RNA–Protein interactions for RNA: ENST00000294816.6

LMX1A-201, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-201ENST00000294816 ANKRD36BP1Q96IX9 119 aa10.48□□□□□ -0.73
LMX1A-201ENST00000294816 SLC29A1Q99808 456 aa10.48□□□□□ -0.73
LMX1A-201ENST00000294816 TUT1Q9H6E5 874 aaKnown RBP10.48□□□□□ -0.73
LMX1A-201ENST00000294816 INIPQ9NRY2 104 aa10.48□□□□□ -0.73
LMX1A-201ENST00000294816 PNPLA3Q9NST1 481 aa10.48□□□□□ -0.73
LMX1A-201ENST00000294816 FAM49BQ9NUQ9 324 aa10.48□□□□□ -0.73
LMX1A-201ENST00000294816 SYBUQ9NX95 663 aa10.48□□□□□ -0.73
LMX1A-201ENST00000294816 CDYLQ9Y232 598 aa10.48□□□□□ -0.73
LMX1A-201ENST00000294816 BCLAF3A2AJT9 711 aaKnown RBP10.48□□□□□ -0.73
LMX1A-201ENST00000294816 TMEM221A6NGB7 291 aa10.48□□□□□ -0.73
LMX1A-201ENST00000294816 H3BNH8 94 aa10.48□□□□□ -0.73
LMX1A-201ENST00000294816 AKAP10O43572 662 aa10.48□□□□□ -0.73
LMX1A-201ENST00000294816 USP12O75317 370 aa10.48□□□□□ -0.73
LMX1A-201ENST00000294816 STBD1O95210 358 aa10.48□□□□□ -0.73
LMX1A-201ENST00000294816 NAMPTP43490 491 aa10.48□□□□□ -0.73
LMX1A-201ENST00000294816 C21orf59P57076 290 aa10.48□□□□□ -0.73
LMX1A-201ENST00000294816 GPR107Q5VW38 600 aa10.48□□□□□ -0.73
LMX1A-201ENST00000294816 LRRC8EQ6NSJ5 796 aa10.48□□□□□ -0.73
LMX1A-201ENST00000294816 LRRC43Q8N309 656 aa10.48□□□□□ -0.73
LMX1A-201ENST00000294816 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.48□□□□□ -0.73
LMX1A-201ENST00000294816 TMEM102Q8N9M5 508 aaPredicted RBP10.48□□□□□ -0.73
LMX1A-201ENST00000294816 CCNYQ8ND76 341 aa10.48□□□□□ -0.73
LMX1A-201ENST00000294816 TASP1Q9H6P5 420 aa10.48□□□□□ -0.73
LMX1A-201ENST00000294816 PDLIM7Q9NR12 457 aa10.48□□□□□ -0.73
LMX1A-201ENST00000294816 TBCCD1Q9NVR7 557 aa10.48□□□□□ -0.73
LMX1A-201ENST00000294816 FZD1Q9UP38 647 aa10.48□□□□□ -0.73
LMX1A-201ENST00000294816 COQ6Q9Y2Z9 468 aa10.48□□□□□ -0.73
LMX1A-201ENST00000294816 STYXL1Q9Y6J8 313 aa10.48□□□□□ -0.73
LMX1A-201ENST00000294816 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.48□□□□□ -0.73
LMX1A-201ENST00000294816 GOLGA8TH3BQL2 631 aa10.48□□□□□ -0.73
LMX1A-201ENST00000294816 CBFA2T3O75081 653 aa10.48□□□□□ -0.73
LMX1A-201ENST00000294816 TIPRLO75663 272 aa10.48□□□□□ -0.73
LMX1A-201ENST00000294816 BCAS2O75934 225 aaPredicted RBP10.48□□□□□ -0.73
LMX1A-201ENST00000294816 ZBTB11O95625 1053 aaPredicted RBP10.48□□□□□ -0.73
LMX1A-201ENST00000294816 COL6A2P12110 1019 aa10.48□□□□□ -0.73
LMX1A-201ENST00000294816 ALOX15P16050 662 aaPredicted RBP10.48□□□□□ -0.73
LMX1A-201ENST00000294816 ZNF26P17031 533 aaPredicted RBP10.48□□□□□ -0.73
LMX1A-201ENST00000294816 HMOX2P30519 316 aa10.48□□□□□ -0.73
LMX1A-201ENST00000294816 SDC4P31431 198 aa10.48□□□□□ -0.73
LMX1A-201ENST00000294816 PPARGP37231 505 aaPredicted RBP10.48□□□□□ -0.73
LMX1A-201ENST00000294816 GP5P40197 560 aa10.48□□□□□ -0.73
LMX1A-201ENST00000294816 COLGALT1Q8NBJ5 622 aa10.48□□□□□ -0.73
LMX1A-201ENST00000294816 DDHD1Q8NEL9 900 aa10.48□□□□□ -0.73
LMX1A-201ENST00000294816 ISOC1Q96CN7 298 aa10.48□□□□□ -0.73
LMX1A-201ENST00000294816 COX4I2Q96KJ9 171 aa10.48□□□□□ -0.73
LMX1A-201ENST00000294816 TSNARE1Q96NA8 513 aa10.48□□□□□ -0.73
LMX1A-201ENST00000294816 ACO2Q99798 780 aaKnown RBP10.48□□□□□ -0.73
LMX1A-201ENST00000294816 OSBPL11Q9BXB4 747 aa10.48□□□□□ -0.73
LMX1A-201ENST00000294816 RNF146Q9NTX7 359 aa10.48□□□□□ -0.73
LMX1A-201ENST00000294816 MFHAS1Q9Y4C4 1052 aa10.48□□□□□ -0.73
LMX1A-201ENST00000294816 COL16A1Q07092 1604 aaPredicted RBP10.47□□□□□ -0.73
LMX1A-201ENST00000294816 KCNU1A8MYU2 1149 aa10.47□□□□□ -0.73
LMX1A-201ENST00000294816 J3QRK9 145 aa10.47□□□□□ -0.73
LMX1A-201ENST00000294816 HDAC3O15379 428 aa10.47□□□□□ -0.73
LMX1A-201ENST00000294816 ATG7O95352 703 aa10.47□□□□□ -0.73
LMX1A-201ENST00000294816 PORP16435 677 aaPredicted RBP10.47□□□□□ -0.73
LMX1A-201ENST00000294816 GLDCP23378 1020 aa10.47□□□□□ -0.73
LMX1A-201ENST00000294816 IL4RP24394 825 aa10.47□□□□□ -0.73
LMX1A-201ENST00000294816 AVPR1AP37288 418 aa10.47□□□□□ -0.73
LMX1A-201ENST00000294816 ATXN1P54253 815 aaKnown RBP10.47□□□□□ -0.73
LMX1A-201ENST00000294816 NAGLUP54802 743 aa10.47□□□□□ -0.73
LMX1A-201ENST00000294816 CCDC153Q494R4 210 aa10.47□□□□□ -0.73
LMX1A-201ENST00000294816 GLRA4Q5JXX5 417 aa10.47□□□□□ -0.73
LMX1A-201ENST00000294816 STXBP5Q5T5C0 1151 aa10.47□□□□□ -0.73
LMX1A-201ENST00000294816 HERC6Q8IVU3 1022 aa10.47□□□□□ -0.73
LMX1A-201ENST00000294816 FBXL8Q96CD0 374 aa10.47□□□□□ -0.73
LMX1A-201ENST00000294816 LGMNQ99538 433 aa10.47□□□□□ -0.73
LMX1A-201ENST00000294816 SLC2A11Q9BYW1 496 aa10.47□□□□□ -0.73
LMX1A-201ENST00000294816 ELOVL4Q9GZR5 314 aa10.47□□□□□ -0.73
LMX1A-201ENST00000294816 PORCNQ9H237 461 aa10.47□□□□□ -0.73
LMX1A-201ENST00000294816 LHX5Q9H2C1 402 aa10.47□□□□□ -0.73
LMX1A-201ENST00000294816 RMI1Q9H9A7 625 aa10.47□□□□□ -0.73
LMX1A-201ENST00000294816 CLK4Q9HAZ1 481 aaKnown RBP10.47□□□□□ -0.73
LMX1A-201ENST00000294816 TRNAU1APQ9NX07 287 aaKnown RBP10.47□□□□□ -0.73
LMX1A-201ENST00000294816 PADI4Q9UM07 663 aa10.47□□□□□ -0.73
LMX1A-201ENST00000294816 ZNF839A8K0R7 811 aa10.47□□□□□ -0.73
LMX1A-201ENST00000294816 TK2O00142 265 aa10.47□□□□□ -0.73
LMX1A-201ENST00000294816 TRIM38O00635 465 aa10.47□□□□□ -0.73
LMX1A-201ENST00000294816 NPR1P16066 1061 aa10.47□□□□□ -0.73
LMX1A-201ENST00000294816 RXRGP48443 463 aa10.47□□□□□ -0.73
LMX1A-201ENST00000294816 RPL14P50914 215 aaKnown RBP10.47□□□□□ -0.73
LMX1A-201ENST00000294816 PSME3P61289 254 aa10.47□□□□□ -0.73
LMX1A-201ENST00000294816 RELAQ04206 551 aa10.47□□□□□ -0.73
LMX1A-201ENST00000294816 NIPAL4Q0D2K0 466 aa10.47□□□□□ -0.73
LMX1A-201ENST00000294816 PDK2Q15119 407 aa10.47□□□□□ -0.73
LMX1A-201ENST00000294816 CCDC92Q53HC0 331 aaPredicted RBP10.47□□□□□ -0.73
LMX1A-201ENST00000294816 BOLA3Q53S33 107 aa10.47□□□□□ -0.73
LMX1A-201ENST00000294816 ARL13AQ5H913 290 aaPredicted RBP10.47□□□□□ -0.73
LMX1A-201ENST00000294816 METTL21CQ5VZV1 264 aa10.47□□□□□ -0.73
LMX1A-201ENST00000294816 RSBN1LQ6PCB5 846 aaPredicted RBP10.47□□□□□ -0.73
LMX1A-201ENST00000294816 FIBCD1Q8N539 461 aa10.47□□□□□ -0.73
LMX1A-201ENST00000294816 RDM1Q8NG50 284 aa10.47□□□□□ -0.73
LMX1A-201ENST00000294816 MCRS1Q96EZ8 462 aa10.47□□□□□ -0.73
LMX1A-201ENST00000294816 APBA2Q99767 749 aa10.47□□□□□ -0.73
LMX1A-201ENST00000294816 NMRAL1Q9HBL8 299 aa10.47□□□□□ -0.73
LMX1A-201ENST00000294816 ZNF302Q9NR11 478 aa10.47□□□□□ -0.73
LMX1A-201ENST00000294816 SLC39A10Q9ULF5 831 aa10.47□□□□□ -0.73
LMX1A-201ENST00000294816 AURKCQ9UQB9 309 aa10.47□□□□□ -0.73
LMX1A-201ENST00000294816 WDR37Q9Y2I8 494 aa10.47□□□□□ -0.73
LMX1A-201ENST00000294816 SYNJ2BP-COX16A0A087WUM0 186 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms