RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 ASB3Q9Y575 518 aa17.44■□□□□ 0.38
CDKN1A-201ENST00000244741 SPAG7O75391 227 aa17.43■□□□□ 0.38
CDKN1A-201ENST00000244741 DNAJC8O75937 253 aaPredicted RBP17.43■□□□□ 0.38
CDKN1A-201ENST00000244741 RHOP08100 348 aa17.43■□□□□ 0.38
CDKN1A-201ENST00000244741 FOXN2P32314 431 aa17.43■□□□□ 0.38
CDKN1A-201ENST00000244741 RPL22P35268 128 aaKnown RBP17.43■□□□□ 0.38
CDKN1A-201ENST00000244741 WDR4P57081 412 aaKnown RBP17.43■□□□□ 0.38
CDKN1A-201ENST00000244741 DLX2Q07687 328 aaPredicted RBP17.43■□□□□ 0.38
CDKN1A-201ENST00000244741 ZKSCAN8Q15776 578 aaPredicted RBP17.43■□□□□ 0.38
CDKN1A-201ENST00000244741 ARHGAP18Q8N392 663 aa17.43■□□□□ 0.38
CDKN1A-201ENST00000244741 TAB3Q8N5C8 712 aaPredicted RBP17.43■□□□□ 0.38
CDKN1A-201ENST00000244741 CCDC185Q8N715 623 aa17.43■□□□□ 0.38
CDKN1A-201ENST00000244741 TTC13Q8NBP0 860 aa17.43■□□□□ 0.38
CDKN1A-201ENST00000244741 CMASQ8NFW8 434 aaPredicted RBP17.43■□□□□ 0.38
CDKN1A-201ENST00000244741 CPT1BQ92523 772 aa17.43■□□□□ 0.38
CDKN1A-201ENST00000244741 HSPH1Q92598 858 aa17.43■□□□□ 0.38
CDKN1A-201ENST00000244741 RNF34Q969K3 372 aa17.43■□□□□ 0.38
CDKN1A-201ENST00000244741 MAGEB18Q96M61 343 aa17.43■□□□□ 0.38
CDKN1A-201ENST00000244741 CEP295NLQ96MC4 621 aa17.43■□□□□ 0.38
CDKN1A-201ENST00000244741 PRKD2Q9BZL6 878 aa17.43■□□□□ 0.38
CDKN1A-201ENST00000244741 ANLNQ9NQW6 1124 aa17.43■□□□□ 0.38
CDKN1A-201ENST00000244741 GGT7Q9UJ14 662 aa17.43■□□□□ 0.38
CDKN1A-201ENST00000244741 SLC12A4Q9UP95 1085 aa17.43■□□□□ 0.38
CDKN1A-201ENST00000244741 SCAMP3O14828 347 aaKnown RBP17.43■□□□□ 0.38
CDKN1A-201ENST00000244741 COCHO43405 550 aa17.43■□□□□ 0.38
CDKN1A-201ENST00000244741 GPX6P59796 221 aa17.43■□□□□ 0.38
CDKN1A-201ENST00000244741 XRCC4Q13426 336 aa17.43■□□□□ 0.38
CDKN1A-201ENST00000244741 MSS51Q4VC12 460 aa17.43■□□□□ 0.38
CDKN1A-201ENST00000244741 FAM133BQ5BKY9 247 aaKnown RBP17.43■□□□□ 0.38
CDKN1A-201ENST00000244741 ICE2Q659A1 982 aa17.43■□□□□ 0.38
CDKN1A-201ENST00000244741 PPP1R21Q6ZMI0 780 aa17.43■□□□□ 0.38
CDKN1A-201ENST00000244741 RFX6Q8HWS3 928 aa17.43■□□□□ 0.38
CDKN1A-201ENST00000244741 UNC45BQ8IWX7 931 aa17.43■□□□□ 0.38
CDKN1A-201ENST00000244741 MAB21L3Q8N8X9 362 aa17.43■□□□□ 0.38
CDKN1A-201ENST00000244741 ING5Q8WYH8 240 aa17.43■□□□□ 0.38
CDKN1A-201ENST00000244741 SMG7Q92540 1137 aaKnown RBP17.43■□□□□ 0.38
CDKN1A-201ENST00000244741 CENPIQ92674 756 aaPredicted RBP17.43■□□□□ 0.38
CDKN1A-201ENST00000244741 MRRFQ96E11 262 aaKnown RBP17.43■□□□□ 0.38
CDKN1A-201ENST00000244741 FRMD8P1Q9BZ68 369 aaPredicted RBP17.43■□□□□ 0.38
CDKN1A-201ENST00000244741 KIF9Q9HAQ2 790 aa17.43■□□□□ 0.38
CDKN1A-201ENST00000244741 SMPD4Q9NXE4 827 aa17.43■□□□□ 0.38
CDKN1A-201ENST00000244741 UXTQ9UBK9 157 aaPredicted RBP17.43■□□□□ 0.38
CDKN1A-201ENST00000244741 FAM47DPA6NHR8 397 aa17.42■□□□□ 0.38
CDKN1A-201ENST00000244741 XYLBO75191 536 aa17.42■□□□□ 0.38
CDKN1A-201ENST00000244741 PTPN2P17706 415 aa17.42■□□□□ 0.38
CDKN1A-201ENST00000244741 TAC1P20366 129 aa17.42■□□□□ 0.38
CDKN1A-201ENST00000244741 CCDC85BQ15834 202 aaPredicted RBP17.42■□□□□ 0.38
CDKN1A-201ENST00000244741 HIF1AQ16665 826 aa17.42■□□□□ 0.38
CDKN1A-201ENST00000244741 ZC3H12AQ5D1E8 599 aaKnown RBP17.42■□□□□ 0.38
CDKN1A-201ENST00000244741 FNBP1LQ5T0N5 605 aa17.42■□□□□ 0.38
CDKN1A-201ENST00000244741 HECTD3Q5T447 861 aa17.42■□□□□ 0.38
CDKN1A-201ENST00000244741 CGB2Q6NT52 195 aa17.42■□□□□ 0.38
CDKN1A-201ENST00000244741 PDZD4Q76G19 769 aaPredicted RBP17.42■□□□□ 0.38
CDKN1A-201ENST00000244741 PPIL6Q8IXY8 311 aa17.42■□□□□ 0.38
CDKN1A-201ENST00000244741 NAT8LQ8N9F0 302 aa17.42■□□□□ 0.38
CDKN1A-201ENST00000244741 SMG9Q9H0W8 520 aaKnown RBP17.42■□□□□ 0.38
CDKN1A-201ENST00000244741 CLIC5Q9NZA1 410 aa17.42■□□□□ 0.38
CDKN1A-201ENST00000244741 MARCH2Q9P0N8 246 aa17.42■□□□□ 0.38
CDKN1A-201ENST00000244741 TCRBV7S3A2A0A539 114 aa17.42■□□□□ 0.38
CDKN1A-201ENST00000244741 NDC80O14777 642 aa17.42■□□□□ 0.38
CDKN1A-201ENST00000244741 PRPSAP2O60256 369 aa17.42■□□□□ 0.38
CDKN1A-201ENST00000244741 GSTA1P08263 222 aa17.42■□□□□ 0.38
CDKN1A-201ENST00000244741 RDXP35241 583 aaKnown RBP17.42■□□□□ 0.38
CDKN1A-201ENST00000244741 PSEN1P49768 467 aa17.42■□□□□ 0.38
CDKN1A-201ENST00000244741 NR1H3Q13133 447 aa17.42■□□□□ 0.38
CDKN1A-201ENST00000244741 PABPC1LQ4VXU2 614 aaKnown RBP17.42■□□□□ 0.38
CDKN1A-201ENST00000244741 CYP4V2Q6ZWL3 525 aaPredicted RBP17.42■□□□□ 0.38
CDKN1A-201ENST00000244741 SPATA21Q7Z572 469 aa17.42■□□□□ 0.38
CDKN1A-201ENST00000244741 PCGF5Q86SE9 256 aa17.42■□□□□ 0.38
CDKN1A-201ENST00000244741 ARL14EPQ8N8R7 260 aaPredicted RBP17.42■□□□□ 0.38
CDKN1A-201ENST00000244741 PDZD8Q8NEN9 1154 aa17.42■□□□□ 0.38
CDKN1A-201ENST00000244741 ST13P5Q8NFI4 369 aaPredicted RBP17.42■□□□□ 0.38
CDKN1A-201ENST00000244741 RSAD2Q8WXG1 361 aa17.42■□□□□ 0.38
CDKN1A-201ENST00000244741 CDCA3Q99618 268 aaPredicted RBP17.42■□□□□ 0.38
CDKN1A-201ENST00000244741 TRABDQ9H4I3 376 aa17.42■□□□□ 0.38
CDKN1A-201ENST00000244741 WDR6Q9NNW5 1121 aaKnown RBP17.42■□□□□ 0.38
CDKN1A-201ENST00000244741 GKN1Q9NS71 199 aa17.42■□□□□ 0.38
CDKN1A-201ENST00000244741 ZDHHC7Q9NXF8 308 aa17.42■□□□□ 0.38
CDKN1A-201ENST00000244741 CLDND1Q9NY35 253 aa17.42■□□□□ 0.38
CDKN1A-201ENST00000244741 DPP7Q9UHL4 492 aa17.42■□□□□ 0.38
CDKN1A-201ENST00000244741 NOTCH4Q99466 2003 aa17.41■□□□□ 0.38
CDKN1A-201ENST00000244741 ANAPC1Q9H1A4 1944 aa17.41■□□□□ 0.38
CDKN1A-201ENST00000244741 CLUHO75153 1309 aa17.41■□□□□ 0.38
CDKN1A-201ENST00000244741 SLC12A8A0AV02 714 aa17.41■□□□□ 0.38
CDKN1A-201ENST00000244741 VGLL3A8MV65 326 aa17.41■□□□□ 0.38
CDKN1A-201ENST00000244741 I6L893 689 aaPredicted RBP17.41■□□□□ 0.38
CDKN1A-201ENST00000244741 SUN1O94901 812 aa17.41■□□□□ 0.38
CDKN1A-201ENST00000244741 MOCS2O96007 188 aaPredicted RBP17.41■□□□□ 0.38
CDKN1A-201ENST00000244741 HNRNPA1P09651 372 aaKnown RBP eCLIP17.41■□□□□ 0.38
CDKN1A-201ENST00000244741 CBX2Q14781 532 aaPredicted RBP17.41■□□□□ 0.38
CDKN1A-201ENST00000244741 TEAD2Q15562 447 aa17.41■□□□□ 0.38
CDKN1A-201ENST00000244741 CA9Q16790 459 aa17.41■□□□□ 0.38
CDKN1A-201ENST00000244741 CYB5D1Q6P9G0 228 aa17.41■□□□□ 0.38
CDKN1A-201ENST00000244741 PYROXD2Q8N2H3 581 aa17.41■□□□□ 0.38
CDKN1A-201ENST00000244741 EFHBQ8N7U6 833 aa17.41■□□□□ 0.38
CDKN1A-201ENST00000244741 FAM71DQ8N9W8 422 aa17.41■□□□□ 0.38
CDKN1A-201ENST00000244741 SHKBP1Q8TBC3 707 aa17.41■□□□□ 0.38
CDKN1A-201ENST00000244741 DENND1AQ8TEH3 1009 aa17.41■□□□□ 0.38
CDKN1A-201ENST00000244741 PAIP2Q9BPZ3 127 aaKnown RBP17.41■□□□□ 0.38
CDKN1A-201ENST00000244741 CALN1Q9BXU9 219 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms