ 0.51
RAB39A-201ENST00000320578 CPP00450 1065 aa18.26■□□□□ 0.51
RAB39A-201ENST00000320578 CCNB1P14635 433 aa18.26■□□□□ 0.51
RAB39A-201ENST00000320578 PRKCHP24723 683 aa18.26■□□□□ 0.51
RAB39A-201ENST00000320578 TNK2Q07912 1038 aa18.26■□□□□ 0.51
RAB39A-201ENST00000320578 PRPSAP1Q14558 356 aa18.26■□□□□ 0.51
RAB39A-201ENST00000320578 TAF12Q16514 161 aa18.26■□□□□ 0.51
RAB39A-201ENST00000320578 ANO4Q32M45 955 aa18.26■□□□□ 0.51
RAB39A-201ENST00000320578 TMEM240Q5SV17 173 aa18.26■□□□□ 0.51
RAB39A-201ENST00000320578 STEAP4Q687X5 459 aa18.26■□□□□ 0.51
RAB39A-201ENST00000320578 HERVK_113Q902F9 699 aa18.26■□□□□ 0.51
RAB39A-201ENST00000320578 BADQ92934 168 aa18.26■□□□□ 0.51
RAB39A-201ENST00000320578 XPO6Q96QU8 1125 aaKnown RBP18.26■□□□□ 0.51
RAB39A-201ENST00000320578 RAD9AQ99638 391 aa18.26■□□□□ 0.51
RAB39A-201ENST00000320578 MPP6Q9NZW5 540 aa18.26■□□□□ 0.51
RAB39A-201ENST00000320578 TCRBV9S1A1TA0A576 114 aa18.25■□□□□ 0.51
RAB39A-201ENST00000320578 ARHGAP42A6NI28 874 aa18.25■□□□□ 0.51
RAB39A-201ENST00000320578 ACSL4O60488 711 aa18.25■□□□□ 0.51
RAB39A-201ENST00000320578 OAS1P00973 400 aaKnown RBP18.25■□□□□ 0.51
RAB39A-201ENST00000320578 JCHAINP01591 159 aa18.25■□□□□ 0.51
RAB39A-201ENST00000320578 SLC11A2P49281 568 aa18.25■□□□□ 0.51
RAB39A-201ENST00000320578 HARS2P49590 506 aaKnown RBP18.25■□□□□ 0.51
RAB39A-201ENST00000320578 SLC18A1P54219 525 aa18.25■□□□□ 0.51
RAB39A-201ENST00000320578 YBEYP58557 167 aaPredicted RBP18.25■□□□□ 0.51
RAB39A-201ENST00000320578 PABPC1LQ4VXU2 614 aaKnown RBP18.25■□□□□ 0.51
RAB39A-201ENST00000320578 DNAJB7Q7Z6W7 309 aaPredicted RBP18.25■□□□□ 0.51
RAB39A-201ENST00000320578 FCRL5Q96RD9 977 aa18.25■□□□□ 0.51
RAB39A-201ENST00000320578 GORASP1Q9BQQ3 440 aa18.25■□□□□ 0.51
RAB39A-201ENST00000320578 NOL6Q9H6R4 1146 aaKnown RBP18.25■□□□□ 0.51
RAB39A-201ENST00000320578 PCDHA11Q9Y5I1 949 aa18.25■□□□□ 0.51
RAB39A-201ENST00000320578 IRAK3Q9Y616 596 aa18.25■□□□□ 0.51
RAB39A-201ENST00000320578 COCHO43405 550 aa18.24■□□□□ 0.51
RAB39A-201ENST00000320578 TACR2P21452 398 aa18.24■□□□□ 0.51
RAB39A-201ENST00000320578 PAPOLAP51003 745 aaKnown RBP18.24■□□□□ 0.51
RAB39A-201ENST00000320578 TWF1Q12792 350 aa18.24■□□□□ 0.51
RAB39A-201ENST00000320578 SKIDA1Q1XH10 827 aa18.24■□□□□ 0.51
RAB39A-201ENST00000320578 PARP15Q460N3 678 aa18.24■□□□□ 0.51
RAB39A-201ENST00000320578 SYCP2LQ5T4T6 812 aa18.24■□□□□ 0.51
RAB39A-201ENST00000320578 RAP1GAP2Q684P5 730 aa18.24■□□□□ 0.51
RAB39A-201ENST00000320578 NADSYN1Q6IA69 706 aa18.24■□□□□ 0.51
RAB39A-201ENST00000320578 ZNF449Q6P9G9 518 aa18.24■□□□□ 0.51
RAB39A-201ENST00000320578 TRABD2AQ86V40 505 aa18.24■□□□□ 0.51
RAB39A-201ENST00000320578 CYP4X1Q8N118 509 aa18.24■□□□□ 0.51
RAB39A-201ENST00000320578 CNTD1Q8N815 330 aa18.24■□□□□ 0.51
RAB39A-201ENST00000320578 DEPDC1BQ8WUY9 529 aa18.24■□□□□ 0.51
RAB39A-201ENST00000320578 CEP41Q9BYV8 373 aa18.24■□□□□ 0.51
RAB39A-201ENST00000320578 LRRC40Q9H9A6 602 aa18.24■□□□□ 0.51
RAB39A-201ENST00000320578 CASS4Q9NQ75 786 aa18.24■□□□□ 0.51
RAB39A-201ENST00000320578 NDFIP2Q9NV92 336 aa18.24■□□□□ 0.51
RAB39A-201ENST00000320578 CTNNAL1Q9UBT7 734 aa18.24■□□□□ 0.51
RAB39A-201ENST00000320578 AAR2Q9Y312 384 aaKnown RBP18.24■□□□□ 0.51
RAB39A-201ENST00000320578 POC1B-GALNT4F8VUJ3 575 aa18.23■□□□□ 0.51
RAB39A-201ENST00000320578 ALDH1A2O94788 518 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms