RNA–Protein interactions for RNA: ENST00000254231.4

LIN28A-201, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 3,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-201ENST00000254231 PAPOLAP51003 745 aaKnown RBP11.94□□□□□ -0.5
LIN28A-201ENST00000254231 PDK2Q15119 407 aa11.94□□□□□ -0.5
LIN28A-201ENST00000254231 GPR158Q5T848 1215 aa11.94□□□□□ -0.5
LIN28A-201ENST00000254231 IGDCC3Q8IVU1 814 aa11.94□□□□□ -0.5
LIN28A-201ENST00000254231 WDR6Q9NNW5 1121 aaKnown RBP11.94□□□□□ -0.5
LIN28A-201ENST00000254231 CCL26Q9Y258 94 aa11.94□□□□□ -0.5
LIN28A-201ENST00000254231 COMMD10Q9Y6G5 202 aa11.94□□□□□ -0.5
LIN28A-201ENST00000254231 CCDC195A0A1B0GUA6 201 aa11.94□□□□□ -0.5
LIN28A-201ENST00000254231 IRAK2O43187 625 aa11.94□□□□□ -0.5
LIN28A-201ENST00000254231 DNAJC6O75061 913 aa11.94□□□□□ -0.5
LIN28A-201ENST00000254231 STAU1O95793 577 aaKnown RBP11.94□□□□□ -0.5
LIN28A-201ENST00000254231 SOD2P04179 222 aa11.94□□□□□ -0.5
LIN28A-201ENST00000254231 TYMPP19971 482 aa11.94□□□□□ -0.5
LIN28A-201ENST00000254231 DNAJB1P25685 340 aa11.94□□□□□ -0.5
LIN28A-201ENST00000254231 GBP2P32456 591 aaPredicted RBP11.94□□□□□ -0.5
LIN28A-201ENST00000254231 LMNB2Q03252 620 aa11.94□□□□□ -0.5
LIN28A-201ENST00000254231 PPIGQ13427 754 aaKnown RBP eCLIP11.94□□□□□ -0.5
LIN28A-201ENST00000254231 CYP4V2Q6ZWL3 525 aaPredicted RBP11.94□□□□□ -0.5
LIN28A-201ENST00000254231 FBF1Q8TES7 1133 aa11.94□□□□□ -0.5
LIN28A-201ENST00000254231 NSMCE1Q8WV22 266 aa11.94□□□□□ -0.5
LIN28A-201ENST00000254231 HMCESQ96FZ2 354 aa11.94□□□□□ -0.5
LIN28A-201ENST00000254231 TOX2Q96NM4 488 aa11.94□□□□□ -0.5
LIN28A-201ENST00000254231 SHCBP1LQ9BZQ2 653 aa11.94□□□□□ -0.5
LIN28A-201ENST00000254231 ZNF334Q9HCZ1 680 aaPredicted RBP11.94□□□□□ -0.5
LIN28A-201ENST00000254231 BPIFA1Q9NP55 256 aa11.94□□□□□ -0.5
LIN28A-201ENST00000254231 CACNA1HO95180 2353 aa11.93□□□□□ -0.5
LIN28A-201ENST00000254231 OR6C75A6NL08 312 aa11.93□□□□□ -0.5
LIN28A-201ENST00000254231 C3orf70A6NLC5 250 aaPredicted RBP11.93□□□□□ -0.5
LIN28A-201ENST00000254231 KCNU1A8MYU2 1149 aa11.93□□□□□ -0.5
LIN28A-201ENST00000254231 RASA4BC9J798 803 aa11.93□□□□□ -0.5
LIN28A-201ENST00000254231 RASA4O43374 803 aa11.93□□□□□ -0.5
LIN28A-201ENST00000254231 TBL1XO60907 577 aa11.93□□□□□ -0.5
LIN28A-201ENST00000254231 TOP3BO95985 862 aaKnown RBP11.93□□□□□ -0.5
LIN28A-201ENST00000254231 ERVK-10P10266 1014 aa11.93□□□□□ -0.5
LIN28A-201ENST00000254231 MAGEA10P43363 369 aaPredicted RBP11.93□□□□□ -0.5
LIN28A-201ENST00000254231 ARL4CP56559 192 aa11.93□□□□□ -0.5
LIN28A-201ENST00000254231 SLC10A7Q0GE19 358 aa11.93□□□□□ -0.5
LIN28A-201ENST00000254231 ZNF235Q14590 738 aa11.93□□□□□ -0.5
LIN28A-201ENST00000254231 POLD3Q15054 466 aaPredicted RBP11.93□□□□□ -0.5
LIN28A-201ENST00000254231 FBXO48Q5FWF7 155 aa11.93□□□□□ -0.5
LIN28A-201ENST00000254231 PIK3R6Q5UE93 754 aa11.93□□□□□ -0.5
LIN28A-201ENST00000254231 OTUD1Q5VV17 481 aaPredicted RBP11.93□□□□□ -0.5
LIN28A-201ENST00000254231 ZDHHC17Q8IUH5 632 aa11.93□□□□□ -0.5
LIN28A-201ENST00000254231 CCDC117Q8IWD4 279 aaPredicted RBP11.93□□□□□ -0.5
LIN28A-201ENST00000254231 CMTM8Q8IZV2 173 aa11.93□□□□□ -0.5
LIN28A-201ENST00000254231 GCNAQ96QF7 691 aa11.93□□□□□ -0.5
LIN28A-201ENST00000254231 MYOCQ99972 504 aa11.93□□□□□ -0.5
LIN28A-201ENST00000254231 TNKS2Q9H2K2 1166 aa11.93□□□□□ -0.5
LIN28A-201ENST00000254231 LINC00597Q9H2U6 94 aa11.93□□□□□ -0.5
LIN28A-201ENST00000254231 DOCK8Q8NF50 2099 aa11.93□□□□□ -0.5
LIN28A-201ENST00000254231 AGPSO00116 658 aa11.93□□□□□ -0.5
LIN28A-201ENST00000254231 LAG3P18627 525 aa11.93□□□□□ -0.5
LIN28A-201ENST00000254231 ITIH2P19823 946 aa11.93□□□□□ -0.5
LIN28A-201ENST00000254231 CD72P21854 359 aa11.93□□□□□ -0.5
LIN28A-201ENST00000254231 SGSHP51688 502 aa11.93□□□□□ -0.5
LIN28A-201ENST00000254231 HADHBP55084 474 aaKnown RBP11.93□□□□□ -0.5
LIN28A-201ENST00000254231 GALNT3Q14435 633 aa11.93□□□□□ -0.5
LIN28A-201ENST00000254231 TTMPQ5BVD1 217 aa11.93□□□□□ -0.5
LIN28A-201ENST00000254231 RARS2Q5T160 578 aaKnown RBP11.93□□□□□ -0.5
LIN28A-201ENST00000254231 VSTM1Q6UX27 236 aa11.93□□□□□ -0.5
LIN28A-201ENST00000254231 ZNF567Q8N184 647 aa11.93□□□□□ -0.5
LIN28A-201ENST00000254231 GRIN3AQ8TCU5 1115 aa11.93□□□□□ -0.5
LIN28A-201ENST00000254231 STK32AQ8WU08 396 aa11.93□□□□□ -0.5
LIN28A-201ENST00000254231 ZNF669Q96BR6 464 aaPredicted RBP11.93□□□□□ -0.5
LIN28A-201ENST00000254231 SERPINB11Q96P15 392 aa11.93□□□□□ -0.5
LIN28A-201ENST00000254231 CCDC77Q9BR77 488 aa11.93□□□□□ -0.5
LIN28A-201ENST00000254231 NKX2-4Q9H2Z4 354 aa11.93□□□□□ -0.5
LIN28A-201ENST00000254231 MAN1C1Q9NR34 630 aa11.93□□□□□ -0.5
LIN28A-201ENST00000254231 NINJ2Q9NZG7 142 aa11.93□□□□□ -0.5
LIN28A-201ENST00000254231 PCYOX1Q9UHG3 505 aa11.93□□□□□ -0.5
LIN28A-201ENST00000254231 G3BP2Q9UN86 482 aaKnown RBP11.93□□□□□ -0.5
LIN28A-201ENST00000254231 PCDHGC4Q9Y5F7 938 aa11.93□□□□□ -0.5
LIN28A-201ENST00000254231 K7ERQ8 282 aa11.92□□□□□ -0.5
LIN28A-201ENST00000254231 DPYSL4O14531 572 aa11.92□□□□□ -0.5
LIN28A-201ENST00000254231 F9P00740 461 aa11.92□□□□□ -0.5
LIN28A-201ENST00000254231 FGFR3P22607 806 aa11.92□□□□□ -0.5
LIN28A-201ENST00000254231 CD86P42081 329 aa11.92□□□□□ -0.5
LIN28A-201ENST00000254231 EPHB1P54762 984 aa11.92□□□□□ -0.5
LIN28A-201ENST00000254231 ZBTB17Q13105 803 aa11.92□□□□□ -0.5
LIN28A-201ENST00000254231 TSTA3Q13630 321 aaPredicted RBP11.92□□□□□ -0.5
LIN28A-201ENST00000254231 TRMT10BQ6PF06 316 aaKnown RBP11.92□□□□□ -0.5
LIN28A-201ENST00000254231 PDZD4Q76G19 769 aaPredicted RBP11.92□□□□□ -0.5
LIN28A-201ENST00000254231 STRADAQ7RTN6 431 aa11.92□□□□□ -0.5
LIN28A-201ENST00000254231 SLC39A11Q8N1S5 342 aa11.92□□□□□ -0.5
LIN28A-201ENST00000254231 FNIP1Q8TF40 1166 aa11.92□□□□□ -0.5
LIN28A-201ENST00000254231 ARHGEF2Q92974 986 aaKnown RBP11.92□□□□□ -0.5
LIN28A-201ENST00000254231 TMA16Q96EY4 203 aaKnown RBP11.92□□□□□ -0.5
LIN28A-201ENST00000254231 ZNF778Q96MU6 729 aa11.92□□□□□ -0.5
LIN28A-201ENST00000254231 FICDQ9BVA6 458 aa11.92□□□□□ -0.5
LIN28A-201ENST00000254231 CFHR5Q9BXR6 569 aa11.92□□□□□ -0.5
LIN28A-201ENST00000254231 ATP13A1Q9HD20 1204 aa11.92□□□□□ -0.5
LIN28A-201ENST00000254231 HOMER3Q9NSC5 361 aa11.92□□□□□ -0.5
LIN28A-201ENST00000254231 MRPS23Q9Y3D9 190 aaKnown RBP11.92□□□□□ -0.5
LIN28A-201ENST00000254231 WNT6Q9Y6F9 365 aa11.92□□□□□ -0.5
LIN28A-201ENST00000254231 RPS6KL1Q9Y6S9 549 aa11.92□□□□□ -0.5
LIN28A-201ENST00000254231 NEDD8-MDP1E9PL57 170 aa11.92□□□□□ -0.5
LIN28A-201ENST00000254231 NRG2O14511 850 aaPredicted RBP11.92□□□□□ -0.5
LIN28A-201ENST00000254231 PPP1R12AO14974 1030 aaPredicted RBP11.92□□□□□ -0.5
LIN28A-201ENST00000254231 RAMP2O60895 175 aa11.92□□□□□ -0.5
LIN28A-201ENST00000254231 SYF2O95926 243 aaKnown RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 170.1 ms