RNA–Protein interactions for RNA: ENST00000262965.9

TCF3-201, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-201ENST00000262965 PIDD1Q9HB75 910 aa13.81□□□□□ -0.2
TCF3-201ENST00000262965 ITGA11Q9UKX5 1188 aa13.81□□□□□ -0.2
TCF3-201ENST00000262965 CHKBQ9Y259 395 aa13.81□□□□□ -0.2
TCF3-201ENST00000262965 ZMYM2Q9UBW7 1377 aa13.81□□□□□ -0.2
TCF3-201ENST00000262965 F5H5T6 163 aa13.81□□□□□ -0.2
TCF3-201ENST00000262965 CHADO15335 359 aa13.81□□□□□ -0.2
TCF3-201ENST00000262965 USP17L7P0C7H9 530 aa13.81□□□□□ -0.2
TCF3-201ENST00000262965 RGS2P41220 211 aa13.81□□□□□ -0.2
TCF3-201ENST00000262965 ROR2Q01974 943 aaKnown RBP13.81□□□□□ -0.2
TCF3-201ENST00000262965 BNIP1Q12981 228 aa13.81□□□□□ -0.2
TCF3-201ENST00000262965 NPY5RQ15761 445 aa13.81□□□□□ -0.2
TCF3-201ENST00000262965 TTLL9Q3SXZ7 439 aa13.81□□□□□ -0.2
TCF3-201ENST00000262965 SPANXN3Q5MJ09 141 aa13.81□□□□□ -0.2
TCF3-201ENST00000262965 SAMD4BQ5PRF9 694 aaKnown RBP13.81□□□□□ -0.2
TCF3-201ENST00000262965 ANKS6Q68DC2 871 aa13.81□□□□□ -0.2
TCF3-201ENST00000262965 VSIG10LQ86VR7 867 aa13.81□□□□□ -0.2
TCF3-201ENST00000262965 ERO1BQ86YB8 467 aa13.81□□□□□ -0.2
TCF3-201ENST00000262965 OR8H2Q8N162 312 aa13.81□□□□□ -0.2
TCF3-201ENST00000262965 DNAJB3Q8WWF6 145 aa13.81□□□□□ -0.2
TCF3-201ENST00000262965 COPS5Q92905 334 aa13.81□□□□□ -0.2
TCF3-201ENST00000262965 ZFRQ96KR1 1074 aaKnown RBP13.81□□□□□ -0.2
TCF3-201ENST00000262965 BDH2Q9BUT1 245 aa13.81□□□□□ -0.2
TCF3-201ENST00000262965 ALG9Q9H6U8 611 aa13.81□□□□□ -0.2
TCF3-201ENST00000262965 WDR55Q9H6Y2 383 aaPredicted RBP13.81□□□□□ -0.2
TCF3-201ENST00000262965 VPS45Q9NRW7 570 aa13.81□□□□□ -0.2
TCF3-201ENST00000262965 A0A0A0MRY4 1105 aa13.81□□□□□ -0.2
TCF3-201ENST00000262965 NCAM2O15394 837 aa13.81□□□□□ -0.2
TCF3-201ENST00000262965 CCNT2O60583 730 aaKnown RBP13.81□□□□□ -0.2
TCF3-201ENST00000262965 HNRNPLP14866 589 aaKnown RBP eCLIP13.81□□□□□ -0.27e-8■■■■□ 21.9
TCF3-201ENST00000262965 CDK7P50613 346 aa13.81□□□□□ -0.2
TCF3-201ENST00000262965 C21orf59P57076 290 aa13.81□□□□□ -0.2
TCF3-201ENST00000262965 AARS2Q5JTZ9 985 aaKnown RBP13.81□□□□□ -0.2
TCF3-201ENST00000262965 LRRC38Q5VT99 294 aa13.81□□□□□ -0.2
TCF3-201ENST00000262965 NECAB2Q7Z6G3 386 aa13.81□□□□□ -0.2
TCF3-201ENST00000262965 KIAA0319LQ8IZA0 1049 aa13.81□□□□□ -0.2
TCF3-201ENST00000262965 SPATA13Q96N96 652 aa13.81□□□□□ -0.2
TCF3-201ENST00000262965 SLC25A23Q9BV35 468 aa13.81□□□□□ -0.2
TCF3-201ENST00000262965 ACE2Q9BYF1 805 aaPredicted RBP13.81□□□□□ -0.2
TCF3-201ENST00000262965 CORO1CQ9ULV4 474 aaPredicted RBP13.81□□□□□ -0.2
TCF3-201ENST00000262965 MAGEB16A2A368 324 aa13.8□□□□□ -0.2
TCF3-201ENST00000262965 SLC2A3P11169 496 aa13.8□□□□□ -0.2
TCF3-201ENST00000262965 DSG3P32926 999 aa13.8□□□□□ -0.2
TCF3-201ENST00000262965 NR2C2P49116 596 aa13.8□□□□□ -0.2
TCF3-201ENST00000262965 FAM98BQ52LJ0 330 aaKnown RBP13.8□□□□□ -0.2
TCF3-201ENST00000262965 NET1Q7Z628 596 aaPredicted RBP13.8□□□□□ -0.2
TCF3-201ENST00000262965 BBS7Q8IWZ6 715 aa13.8□□□□□ -0.2
TCF3-201ENST00000262965 RBM15BQ8NDT2 890 aaKnown RBP13.8□□□□□ -0.2
TCF3-201ENST00000262965 TNIP2Q8NFZ5 429 aa13.8□□□□□ -0.2
TCF3-201ENST00000262965 DNAJB14Q8TBM8 379 aa13.8□□□□□ -0.2
TCF3-201ENST00000262965 KCTD4Q8WVF5 259 aa13.8□□□□□ -0.2
TCF3-201ENST00000262965 MKL1Q969V6 931 aa13.8□□□□□ -0.2
TCF3-201ENST00000262965 NDNQ99608 321 aa13.8□□□□□ -0.2
TCF3-201ENST00000262965 TKTL2Q9H0I9 626 aa13.8□□□□□ -0.2
TCF3-201ENST00000262965 ELOVL6Q9H5J4 265 aa13.8□□□□□ -0.2
TCF3-201ENST00000262965 VTI1BQ9UEU0 232 aa13.8□□□□□ -0.2
TCF3-201ENST00000262965 VPS9D1Q9Y2B5 631 aa13.8□□□□□ -0.2
TCF3-201ENST00000262965 AK5Q9Y6K8 562 aa13.8□□□□□ -0.2
TCF3-201ENST00000262965 PEX11AO75192 247 aa13.8□□□□□ -0.2
TCF3-201ENST00000262965 ARIH2O95376 493 aa13.8□□□□□ -0.2
TCF3-201ENST00000262965 MARSP56192 900 aaKnown RBP13.8□□□□□ -0.2
TCF3-201ENST00000262965 LSM3P62310 102 aaKnown RBP13.8□□□□□ -0.2
TCF3-201ENST00000262965 PFKFB4Q16877 469 aa13.8□□□□□ -0.2
TCF3-201ENST00000262965 BMT2Q1RMZ1 405 aa13.8□□□□□ -0.2
TCF3-201ENST00000262965 B3GNT6Q6ZMB0 384 aa13.8□□□□□ -0.2
TCF3-201ENST00000262965 SLC41A1Q8IVJ1 513 aa13.8□□□□□ -0.2
TCF3-201ENST00000262965 SLC22A9Q8IVM8 553 aa13.8□□□□□ -0.2
TCF3-201ENST00000262965 DPY30Q9C005 99 aa13.8□□□□□ -0.2
TCF3-201ENST00000262965 C6orf62Q9GZU0 229 aaPredicted RBP13.8□□□□□ -0.2
TCF3-201ENST00000262965 SEMA4BQ9NPR2 832 aaPredicted RBP13.8□□□□□ -0.2
TCF3-201ENST00000262965 ZMYM5Q9UJ78 669 aa13.8□□□□□ -0.2
TCF3-201ENST00000262965 MRC1P22897 1456 aa13.8□□□□□ -0.2
TCF3-201ENST00000262965 A0A087WXM4 84 aa13.8□□□□□ -0.2
TCF3-201ENST00000262965 AGRPO00253 132 aa13.8□□□□□ -0.2
TCF3-201ENST00000262965 ITGA2BP08514 1039 aa13.8□□□□□ -0.2
TCF3-201ENST00000262965 GOT1P17174 413 aa13.8□□□□□ -0.2
TCF3-201ENST00000262965 GRIA4P48058 902 aa13.8□□□□□ -0.2
TCF3-201ENST00000262965 EEF1DP3Q658K8 133 aa13.8□□□□□ -0.2
TCF3-201ENST00000262965 RBM44Q6ZP01 1051 aaKnown RBP13.8□□□□□ -0.2
TCF3-201ENST00000262965 NIPA1Q7RTP0 329 aa13.8□□□□□ -0.2
TCF3-201ENST00000262965 C10orf107Q8IVU9 208 aa13.8□□□□□ -0.2
TCF3-201ENST00000262965 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.8□□□□□ -0.28e-6■■■■□ 25.6
TCF3-201ENST00000262965 LPCAT1Q8NF37 534 aa13.8□□□□□ -0.2
TCF3-201ENST00000262965 EBNA1BP2Q99848 306 aaKnown RBP13.8□□□□□ -0.2
TCF3-201ENST00000262965 NOL6Q9H6R4 1146 aaKnown RBP13.8□□□□□ -0.2
TCF3-201ENST00000262965 CAB39LQ9H9S4 337 aa13.8□□□□□ -0.2
TCF3-201ENST00000262965 PDGFCQ9NRA1 345 aa13.8□□□□□ -0.2
TCF3-201ENST00000262965 GNG14A0A1W2PPG7 69 aa13.8□□□□□ -0.2
TCF3-201ENST00000262965 CAPN8A6NHC0 703 aa13.8□□□□□ -0.2
TCF3-201ENST00000262965 OCM2P0CE71 109 aa13.8□□□□□ -0.2
TCF3-201ENST00000262965 OCMP0CE72 109 aaPredicted RBP13.8□□□□□ -0.2
TCF3-201ENST00000262965 CCDC166P0CW27 439 aa13.8□□□□□ -0.2
TCF3-201ENST00000262965 FCGR1AP12314 374 aa13.8□□□□□ -0.2
TCF3-201ENST00000262965 HALP42357 657 aa13.8□□□□□ -0.2
TCF3-201ENST00000262965 ZNF143P52747 638 aaPredicted RBP13.8□□□□□ -0.2
TCF3-201ENST00000262965 CTBP1Q13363 440 aa13.8□□□□□ -0.2
TCF3-201ENST00000262965 PLEKHM3Q6ZWE6 761 aa13.8□□□□□ -0.2
TCF3-201ENST00000262965 MYO1HQ8N1T3 1032 aa13.8□□□□□ -0.2
TCF3-201ENST00000262965 TSPAN14Q8NG11 270 aa13.8□□□□□ -0.2
TCF3-201ENST00000262965 FBXO30Q8TB52 745 aa13.8□□□□□ -0.2
TCF3-201ENST00000262965 SPPL2AQ8TCT8 520 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms