RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 DPYSL2Q16555 572 aa13.11□□□□□ -0.31
SS18-202ENST00000269138 PLEKHG6Q3KR16 790 aa13.11□□□□□ -0.31
SS18-202ENST00000269138 AHI1Q8N157 1196 aa13.11□□□□□ -0.31
SS18-202ENST00000269138 SPEM1Q8N4L4 309 aa13.11□□□□□ -0.31
SS18-202ENST00000269138 ZNF513Q8N8E2 541 aaPredicted RBP13.11□□□□□ -0.31
SS18-202ENST00000269138 ZNF557Q8N988 423 aaPredicted RBP13.11□□□□□ -0.31
SS18-202ENST00000269138 TXNDC5Q8NBS9 432 aaKnown RBP13.11□□□□□ -0.31
SS18-202ENST00000269138 TTC17Q96AE7 1141 aa13.11□□□□□ -0.31
SS18-202ENST00000269138 ERLEC1Q96DZ1 483 aa13.11□□□□□ -0.31
SS18-202ENST00000269138 FEM1AQ9BSK4 669 aa13.11□□□□□ -0.31
SS18-202ENST00000269138 PCDH18Q9HCL0 1135 aa13.11□□□□□ -0.31
SS18-202ENST00000269138 TMEM248Q9NWD8 314 aa13.11□□□□□ -0.31
SS18-202ENST00000269138 DNAI1Q9UI46 699 aa13.11□□□□□ -0.31
SS18-202ENST00000269138 MACROD2A1Z1Q3 448 aa13.1□□□□□ -0.31
SS18-202ENST00000269138 CHURC1-FNTBB4DL54 471 aa13.1□□□□□ -0.31
SS18-202ENST00000269138 SGK1O00141 431 aa13.1□□□□□ -0.31
SS18-202ENST00000269138 TIMM44O43615 452 aa13.1□□□□□ -0.31
SS18-202ENST00000269138 ADAM23O75077 832 aa13.1□□□□□ -0.31
SS18-202ENST00000269138 MOCS3O95396 460 aa13.1□□□□□ -0.31
SS18-202ENST00000269138 HNRNPLP14866 589 aaKnown RBP eCLIP13.1□□□□□ -0.313e-8■■■■□ 22.8
SS18-202ENST00000269138 POLR2EP19388 210 aaKnown RBP13.1□□□□□ -0.31
SS18-202ENST00000269138 MAGEA9P43362 315 aa13.1□□□□□ -0.31
SS18-202ENST00000269138 PLK1P53350 603 aa13.1□□□□□ -0.31
SS18-202ENST00000269138 CDH6P55285 790 aa13.1□□□□□ -0.31
SS18-202ENST00000269138 SATB1Q01826 763 aa13.1□□□□□ -0.31
SS18-202ENST00000269138 MMRN1Q13201 1228 aa13.1□□□□□ -0.31
SS18-202ENST00000269138 PTPRNQ16849 979 aa13.1□□□□□ -0.31
SS18-202ENST00000269138 RFX8Q6ZV50 586 aa13.1□□□□□ -0.31
SS18-202ENST00000269138 POLNQ7Z5Q5 900 aa13.1□□□□□ -0.31
SS18-202ENST00000269138 SETD3Q86TU7 594 aaPredicted RBP13.1□□□□□ -0.31
SS18-202ENST00000269138 PIAS4Q8N2W9 510 aaPredicted RBP13.1□□□□□ -0.31
SS18-202ENST00000269138 RTL3Q8N8U3 475 aaKnown RBP13.1□□□□□ -0.31
SS18-202ENST00000269138 NETO2Q8NC67 525 aa13.1□□□□□ -0.31
SS18-202ENST00000269138 OR7D4Q8NG98 312 aa13.1□□□□□ -0.31
SS18-202ENST00000269138 PSMB7Q99436 277 aa13.1□□□□□ -0.31
SS18-202ENST00000269138 MUC3BQ9H195 1237 aa13.1□□□□□ -0.31
SS18-202ENST00000269138 NOL6Q9H6R4 1146 aaKnown RBP13.1□□□□□ -0.31
SS18-202ENST00000269138 CACNA2D2Q9NY47 1150 aa13.1□□□□□ -0.31
SS18-202ENST00000269138 THAP10Q9P2Z0 257 aaPredicted RBP13.1□□□□□ -0.31
SS18-202ENST00000269138 MFHAS1Q9Y4C4 1052 aa13.1□□□□□ -0.31
SS18-202ENST00000269138 GRID2IPA4D2P6 1211 aa13.09□□□□□ -0.31
SS18-202ENST00000269138 WASH4PA8MWX3 477 aa13.09□□□□□ -0.31
SS18-202ENST00000269138 SPOPO43791 374 aa13.09□□□□□ -0.31
SS18-202ENST00000269138 SNAP91O60641 907 aa13.09□□□□□ -0.31
SS18-202ENST00000269138 AMPD1P23109 780 aa13.09□□□□□ -0.31
SS18-202ENST00000269138 GLDCP23378 1020 aa13.09□□□□□ -0.31
SS18-202ENST00000269138 IL4RP24394 825 aa13.09□□□□□ -0.31
SS18-202ENST00000269138 ACVRL1P37023 503 aa13.09□□□□□ -0.31
SS18-202ENST00000269138 SLC1A1P43005 524 aa13.09□□□□□ -0.31
SS18-202ENST00000269138 SLC12A1Q13621 1099 aa13.09□□□□□ -0.31
SS18-202ENST00000269138 DPYSQ14117 519 aa13.09□□□□□ -0.31
SS18-202ENST00000269138 KRT81Q14533 505 aa13.09□□□□□ -0.31
SS18-202ENST00000269138 DMC1Q14565 340 aa13.09□□□□□ -0.31
SS18-202ENST00000269138 ZNF234Q14588 700 aa13.09□□□□□ -0.31
SS18-202ENST00000269138 EIF4HQ15056 248 aaKnown RBP13.09□□□□□ -0.31
SS18-202ENST00000269138 C6orf118Q5T5N4 469 aa13.09□□□□□ -0.31
SS18-202ENST00000269138 C11orf63Q6NUN7 778 aa13.09□□□□□ -0.31
SS18-202ENST00000269138 DAAM2Q86T65 1068 aa13.09□□□□□ -0.31
SS18-202ENST00000269138 C1orf210Q8IVY1 113 aa13.09□□□□□ -0.31
SS18-202ENST00000269138 CHPFQ8IZ52 775 aa13.09□□□□□ -0.31
SS18-202ENST00000269138 MAML2Q8IZL2 1156 aaPredicted RBP13.09□□□□□ -0.31
SS18-202ENST00000269138 FAM71BQ8TC56 605 aa13.09□□□□□ -0.31
SS18-202ENST00000269138 KCNV2Q8TDN2 545 aa13.09□□□□□ -0.31
SS18-202ENST00000269138 RAPGEF5Q92565 580 aa13.09□□□□□ -0.31
SS18-202ENST00000269138 TSC1Q92574 1164 aa13.09□□□□□ -0.31
SS18-202ENST00000269138 CSPG4P5Q96PW8 444 aa13.09□□□□□ -0.31
SS18-202ENST00000269138 SPON2Q9BUD6 331 aa13.09□□□□□ -0.31
SS18-202ENST00000269138 VPS28Q9UK41 221 aa13.09□□□□□ -0.31
SS18-202ENST00000269138 ILVBLA1L0T0 632 aa13.08□□□□□ -0.31
SS18-202ENST00000269138 H3BRJ5 948 aa13.08□□□□□ -0.31
SS18-202ENST00000269138 DAPK3O43293 454 aa13.08□□□□□ -0.31
SS18-202ENST00000269138 NRDCO43847 1150 aa13.08□□□□□ -0.31
SS18-202ENST00000269138 ATG13O75143 517 aa13.08□□□□□ -0.31
SS18-202ENST00000269138 KRT7P08729 469 aa13.08□□□□□ -0.31
SS18-202ENST00000269138 DLDP09622 509 aaKnown RBP13.08□□□□□ -0.31
SS18-202ENST00000269138 ERCC2P18074 760 aa13.08□□□□□ -0.31
SS18-202ENST00000269138 NTSR1P30989 418 aa13.08□□□□□ -0.31
SS18-202ENST00000269138 HTR7P34969 479 aa13.08□□□□□ -0.31
SS18-202ENST00000269138 IL12RB1P42701 662 aa13.08□□□□□ -0.31
SS18-202ENST00000269138 CXCL12P48061 93 aa13.08□□□□□ -0.31
SS18-202ENST00000269138 HCAR3P49019 387 aa13.08□□□□□ -0.31
SS18-202ENST00000269138 MAPKAPK2P49137 400 aa13.08□□□□□ -0.31
SS18-202ENST00000269138 STK19P49842 368 aaPredicted RBP13.08□□□□□ -0.31
SS18-202ENST00000269138 OXCT1P55809 520 aa13.08□□□□□ -0.31
SS18-202ENST00000269138 GNA12Q03113 381 aa13.08□□□□□ -0.31
SS18-202ENST00000269138 DPYSL3Q14195 570 aa13.08□□□□□ -0.31
SS18-202ENST00000269138 TSSK4Q6SA08 328 aa13.08□□□□□ -0.31
SS18-202ENST00000269138 TMEM92Q6UXU6 159 aa13.08□□□□□ -0.31
SS18-202ENST00000269138 ZNF366Q8N895 744 aa13.08□□□□□ -0.31
SS18-202ENST00000269138 LRRC57Q8N9N7 239 aa13.08□□□□□ -0.31
SS18-202ENST00000269138 KCTD6Q8NC69 237 aa13.08□□□□□ -0.31
SS18-202ENST00000269138 CCDC26Q8TAB7 109 aa13.08□□□□□ -0.31
SS18-202ENST00000269138 UCMAQ8WVF2 138 aa13.08□□□□□ -0.31
SS18-202ENST00000269138 RPL10LQ96L21 214 aaKnown RBP13.08□□□□□ -0.31
SS18-202ENST00000269138 MRGPRX3Q96LB0 322 aa13.08□□□□□ -0.31
SS18-202ENST00000269138 KLC2Q9H0B6 622 aa13.08□□□□□ -0.31
SS18-202ENST00000269138 CATSPERBQ9H7T0 1116 aa13.08□□□□□ -0.31
SS18-202ENST00000269138 ETNK2Q9NVF9 386 aa13.08□□□□□ -0.31
SS18-202ENST00000269138 SLCO3A1Q9UIG8 710 aa13.08□□□□□ -0.31
SS18-202ENST00000269138 MMP17Q9ULZ9 603 aa13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms