RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 TIPRLO75663 272 aa14.98□□□□□ -0.01
COL6A2-201ENST00000300527 CLIC3O95833 236 aa14.98□□□□□ -0.01
COL6A2-201ENST00000300527 TPH1P17752 444 aa14.98□□□□□ -0.01
COL6A2-201ENST00000300527 TRIM50Q86XT4 487 aa14.98□□□□□ -0.01
COL6A2-201ENST00000300527 LZICQ8WZA0 190 aa14.98□□□□□ -0.01
COL6A2-201ENST00000300527 LRRC39Q96DD0 335 aa14.98□□□□□ -0.01
COL6A2-201ENST00000300527 SLC29A1Q99808 456 aa14.98□□□□□ -0.01
COL6A2-201ENST00000300527 MKS1Q9NXB0 559 aa14.98□□□□□ -0.01
COL6A2-201ENST00000300527 TSPAN16Q9UKR8 245 aa14.98□□□□□ -0.01
COL6A2-201ENST00000300527 C2CD4BA6NLJ0 364 aa14.97□□□□□ -0.01
COL6A2-201ENST00000300527 MYL4P12829 197 aa14.97□□□□□ -0.01
COL6A2-201ENST00000300527 DGKDQ16760 1214 aa14.97□□□□□ -0.01
COL6A2-201ENST00000300527 GLRA4Q5JXX5 417 aa14.97□□□□□ -0.01
COL6A2-201ENST00000300527 C16orf87Q6PH81 154 aa14.97□□□□□ -0.01
COL6A2-201ENST00000300527 ABHD15Q6UXT9 468 aa14.97□□□□□ -0.01
COL6A2-201ENST00000300527 GPR141Q7Z602 305 aa14.97□□□□□ -0.01
COL6A2-201ENST00000300527 ACVR1CQ8NER5 493 aa14.97□□□□□ -0.01
COL6A2-201ENST00000300527 OR52K1Q8NGK4 314 aa14.97□□□□□ -0.01
COL6A2-201ENST00000300527 TRAPPC12Q8WVT3 735 aa14.97□□□□□ -0.01
COL6A2-201ENST00000300527 TSNARE1Q96NA8 513 aa14.97□□□□□ -0.01
COL6A2-201ENST00000300527 XYLT2Q9H1B5 865 aa14.97□□□□□ -0.01
COL6A2-201ENST00000300527 SELENONQ9NZV5 590 aa14.97□□□□□ -0.01
COL6A2-201ENST00000300527 CDC14AQ9UNH5 594 aa14.97□□□□□ -0.01
COL6A2-201ENST00000300527 AP4S1Q9Y587 144 aa14.97□□□□□ -0.01
COL6A2-201ENST00000300527 FAM149AA5PLN7 773 aa14.97□□□□□ -0.01
COL6A2-201ENST00000300527 ZNF839A8K0R7 811 aa14.97□□□□□ -0.01
COL6A2-201ENST00000300527 KPNA7A9QM74 516 aa14.97□□□□□ -0.01
COL6A2-201ENST00000300527 ATG7O95352 703 aa14.97□□□□□ -0.01
COL6A2-201ENST00000300527 FAM163BP0C2L3 166 aa14.97□□□□□ -0.01
COL6A2-201ENST00000300527 NME5P56597 212 aa14.97□□□□□ -0.01
COL6A2-201ENST00000300527 CDK18Q07002 472 aa14.97□□□□□ -0.01
COL6A2-201ENST00000300527 ARL13AQ5H913 290 aaPredicted RBP14.97□□□□□ -0.01
COL6A2-201ENST00000300527 PID1Q7Z2X4 250 aa14.97□□□□□ -0.01
COL6A2-201ENST00000300527 NSUN6Q8TEA1 469 aaKnown RBP14.97□□□□□ -0.01
COL6A2-201ENST00000300527 EFCAB1Q9HAE3 211 aa14.97□□□□□ -0.01
COL6A2-201ENST00000300527 MOCS1Q9NZB8 636 aa14.97□□□□□ -0.01
COL6A2-201ENST00000300527 UBP1Q9NZI7 540 aa14.97□□□□□ -0.01
COL6A2-201ENST00000300527 GMPR2Q9P2T1 348 aaKnown RBP14.97□□□□□ -0.01
COL6A2-201ENST00000300527 STYXL1Q9Y6J8 313 aa14.97□□□□□ -0.01
COL6A2-201ENST00000300527 COL16A1Q07092 1604 aaPredicted RBP14.97□□□□□ -0.01
COL6A2-201ENST00000300527 PRKCGP05129 697 aa14.97□□□□□ -0.01
COL6A2-201ENST00000300527 CDH5P33151 784 aaPredicted RBP14.97□□□□□ -0.01
COL6A2-201ENST00000300527 GP5P40197 560 aa14.97□□□□□ -0.01
COL6A2-201ENST00000300527 GRIA4P48058 902 aa14.97□□□□□ -0.01
COL6A2-201ENST00000300527 GOLGA7BQ2TAP0 167 aa14.97□□□□□ -0.01
COL6A2-201ENST00000300527 BOLA3Q53S33 107 aa14.97□□□□□ -0.01
COL6A2-201ENST00000300527 ZFP1Q6P2D0 407 aa14.97□□□□□ -0.01
COL6A2-201ENST00000300527 ZBTB49Q6ZSB9 765 aa14.97□□□□□ -0.01
COL6A2-201ENST00000300527 CYP4V2Q6ZWL3 525 aaPredicted RBP14.97□□□□□ -0.01
COL6A2-201ENST00000300527 FAM131BQ86XD5 332 aa14.97□□□□□ -0.01
COL6A2-201ENST00000300527 ACO2Q99798 780 aaKnown RBP14.97□□□□□ -0.01
COL6A2-201ENST00000300527 CDYLQ9Y232 598 aa14.97□□□□□ -0.01
COL6A2-201ENST00000300527 PCDHGA4Q9Y5G9 962 aa14.97□□□□□ -0.01
COL6A2-201ENST00000300527 TGM2P21980 687 aa14.96□□□□□ -0.01
COL6A2-201ENST00000300527 GPD2P43304 727 aa14.96□□□□□ -0.01
COL6A2-201ENST00000300527 NDST1P52848 882 aa14.96□□□□□ -0.01
COL6A2-201ENST00000300527 SFSWAPQ12872 951 aaKnown RBP14.96□□□□□ -0.01
COL6A2-201ENST00000300527 AMHR2Q16671 573 aa14.96□□□□□ -0.01
COL6A2-201ENST00000300527 OGFOD2Q6N063 350 aa14.96□□□□□ -0.01
COL6A2-201ENST00000300527 ZBTB8BQ8NAP8 495 aaPredicted RBP14.96□□□□□ -0.01
COL6A2-201ENST00000300527 APBB2Q92870 758 aa14.96□□□□□ -0.01
COL6A2-201ENST00000300527 RPF1Q9H9Y2 349 aaKnown RBP14.96□□□□□ -0.01
COL6A2-201ENST00000300527 NMRAL1Q9HBL8 299 aa14.96□□□□□ -0.01
COL6A2-201ENST00000300527 TMPRSS4Q9NRS4 437 aa14.96□□□□□ -0.01
COL6A2-201ENST00000300527 PRPF19Q9UMS4 504 aaKnown RBP14.96□□□□□ -0.01
COL6A2-201ENST00000300527 ZNF232Q9UNY5 417 aa14.96□□□□□ -0.01
COL6A2-201ENST00000300527 GREB1LQ9C091 1923 aaPredicted RBP14.96□□□□□ -0.01
COL6A2-201ENST00000300527 BCLAF3A2AJT9 711 aaKnown RBP14.96□□□□□ -0.01
COL6A2-201ENST00000300527 YDJCA8MPS7 323 aa14.96□□□□□ -0.01
COL6A2-201ENST00000300527 J3QRK9 145 aa14.96□□□□□ -0.01
COL6A2-201ENST00000300527 H6PDO95479 791 aa14.96□□□□□ -0.01
COL6A2-201ENST00000300527 PIM1P11309 404 aaPredicted RBP14.96□□□□□ -0.01
COL6A2-201ENST00000300527 LCP1P13796 627 aa14.96□□□□□ -0.01
COL6A2-201ENST00000300527 GOT1P17174 413 aa14.96□□□□□ -0.01
COL6A2-201ENST00000300527 UGT1A6P19224 532 aa14.96□□□□□ -0.01
COL6A2-201ENST00000300527 ACAT1P24752 427 aaKnown RBP14.96□□□□□ -0.01
COL6A2-201ENST00000300527 CNTFP26441 200 aa14.96□□□□□ -0.01
COL6A2-201ENST00000300527 EPHX2P34913 555 aa14.96□□□□□ -0.01
COL6A2-201ENST00000300527 HARS2P49590 506 aaKnown RBP14.96□□□□□ -0.01
COL6A2-201ENST00000300527 IGBP1P78318 339 aa14.96□□□□□ -0.01
COL6A2-201ENST00000300527 MAP7D1Q3KQU3 841 aa14.96□□□□□ -0.01
COL6A2-201ENST00000300527 PIGGQ5H8A4 983 aa14.96□□□□□ -0.01
COL6A2-201ENST00000300527 GPR107Q5VW38 600 aa14.96□□□□□ -0.01
COL6A2-201ENST00000300527 MAP1SQ66K74 1059 aaPredicted RBP14.96□□□□□ -0.01
COL6A2-201ENST00000300527 TTC33Q6PID6 262 aaPredicted RBP14.96□□□□□ -0.01
COL6A2-201ENST00000300527 ERI1Q8IV48 349 aaKnown RBP14.96□□□□□ -0.01
COL6A2-201ENST00000300527 LRRC43Q8N309 656 aa14.96□□□□□ -0.01
COL6A2-201ENST00000300527 SMYD1Q8NB12 490 aa14.96□□□□□ -0.01
COL6A2-201ENST00000300527 MCUQ8NE86 351 aa14.96□□□□□ -0.01
COL6A2-201ENST00000300527 CLEC4CQ8WTT0 213 aa14.96□□□□□ -0.01
COL6A2-201ENST00000300527 HTR3CQ8WXA8 447 aa14.96□□□□□ -0.01
COL6A2-201ENST00000300527 FBXL8Q96CD0 374 aa14.96□□□□□ -0.01
COL6A2-201ENST00000300527 GPRASP2Q96D09 838 aa14.96□□□□□ -0.01
COL6A2-201ENST00000300527 MCRS1Q96EZ8 462 aa14.96□□□□□ -0.01
COL6A2-201ENST00000300527 SLC39A3Q9BRY0 314 aa14.96□□□□□ -0.01
COL6A2-201ENST00000300527 TUT1Q9H6E5 874 aaKnown RBP14.96□□□□□ -0.01
COL6A2-201ENST00000300527 CCDC167Q9P0B6 97 aa14.96□□□□□ -0.01
COL6A2-201ENST00000300527 SFMBT1Q9UHJ3 866 aa14.96□□□□□ -0.01
COL6A2-201ENST00000300527 USP21Q9UK80 565 aa14.96□□□□□ -0.01
COL6A2-201ENST00000300527 TLK1Q9UKI8 766 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms