RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 PPP2R5DQ14738 602 aa15.93■□□□□ 0.14
SHROOM1-201ENST00000319854 PDK3Q15120 406 aa15.93■□□□□ 0.14
SHROOM1-201ENST00000319854 C6orf163Q5TEZ5 329 aa15.93■□□□□ 0.14
SHROOM1-201ENST00000319854 KIAA0319Q5VV43 1072 aa15.93■□□□□ 0.14
SHROOM1-201ENST00000319854 SLC9A4Q6AI14 798 aa15.93■□□□□ 0.14
SHROOM1-201ENST00000319854 DUS1LQ6P1R4 473 aaKnown RBP15.93■□□□□ 0.14
SHROOM1-201ENST00000319854 UGT2A3Q6UWM9 527 aa15.93■□□□□ 0.14
SHROOM1-201ENST00000319854 ALKAL1Q6UXT8 129 aa15.93■□□□□ 0.14
SHROOM1-201ENST00000319854 UNC5AQ6ZN44 842 aa15.93■□□□□ 0.14
SHROOM1-201ENST00000319854 ZNF560Q96MR9 790 aa15.93■□□□□ 0.14
SHROOM1-201ENST00000319854 DNAJB4Q9UDY4 337 aa15.93■□□□□ 0.14
SHROOM1-201ENST00000319854 BLOC1S6Q9UL45 172 aa15.93■□□□□ 0.14
SHROOM1-201ENST00000319854 INPP5FQ9Y2H2 1132 aa15.93■□□□□ 0.14
SHROOM1-201ENST00000319854 TTLL3Q9Y4R7 772 aa15.93■□□□□ 0.14
SHROOM1-201ENST00000319854 NRP1O14786 923 aa15.93■□□□□ 0.14
SHROOM1-201ENST00000319854 MAGEB3O15480 346 aa15.93■□□□□ 0.14
SHROOM1-201ENST00000319854 USP17L7P0C7H9 530 aa15.93■□□□□ 0.14
SHROOM1-201ENST00000319854 PIM1P11309 404 aaPredicted RBP15.93■□□□□ 0.14
SHROOM1-201ENST00000319854 TGM2P21980 687 aa15.93■□□□□ 0.14
SHROOM1-201ENST00000319854 HPCAP84074 193 aa15.93■□□□□ 0.14
SHROOM1-201ENST00000319854 BST1Q10588 318 aa15.93■□□□□ 0.14
SHROOM1-201ENST00000319854 SLC26A9Q7LBE3 791 aa15.93■□□□□ 0.14
SHROOM1-201ENST00000319854 UNC93AQ86WB7 457 aa15.93■□□□□ 0.14
SHROOM1-201ENST00000319854 GDPD5Q8WTR4 605 aa15.93■□□□□ 0.14
SHROOM1-201ENST00000319854 PHF12Q96QT6 1004 aa15.93■□□□□ 0.14
SHROOM1-201ENST00000319854 ZNF670Q9BS34 389 aa15.93■□□□□ 0.14
SHROOM1-201ENST00000319854 GPAMQ9HCL2 828 aa15.93■□□□□ 0.14
SHROOM1-201ENST00000319854 NUP205Q92621 2012 aa15.93■□□□□ 0.14
SHROOM1-201ENST00000319854 MYBPHLA2RUH7 354 aa15.93■□□□□ 0.14
SHROOM1-201ENST00000319854 ARHGAP42A6NI28 874 aa15.93■□□□□ 0.14
SHROOM1-201ENST00000319854 FAM72CH0Y354 149 aa15.93■□□□□ 0.14
SHROOM1-201ENST00000319854 COPEO14579 308 aa15.93■□□□□ 0.14
SHROOM1-201ENST00000319854 PTGESO14684 152 aa15.93■□□□□ 0.14
SHROOM1-201ENST00000319854 CHADO15335 359 aa15.93■□□□□ 0.14
SHROOM1-201ENST00000319854 AMHP03971 560 aa15.93■□□□□ 0.14
SHROOM1-201ENST00000319854 ZNF865P0CJ78 1059 aaPredicted RBP15.93■□□□□ 0.14
SHROOM1-201ENST00000319854 ABCG1P45844 678 aa15.93■□□□□ 0.14
SHROOM1-201ENST00000319854 CLCNKBP51801 687 aa15.93■□□□□ 0.14
SHROOM1-201ENST00000319854 AQP5P55064 265 aa15.93■□□□□ 0.14
SHROOM1-201ENST00000319854 MAP7Q14244 749 aa15.93■□□□□ 0.14
SHROOM1-201ENST00000319854 FSCN1Q16658 493 aaKnown RBP15.93■□□□□ 0.14
SHROOM1-201ENST00000319854 FAM72AQ5TYM5 149 aa15.93■□□□□ 0.14
SHROOM1-201ENST00000319854 NCBP2-AS2Q69YL0 99 aa15.93■□□□□ 0.14
SHROOM1-201ENST00000319854 FAM72DQ6L9T8 149 aa15.93■□□□□ 0.14
SHROOM1-201ENST00000319854 PAOXQ6QHF9 649 aa15.93■□□□□ 0.14
SHROOM1-201ENST00000319854 FAM72BQ86X60 149 aa15.93■□□□□ 0.14
SHROOM1-201ENST00000319854 METTL25Q8N6Q8 603 aa15.93■□□□□ 0.14
SHROOM1-201ENST00000319854 SLC26A7Q8TE54 656 aa15.93■□□□□ 0.14
SHROOM1-201ENST00000319854 APOL2Q9BQE5 337 aa15.93■□□□□ 0.14
SHROOM1-201ENST00000319854 POPDC2Q9HBU9 364 aa15.93■□□□□ 0.14
SHROOM1-201ENST00000319854 SLC15A5A6NIM6 579 aa15.92■□□□□ 0.14
SHROOM1-201ENST00000319854 PDE5AO76074 875 aa15.92■□□□□ 0.14
SHROOM1-201ENST00000319854 TFAP2AP05549 437 aa15.92■□□□□ 0.14
SHROOM1-201ENST00000319854 PTPN1P18031 435 aaKnown RBP15.92■□□□□ 0.14
SHROOM1-201ENST00000319854 TBL3Q12788 808 aaKnown RBP15.92■□□□□ 0.14
SHROOM1-201ENST00000319854 MMEL1Q495T6 779 aa15.92■□□□□ 0.14
SHROOM1-201ENST00000319854 ZCCHC23Q6ZST2 131 aa15.92■□□□□ 0.14
SHROOM1-201ENST00000319854 GPRIN1Q7Z2K8 1008 aa15.92■□□□□ 0.14
SHROOM1-201ENST00000319854 POU5F2Q8N7G0 328 aa15.92■□□□□ 0.14
SHROOM1-201ENST00000319854 SLC44A1Q8WWI5 657 aa15.92■□□□□ 0.14
SHROOM1-201ENST00000319854 DGCR14Q96DF8 476 aaKnown RBP15.92■□□□□ 0.14
SHROOM1-201ENST00000319854 TNIP3Q96KP6 325 aa15.92■□□□□ 0.14
SHROOM1-201ENST00000319854 MYOCOSA0A1B0GUC4 107 aa15.92■□□□□ 0.14
SHROOM1-201ENST00000319854 MDM4O15151 490 aa15.92■□□□□ 0.14
SHROOM1-201ENST00000319854 STAU1O95793 577 aaKnown RBP15.92■□□□□ 0.14
SHROOM1-201ENST00000319854 POMCP01189 267 aa15.92■□□□□ 0.14
SHROOM1-201ENST00000319854 SNX16P57768 344 aa15.92■□□□□ 0.14
SHROOM1-201ENST00000319854 CCNIQ14094 377 aa15.92■□□□□ 0.14
SHROOM1-201ENST00000319854 CDKL3Q8IVW4 592 aaPredicted RBP15.92■□□□□ 0.14
SHROOM1-201ENST00000319854 WNT8BQ93098 351 aa15.92■□□□□ 0.14
SHROOM1-201ENST00000319854 ALKBH8Q96BT7 664 aaKnown RBP15.92■□□□□ 0.14
SHROOM1-201ENST00000319854 APOPT1Q96IL0 206 aa15.92■□□□□ 0.14
SHROOM1-201ENST00000319854 PRICKLE1Q96MT3 831 aaPredicted RBP15.92■□□□□ 0.14
SHROOM1-201ENST00000319854 SRPK1Q96SB4 655 aaKnown RBP15.92■□□□□ 0.14
SHROOM1-201ENST00000319854 ULBP1Q9BZM6 244 aa15.92■□□□□ 0.14
SHROOM1-201ENST00000319854 KLHL4Q9C0H6 718 aa15.92■□□□□ 0.14
SHROOM1-201ENST00000319854 PLAC1Q9HBJ0 212 aa15.92■□□□□ 0.14
SHROOM1-201ENST00000319854 PIGVQ9NUD9 493 aa15.92■□□□□ 0.14
SHROOM1-201ENST00000319854 KCNK4Q9NYG8 393 aa15.92■□□□□ 0.14
SHROOM1-201ENST00000319854 MBLAC1A4D2B0 266 aaPredicted RBP15.91■□□□□ 0.14
SHROOM1-201ENST00000319854 YJEFN3A6XGL0 299 aa15.91■□□□□ 0.14
SHROOM1-201ENST00000319854 DPYSL4O14531 572 aa15.91■□□□□ 0.14
SHROOM1-201ENST00000319854 ATP9BO43861 1147 aa15.91■□□□□ 0.14
SHROOM1-201ENST00000319854 TMCC1O94876 653 aa15.91■□□□□ 0.14
SHROOM1-201ENST00000319854 NCAM1P13591 858 aa15.91■□□□□ 0.14
SHROOM1-201ENST00000319854 EPHB1P54762 984 aa15.91■□□□□ 0.14
SHROOM1-201ENST00000319854 DPYSL2Q16555 572 aa15.91■□□□□ 0.14
SHROOM1-201ENST00000319854 SV2CQ496J9 727 aa15.91■□□□□ 0.14
SHROOM1-201ENST00000319854 KLHDC10Q6PID8 442 aa15.91■□□□□ 0.14
SHROOM1-201ENST00000319854 COLGALT1Q8NBJ5 622 aa15.91■□□□□ 0.14
SHROOM1-201ENST00000319854 TFB1MQ8WVM0 346 aaKnown RBP15.91■□□□□ 0.14
SHROOM1-201ENST00000319854 HTR3CQ8WXA8 447 aa15.91■□□□□ 0.14
SHROOM1-201ENST00000319854 ABTB1Q969K4 478 aaPredicted RBP15.91■□□□□ 0.14
SHROOM1-201ENST00000319854 SHCBP1LQ9BZQ2 653 aa15.91■□□□□ 0.14
SHROOM1-201ENST00000319854 PPCSQ9HAB8 311 aa15.91■□□□□ 0.14
SHROOM1-201ENST00000319854 TMEM30AQ9NV96 361 aa15.91■□□□□ 0.14
SHROOM1-201ENST00000319854 MIOSQ9NXC5 875 aa15.91■□□□□ 0.14
SHROOM1-201ENST00000319854 UBP1Q9NZI7 540 aa15.91■□□□□ 0.14
SHROOM1-201ENST00000319854 NDC80O14777 642 aa15.91■□□□□ 0.14
SHROOM1-201ENST00000319854 FKBP6O75344 327 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms