RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 TCAF2A6NFQ2 919 aa19.41■□□□□ 0.7
PDLIM3-202ENST00000284770 SLC9A3R1O14745 358 aaPredicted RBP19.41■□□□□ 0.7
PDLIM3-202ENST00000284770 MX2P20592 715 aa19.41■□□□□ 0.7
PDLIM3-202ENST00000284770 OR1E1P30953 314 aa19.41■□□□□ 0.7
PDLIM3-202ENST00000284770 NDST2P52849 883 aa19.41■□□□□ 0.7
PDLIM3-202ENST00000284770 GALNT2Q10471 571 aa19.41■□□□□ 0.7
PDLIM3-202ENST00000284770 MPPE1Q53F39 396 aa19.41■□□□□ 0.7
PDLIM3-202ENST00000284770 MPP7Q5T2T1 576 aa19.41■□□□□ 0.7
PDLIM3-202ENST00000284770 DARS2Q6PI48 645 aaKnown RBP19.41■□□□□ 0.7
PDLIM3-202ENST00000284770 CCNI2Q6ZMN8 369 aaPredicted RBP19.41■□□□□ 0.7
PDLIM3-202ENST00000284770 ARHGAP12Q8IWW6 846 aa19.41■□□□□ 0.7
PDLIM3-202ENST00000284770 IFT20Q8IY31 132 aa19.41■□□□□ 0.7
PDLIM3-202ENST00000284770 DEFB123Q8N688 67 aa19.41■□□□□ 0.7
PDLIM3-202ENST00000284770 CCDC114Q96M63 670 aa19.41■□□□□ 0.7
PDLIM3-202ENST00000284770 TMEM121Q9BTD3 319 aa19.41■□□□□ 0.7
PDLIM3-202ENST00000284770 ARGLU1Q9NWB6 273 aaPredicted RBP19.41■□□□□ 0.7
PDLIM3-202ENST00000284770 USP15Q9Y4E8 981 aaPredicted RBP19.41■□□□□ 0.7
PDLIM3-202ENST00000284770 DOCK4Q8N1I0 1966 aa19.4■□□□□ 0.7
PDLIM3-202ENST00000284770 BCLAF3A2AJT9 711 aaKnown RBP19.4■□□□□ 0.7
PDLIM3-202ENST00000284770 HACD1B0YJ81 288 aa19.4■□□□□ 0.7
PDLIM3-202ENST00000284770 H3BQ06 376 aaPredicted RBP19.4■□□□□ 0.7
PDLIM3-202ENST00000284770 PPP1R12AO14974 1030 aaPredicted RBP19.4■□□□□ 0.7
PDLIM3-202ENST00000284770 TBL1XO60907 577 aa19.4■□□□□ 0.7
PDLIM3-202ENST00000284770 ECEL1O95672 775 aa19.4■□□□□ 0.7
PDLIM3-202ENST00000284770 MYBL2P10244 700 aa19.4■□□□□ 0.7
PDLIM3-202ENST00000284770 LAMP2P13473 410 aa19.4■□□□□ 0.7
PDLIM3-202ENST00000284770 FOSL2P15408 326 aa19.4■□□□□ 0.7
PDLIM3-202ENST00000284770 GBP2P32456 591 aaPredicted RBP19.4■□□□□ 0.7
PDLIM3-202ENST00000284770 TRADDQ15628 312 aa19.4■□□□□ 0.7
PDLIM3-202ENST00000284770 SLC45A4Q5BKX6 768 aa19.4■□□□□ 0.7
PDLIM3-202ENST00000284770 BPIFB1Q8TDL5 484 aa19.4■□□□□ 0.7
PDLIM3-202ENST00000284770 TFB1MQ8WVM0 346 aaKnown RBP19.4■□□□□ 0.7
PDLIM3-202ENST00000284770 HNRNPLLQ8WVV9 542 aaKnown RBP19.4■□□□□ 0.7
PDLIM3-202ENST00000284770 CASKIN2Q8WXE0 1202 aa19.4■□□□□ 0.7
PDLIM3-202ENST00000284770 SLC39A8Q9C0K1 460 aa19.4■□□□□ 0.7
PDLIM3-202ENST00000284770 BRD8Q9H0E9 1235 aa19.4■□□□□ 0.7
PDLIM3-202ENST00000284770 LINC00597Q9H2U6 94 aa19.4■□□□□ 0.7
PDLIM3-202ENST00000284770 NOL6Q9H6R4 1146 aaKnown RBP19.4■□□□□ 0.7
PDLIM3-202ENST00000284770 ZFP14Q9HCL3 533 aa19.4■□□□□ 0.7
PDLIM3-202ENST00000284770 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.39■□□□□ 0.7
PDLIM3-202ENST00000284770 FCARP24071 287 aa19.39■□□□□ 0.7
PDLIM3-202ENST00000284770 STIP1P31948 543 aaKnown RBP19.39■□□□□ 0.7
PDLIM3-202ENST00000284770 GARSP41250 739 aaKnown RBP19.39■□□□□ 0.7
PDLIM3-202ENST00000284770 ZNF177Q13360 481 aaPredicted RBP19.39■□□□□ 0.7
PDLIM3-202ENST00000284770 DUPD1Q68J44 220 aa19.39■□□□□ 0.7
PDLIM3-202ENST00000284770 TPGS1Q6ZTW0 290 aa19.39■□□□□ 0.7
PDLIM3-202ENST00000284770 CDKL3Q8IVW4 592 aaPredicted RBP19.39■□□□□ 0.7
PDLIM3-202ENST00000284770 ADGRG2Q8IZP9 1017 aa19.39■□□□□ 0.7
PDLIM3-202ENST00000284770 ALLCQ8N6M5 410 aa19.39■□□□□ 0.7
PDLIM3-202ENST00000284770 DDI1Q8WTU0 396 aa19.39■□□□□ 0.7
PDLIM3-202ENST00000284770 E2F7Q96AV8 911 aa19.39■□□□□ 0.7
PDLIM3-202ENST00000284770 QKIQ96PU8 341 aaKnown RBP eCLIP19.39■□□□□ 0.7
PDLIM3-202ENST00000284770 LGMNQ99538 433 aa19.39■□□□□ 0.7
PDLIM3-202ENST00000284770 ERP44Q9BS26 406 aa19.39■□□□□ 0.7
PDLIM3-202ENST00000284770 UBE2ZQ9H832 354 aaPredicted RBP19.39■□□□□ 0.7
PDLIM3-202ENST00000284770 C10orf88Q9H8K7 445 aa19.39■□□□□ 0.7
PDLIM3-202ENST00000284770 UTP11Q9Y3A2 253 aaKnown RBP19.39■□□□□ 0.7
PDLIM3-202ENST00000284770 NEU2Q9Y3R4 380 aa19.39■□□□□ 0.7
PDLIM3-202ENST00000284770 HEPACAM2A8MVW5 462 aa19.39■□□□□ 0.69
PDLIM3-202ENST00000284770 DFFAO00273 331 aa19.39■□□□□ 0.69
PDLIM3-202ENST00000284770 GAS8O95995 478 aa19.39■□□□□ 0.69
PDLIM3-202ENST00000284770 CYBBP04839 570 aa19.39■□□□□ 0.69
PDLIM3-202ENST00000284770 KCNA5P22460 613 aa19.39■□□□□ 0.69
PDLIM3-202ENST00000284770 CARSP49589 748 aaKnown RBP19.39■□□□□ 0.69
PDLIM3-202ENST00000284770 YBEYP58557 167 aaPredicted RBP19.39■□□□□ 0.69
PDLIM3-202ENST00000284770 C6orf118Q5T5N4 469 aa19.39■□□□□ 0.69
PDLIM3-202ENST00000284770 TANGO2Q6ICL3 276 aa19.39■□□□□ 0.69
PDLIM3-202ENST00000284770 B4GALNT4Q76KP1 1039 aa19.39■□□□□ 0.69
PDLIM3-202ENST00000284770 GSTA5Q7RTV2 222 aa19.39■□□□□ 0.69
PDLIM3-202ENST00000284770 SETD3Q86TU7 594 aaPredicted RBP19.39■□□□□ 0.69
PDLIM3-202ENST00000284770 LRRC49Q8IUZ0 686 aa19.39■□□□□ 0.69
PDLIM3-202ENST00000284770 CCNYQ8ND76 341 aa19.39■□□□□ 0.69
PDLIM3-202ENST00000284770 LRRN4Q8WUT4 740 aa19.39■□□□□ 0.69
PDLIM3-202ENST00000284770 OSCP1Q8WVF1 389 aa19.39■□□□□ 0.69
PDLIM3-202ENST00000284770 HDAC11Q96DB2 347 aa19.39■□□□□ 0.69
PDLIM3-202ENST00000284770 P2RY11Q96G91 374 aa19.39■□□□□ 0.69
PDLIM3-202ENST00000284770 RAB17Q9H0T7 212 aa19.39■□□□□ 0.69
PDLIM3-202ENST00000284770 USP29Q9HBJ7 922 aa19.39■□□□□ 0.69
PDLIM3-202ENST00000284770 TBC1D30Q9Y2I9 924 aa19.39■□□□□ 0.69
PDLIM3-202ENST00000284770 WNT6Q9Y6F9 365 aa19.39■□□□□ 0.69
PDLIM3-202ENST00000284770 CFAP69A5D8W1 941 aa19.38■□□□□ 0.69
PDLIM3-202ENST00000284770 SGK1O00141 431 aa19.38■□□□□ 0.69
PDLIM3-202ENST00000284770 RAMP2O60895 175 aa19.38■□□□□ 0.69
PDLIM3-202ENST00000284770 RBL1P28749 1068 aa19.38■□□□□ 0.69
PDLIM3-202ENST00000284770 PPIDQ08752 370 aaKnown RBP19.38■□□□□ 0.69
PDLIM3-202ENST00000284770 PRKD1Q15139 912 aaPredicted RBP19.38■□□□□ 0.69
PDLIM3-202ENST00000284770 SKIV2LQ15477 1246 aaKnown RBP19.38■□□□□ 0.69
PDLIM3-202ENST00000284770 PARP15Q460N3 678 aa19.38■□□□□ 0.69
PDLIM3-202ENST00000284770 SYDE1Q6ZW31 735 aaPredicted RBP19.38■□□□□ 0.69
PDLIM3-202ENST00000284770 RSAD2Q8WXG1 361 aa19.38■□□□□ 0.69
PDLIM3-202ENST00000284770 IRF7Q92985 503 aa19.38■□□□□ 0.69
PDLIM3-202ENST00000284770 SPHK2Q9NRA0 654 aa19.38■□□□□ 0.69
PDLIM3-202ENST00000284770 DUS2Q9NX74 493 aaKnown RBP19.38■□□□□ 0.69
PDLIM3-202ENST00000284770 RASA4BC9J798 803 aa19.37■□□□□ 0.69
PDLIM3-202ENST00000284770 RASA4O43374 803 aa19.37■□□□□ 0.69
PDLIM3-202ENST00000284770 LUC7L3O95232 432 aaKnown RBP19.37■□□□□ 0.69
PDLIM3-202ENST00000284770 HOXD9P28356 352 aaPredicted RBP19.37■□□□□ 0.69
PDLIM3-202ENST00000284770 PAPOLAP51003 745 aaKnown RBP19.37■□□□□ 0.69
PDLIM3-202ENST00000284770 ZNF33AQ06730 810 aa19.37■□□□□ 0.69
PDLIM3-202ENST00000284770 AP1B1Q10567 949 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms