RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 TBC1D13Q9NVG8 400 aa12.27□□□□□ -0.44
PCF11-201ENST00000298281 DAPK2Q9UIK4 370 aa12.27□□□□□ -0.44
PCF11-201ENST00000298281 L1RE1Q9UN81 338 aa12.27□□□□□ -0.44
PCF11-201ENST00000298281 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.27□□□□□ -0.44
PCF11-201ENST00000298281 SH3BGRLO75368 114 aa12.27□□□□□ -0.44
PCF11-201ENST00000298281 TNFRSF21O75509 655 aa12.27□□□□□ -0.44
PCF11-201ENST00000298281 ZNF806P0C7X5 589 aa12.27□□□□□ -0.44
PCF11-201ENST00000298281 ABATP80404 500 aa12.27□□□□□ -0.44
PCF11-201ENST00000298281 TC2NQ8N9U0 490 aa12.27□□□□□ -0.44
PCF11-201ENST00000298281 MYOZ2Q9NPC6 264 aa12.27□□□□□ -0.44
PCF11-201ENST00000298281 PXDNLA1KZ92 1463 aa12.27□□□□□ -0.44
PCF11-201ENST00000298281 TPBGLP0DKB5 382 aa12.27□□□□□ -0.44
PCF11-201ENST00000298281 ACO1P21399 889 aaKnown RBP12.27□□□□□ -0.44
PCF11-201ENST00000298281 CCZ1BP86790 482 aa12.27□□□□□ -0.44
PCF11-201ENST00000298281 CCZ1P86791 482 aaPredicted RBP12.27□□□□□ -0.44
PCF11-201ENST00000298281 SQLEQ14534 574 aa12.27□□□□□ -0.44
PCF11-201ENST00000298281 SLC45A4Q5BKX6 768 aa12.27□□□□□ -0.44
PCF11-201ENST00000298281 BNC2Q6ZN30 1099 aaPredicted RBP12.27□□□□□ -0.44
PCF11-201ENST00000298281 ATP8B4Q8TF62 1192 aa12.27□□□□□ -0.44
PCF11-201ENST00000298281 RIMKLBQ9ULI2 386 aa12.27□□□□□ -0.44
PCF11-201ENST00000298281 GIT1Q9Y2X7 761 aa12.27□□□□□ -0.44
PCF11-201ENST00000298281 OR10H1Q9Y4A9 318 aa12.27□□□□□ -0.44
PCF11-201ENST00000298281 ABHD14A-ACY1A0A1B0GW23 586 aa12.27□□□□□ -0.45
PCF11-201ENST00000298281 NCK1P16333 377 aa12.27□□□□□ -0.45
PCF11-201ENST00000298281 TCEA1P23193 301 aaKnown RBP12.27□□□□□ -0.45
PCF11-201ENST00000298281 SP100P23497 879 aaPredicted RBP12.27□□□□□ -0.45
PCF11-201ENST00000298281 TKTP29401 623 aaKnown RBP12.27□□□□□ -0.45
PCF11-201ENST00000298281 SLC7A2P52569 658 aa12.27□□□□□ -0.45
PCF11-201ENST00000298281 CASP9P55211 416 aa12.27□□□□□ -0.45
PCF11-201ENST00000298281 TCEAL6Q6IPX3 200 aa12.27□□□□□ -0.45
PCF11-201ENST00000298281 PRMT9Q6P2P2 845 aa12.27□□□□□ -0.45
PCF11-201ENST00000298281 EHD3Q9NZN3 535 aa12.27□□□□□ -0.45
PCF11-201ENST00000298281 GYPCP04921 128 aa12.27□□□□□ -0.45
PCF11-201ENST00000298281 IRAK1P51617 712 aa12.27□□□□□ -0.45
PCF11-201ENST00000298281 ZNF483Q8TF39 744 aaPredicted RBP12.27□□□□□ -0.45
PCF11-201ENST00000298281 SH2D3AQ9BRG2 576 aa12.27□□□□□ -0.45
PCF11-201ENST00000298281 TRIM36Q9NQ86 728 aa12.27□□□□□ -0.45
PCF11-201ENST00000298281 SLC24A2Q9UI40 661 aa12.27□□□□□ -0.45
PCF11-201ENST00000298281 MPZL3Q6UWV2 235 aa12.27□□□□□ -0.45
PCF11-201ENST00000298281 FIG4Q92562 907 aa12.27□□□□□ -0.45
PCF11-201ENST00000298281 MED14O60244 1454 aa12.27□□□□□ -0.45
PCF11-201ENST00000298281 CNTNAP5Q8WYK1 1306 aa12.27□□□□□ -0.45
PCF11-201ENST00000298281 GLP2RO95838 553 aa12.26□□□□□ -0.45
PCF11-201ENST00000298281 GHRP10912 638 aa12.26□□□□□ -0.45
PCF11-201ENST00000298281 RARGP13631 454 aa12.26□□□□□ -0.45
PCF11-201ENST00000298281 AXLP30530 894 aa12.26□□□□□ -0.45
PCF11-201ENST00000298281 GPR15P49685 360 aa12.26□□□□□ -0.45
PCF11-201ENST00000298281 NR6A1Q15406 480 aa12.26□□□□□ -0.45
PCF11-201ENST00000298281 STOX1Q6ZVD7 989 aa12.26□□□□□ -0.45
PCF11-201ENST00000298281 BRINP2Q9C0B6 783 aa12.26□□□□□ -0.45
PCF11-201ENST00000298281 KANSL3Q9P2N6 904 aa12.26□□□□□ -0.45
PCF11-201ENST00000298281 ACOT9Q9Y305 439 aa12.26□□□□□ -0.45
PCF11-201ENST00000298281 C1orf232A0A0U1RR37 186 aa12.26□□□□□ -0.45
PCF11-201ENST00000298281 RB1P06400 928 aa12.26□□□□□ -0.45
PCF11-201ENST00000298281 TFPIP10646 304 aa12.26□□□□□ -0.45
PCF11-201ENST00000298281 KLRC1P26715 233 aa12.26□□□□□ -0.45
PCF11-201ENST00000298281 HSD17B3P37058 310 aa12.26□□□□□ -0.45
PCF11-201ENST00000298281 KCNJ1P48048 391 aa12.26□□□□□ -0.45
PCF11-201ENST00000298281 C1orf189Q5VU69 101 aa12.26□□□□□ -0.45
PCF11-201ENST00000298281 RAP1GAP2Q684P5 730 aa12.26□□□□□ -0.45
PCF11-201ENST00000298281 NEK5Q6P3R8 708 aa12.26□□□□□ -0.45
PCF11-201ENST00000298281 DPF2Q92785 391 aa12.26□□□□□ -0.45
PCF11-201ENST00000298281 GPRC5DQ9NZD1 345 aa12.26□□□□□ -0.45
PCF11-201ENST00000298281 TCHHQ07283 1943 aa12.26□□□□□ -0.45
PCF11-201ENST00000298281 MYH7P12883 1935 aa12.26□□□□□ -0.45
PCF11-201ENST00000298281 CCNT2O60583 730 aaKnown RBP12.26□□□□□ -0.45
PCF11-201ENST00000298281 CALB2P22676 271 aa12.26□□□□□ -0.45
PCF11-201ENST00000298281 MYBPC3Q14896 1274 aa12.26□□□□□ -0.45
PCF11-201ENST00000298281 PRR5LQ6MZQ0 368 aa12.26□□□□□ -0.45
PCF11-201ENST00000298281 TMC7Q7Z402 723 aa12.26□□□□□ -0.45
PCF11-201ENST00000298281 MIB1Q86YT6 1006 aa12.26□□□□□ -0.45
PCF11-201ENST00000298281 ZNF34Q8IZ26 560 aa12.26□□□□□ -0.45
PCF11-201ENST00000298281 ZNF615Q8N8J6 731 aa12.26□□□□□ -0.45
PCF11-201ENST00000298281 ATP6V1C2Q8NEY4 427 aa12.26□□□□□ -0.45
PCF11-201ENST00000298281 OR2L3Q8NG85 312 aa12.26□□□□□ -0.45
PCF11-201ENST00000298281 NKD1Q969G9 470 aa12.26□□□□□ -0.45
PCF11-201ENST00000298281 FAM111AQ96PZ2 611 aa12.26□□□□□ -0.45
PCF11-201ENST00000298281 DEFB129Q9H1M3 183 aa12.26□□□□□ -0.45
PCF11-201ENST00000298281 ACTR8Q9H981 624 aa12.26□□□□□ -0.45
PCF11-201ENST00000298281 GPR75-ASB3A0A0A6YYF3 556 aa12.26□□□□□ -0.45
PCF11-201ENST00000298281 O00370 1275 aa12.26□□□□□ -0.45
PCF11-201ENST00000298281 FKBP6O75344 327 aa12.26□□□□□ -0.45
PCF11-201ENST00000298281 CHRNGP07510 517 aa12.26□□□□□ -0.45
PCF11-201ENST00000298281 EPS8Q12929 822 aa12.26□□□□□ -0.45
PCF11-201ENST00000298281 OCLNQ16625 522 aa12.26□□□□□ -0.45
PCF11-201ENST00000298281 TMEM237Q96Q45 408 aa12.26□□□□□ -0.45
PCF11-201ENST00000298281 THP07101 528 aa12.26□□□□□ -0.45
PCF11-201ENST00000298281 ANXA5P08758 320 aa12.26□□□□□ -0.45
PCF11-201ENST00000298281 ATXN1P54253 815 aaKnown RBP12.26□□□□□ -0.45
PCF11-201ENST00000298281 HUNKP57058 714 aa12.26□□□□□ -0.45
PCF11-201ENST00000298281 CCNG2Q16589 344 aa12.26□□□□□ -0.45
PCF11-201ENST00000298281 SLC16A10Q8TF71 515 aa12.26□□□□□ -0.45
PCF11-201ENST00000298281 ANKRD27Q96NW4 1050 aa12.26□□□□□ -0.45
PCF11-201ENST00000298281 DCLRE1BQ9H816 532 aa12.26□□□□□ -0.45
PCF11-201ENST00000298281 KLK14Q9P0G3 267 aa12.26□□□□□ -0.45
PCF11-201ENST00000298281 ZNF214Q9UL59 606 aaPredicted RBP12.26□□□□□ -0.45
PCF11-201ENST00000298281 NKRFO15226 690 aaKnown RBP eCLIP12.26□□□□□ -0.45
PCF11-201ENST00000298281 DENND6BQ8NEG7 585 aa12.26□□□□□ -0.45
PCF11-201ENST00000298281 FAM120BQ96EK7 910 aaKnown RBP12.26□□□□□ -0.45
PCF11-201ENST00000298281 SLC2A4P14672 509 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms