RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 GATA5Q9BWX5 397 aaPredicted RBP14.51□□□□□ -0.09
PABPC1-201ENST00000318607 TSPYL2Q9H2G4 693 aaPredicted RBP14.51□□□□□ -0.09
PABPC1-201ENST00000318607 QTRT2Q9H974 415 aaKnown RBP14.51□□□□□ -0.09
PABPC1-201ENST00000318607 TRPC7Q9HCX4 862 aa14.51□□□□□ -0.09
PABPC1-201ENST00000318607 GIMAP2Q9UG22 337 aa14.51□□□□□ -0.09
PABPC1-201ENST00000318607 CDC14AQ9UNH5 594 aa14.51□□□□□ -0.09
PABPC1-201ENST00000318607 AP4E1Q9UPM8 1137 aa14.51□□□□□ -0.09
PABPC1-201ENST00000318607 AKT3Q9Y243 479 aa14.51□□□□□ -0.09
PABPC1-201ENST00000318607 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.51□□□□□ -0.09
PABPC1-201ENST00000318607 MAN1A2O60476 641 aa14.51□□□□□ -0.09
PABPC1-201ENST00000318607 GLRA3O75311 464 aa14.51□□□□□ -0.09
PABPC1-201ENST00000318607 PARNO95453 639 aaKnown RBP14.51□□□□□ -0.09
PABPC1-201ENST00000318607 SLC4A1P02730 911 aa14.51□□□□□ -0.09
PABPC1-201ENST00000318607 PGK2P07205 417 aa14.51□□□□□ -0.09
PABPC1-201ENST00000318607 CTBP1Q13363 440 aa14.51□□□□□ -0.09
PABPC1-201ENST00000318607 ZIK1Q3SY52 487 aaPredicted RBP14.51□□□□□ -0.09
PABPC1-201ENST00000318607 FUT11Q495W5 492 aa14.51□□□□□ -0.09
PABPC1-201ENST00000318607 PDCD6IPQ8WUM4 868 aaKnown RBP14.51□□□□□ -0.09
PABPC1-201ENST00000318607 COPS5Q92905 334 aa14.51□□□□□ -0.09
PABPC1-201ENST00000318607 HPDLQ96IR7 371 aa14.51□□□□□ -0.09
PABPC1-201ENST00000318607 CNPY3Q9BT09 278 aa14.51□□□□□ -0.09
PABPC1-201ENST00000318607 PLAC1Q9HBJ0 212 aa14.51□□□□□ -0.09
PABPC1-201ENST00000318607 EBF1Q9UH73 591 aa14.51□□□□□ -0.09
PABPC1-201ENST00000318607 RUVBL2Q9Y230 463 aaKnown RBP14.51□□□□□ -0.09
PABPC1-201ENST00000318607 E7ESA3 106 aa14.51□□□□□ -0.09
PABPC1-201ENST00000318607 RNF103O00237 685 aa14.51□□□□□ -0.09
PABPC1-201ENST00000318607 ENTPD3O75355 529 aa14.51□□□□□ -0.09
PABPC1-201ENST00000318607 TGM2P21980 687 aa14.51□□□□□ -0.09
PABPC1-201ENST00000318607 JADE1Q6IE81 842 aa14.51□□□□□ -0.09
PABPC1-201ENST00000318607 KLC3Q6P597 504 aa14.51□□□□□ -0.09
PABPC1-201ENST00000318607 ZBTB49Q6ZSB9 765 aa14.51□□□□□ -0.09
PABPC1-201ENST00000318607 SH2D5Q6ZV89 423 aa14.51□□□□□ -0.09
PABPC1-201ENST00000318607 APLFQ8IW19 511 aaPredicted RBP14.51□□□□□ -0.09
PABPC1-201ENST00000318607 RIN3Q8TB24 985 aa14.51□□□□□ -0.09
PABPC1-201ENST00000318607 TMEM176AQ96HP8 235 aa14.51□□□□□ -0.09
PABPC1-201ENST00000318607 SELENONQ9NZV5 590 aa14.51□□□□□ -0.09
PABPC1-201ENST00000318607 HESX1Q9UBX0 185 aa14.51□□□□□ -0.09
PABPC1-201ENST00000318607 PSMD13Q9UNM6 376 aa14.51□□□□□ -0.09
PABPC1-201ENST00000318607 PRRC2BQ5JSZ5 2229 aaKnown RBP14.51□□□□□ -0.09
PABPC1-201ENST00000318607 LACTBL1A8MY62 500 aa14.5□□□□□ -0.09
PABPC1-201ENST00000318607 AOC1P19801 751 aa14.5□□□□□ -0.09
PABPC1-201ENST00000318607 GRIA4P48058 902 aa14.5□□□□□ -0.09
PABPC1-201ENST00000318607 PITX1P78337 314 aaPredicted RBP14.5□□□□□ -0.09
PABPC1-201ENST00000318607 CBX3Q13185 183 aa14.5□□□□□ -0.09
PABPC1-201ENST00000318607 LPIN1Q14693 890 aa14.5□□□□□ -0.09
PABPC1-201ENST00000318607 OTUD3Q5T2D3 398 aaPredicted RBP14.5□□□□□ -0.09
PABPC1-201ENST00000318607 ARHGAP17Q68EM7 881 aa14.5□□□□□ -0.09
PABPC1-201ENST00000318607 GRAMD4Q6IC98 578 aa14.5□□□□□ -0.09
PABPC1-201ENST00000318607 SNX29P2Q8IUI4 249 aa14.5□□□□□ -0.09
PABPC1-201ENST00000318607 CCDC185Q8N715 623 aa14.5□□□□□ -0.09
PABPC1-201ENST00000318607 PDZD8Q8NEN9 1154 aa14.5□□□□□ -0.09
PABPC1-201ENST00000318607 FAM151AQ8WW52 585 aa14.5□□□□□ -0.09
PABPC1-201ENST00000318607 PRICKLE1Q96MT3 831 aaPredicted RBP14.5□□□□□ -0.09
PABPC1-201ENST00000318607 ILKAPQ9H0C8 392 aaPredicted RBP14.5□□□□□ -0.09
PABPC1-201ENST00000318607 CHRAC1Q9NRG0 131 aa14.5□□□□□ -0.09
PABPC1-201ENST00000318607 SF3B1O75533 1304 aaKnown RBP eCLIP14.5□□□□□ -0.096e-6■■■■■ 43.4
PABPC1-201ENST00000318607 SMIM31A0A1B0GVY4 71 aa14.5□□□□□ -0.09
PABPC1-201ENST00000318607 CHADO15335 359 aa14.5□□□□□ -0.09
PABPC1-201ENST00000318607 VTNP04004 478 aa14.5□□□□□ -0.09
PABPC1-201ENST00000318607 GNAO1P09471 354 aa14.5□□□□□ -0.09
PABPC1-201ENST00000318607 SMIM18P0DKX4 95 aa14.5□□□□□ -0.09
PABPC1-201ENST00000318607 ASPAP45381 313 aa14.5□□□□□ -0.09
PABPC1-201ENST00000318607 ATF7IP2Q5U623 682 aa14.5□□□□□ -0.09
PABPC1-201ENST00000318607 SEL1L3Q68CR1 1132 aa14.5□□□□□ -0.09
PABPC1-201ENST00000318607 SREK1Q8WXA9 508 aaKnown RBP14.5□□□□□ -0.09
PABPC1-201ENST00000318607 KLHL32Q96NJ5 620 aa14.5□□□□□ -0.09
PABPC1-201ENST00000318607 SORT1Q99523 831 aa14.5□□□□□ -0.09
PABPC1-201ENST00000318607 SLC29A1Q99808 456 aa14.5□□□□□ -0.09
PABPC1-201ENST00000318607 SSU72Q9NP77 194 aaKnown RBP14.5□□□□□ -0.09
PABPC1-201ENST00000318607 H3BNX3 289 aa14.5□□□□□ -0.09
PABPC1-201ENST00000318607 C2P06681 752 aa14.5□□□□□ -0.09
PABPC1-201ENST00000318607 MCF2P10911 925 aa14.5□□□□□ -0.09
PABPC1-201ENST00000318607 CCDC130P13994 396 aa14.5□□□□□ -0.09
PABPC1-201ENST00000318607 ARL4AP40617 200 aa14.5□□□□□ -0.09
PABPC1-201ENST00000318607 GRIA3P42263 894 aa14.5□□□□□ -0.09
PABPC1-201ENST00000318607 GABRB2P47870 512 aa14.5□□□□□ -0.09
PABPC1-201ENST00000318607 PPP1R26Q5T8A7 1209 aaPredicted RBP14.5□□□□□ -0.09
PABPC1-201ENST00000318607 TTC33Q6PID6 262 aaPredicted RBP14.5□□□□□ -0.09
PABPC1-201ENST00000318607 BRSK2Q8IWQ3 736 aa14.5□□□□□ -0.09
PABPC1-201ENST00000318607 SLC4A11Q8NBS3 891 aa14.5□□□□□ -0.09
PABPC1-201ENST00000318607 PORCNQ9H237 461 aa14.5□□□□□ -0.09
PABPC1-201ENST00000318607 GPAMQ9HCL2 828 aa14.5□□□□□ -0.09
PABPC1-201ENST00000318607 DDX43Q9NXZ2 648 aaKnown RBP14.5□□□□□ -0.09
PABPC1-201ENST00000318607 KLK14Q9P0G3 267 aa14.5□□□□□ -0.09
PABPC1-201ENST00000318607 WARS2Q9UGM6 360 aaKnown RBP14.5□□□□□ -0.09
PABPC1-201ENST00000318607 TMCO1Q9UM00 188 aa14.5□□□□□ -0.09
PABPC1-201ENST00000318607 SNX10Q9Y5X0 201 aa14.5□□□□□ -0.09
PABPC1-201ENST00000318607 C1orf232A0A0U1RR37 186 aa14.49□□□□□ -0.09
PABPC1-201ENST00000318607 CCL22O00626 93 aa14.49□□□□□ -0.09
PABPC1-201ENST00000318607 KCNH1O95259 989 aa14.49□□□□□ -0.09
PABPC1-201ENST00000318607 SUPT20HL2P0C7V6 817 aa14.49□□□□□ -0.09
PABPC1-201ENST00000318607 KCNA2P16389 499 aa14.49□□□□□ -0.09
PABPC1-201ENST00000318607 ME2P23368 584 aa14.49□□□□□ -0.09
PABPC1-201ENST00000318607 PHEXP78562 749 aa14.49□□□□□ -0.09
PABPC1-201ENST00000318607 LAMTOR4Q0VGL1 99 aa14.49□□□□□ -0.09
PABPC1-201ENST00000318607 PPP1R8Q12972 351 aaKnown RBP14.49□□□□□ -0.09
PABPC1-201ENST00000318607 POU6F1Q14863 301 aa14.49□□□□□ -0.09
PABPC1-201ENST00000318607 KIF19Q2TAC6 998 aa14.49□□□□□ -0.09
PABPC1-201ENST00000318607 SUPT20HL1Q3ZLR7 823 aa14.49□□□□□ -0.09
PABPC1-201ENST00000318607 CCDC14Q49A88 953 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms