RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 SLC35F5Q8WV83 523 aa15.86■□□□□ 0.13
DDX55-201ENST00000238146 RCN3Q96D15 328 aa15.86■□□□□ 0.13
DDX55-201ENST00000238146 C12orf42Q96LP6 360 aa15.86■□□□□ 0.13
DDX55-201ENST00000238146 RBBP8Q99708 897 aa15.86■□□□□ 0.13
DDX55-201ENST00000238146 C11orf84Q9BUA3 381 aaPredicted RBP15.86■□□□□ 0.13
DDX55-201ENST00000238146 AS3MTQ9HBK9 375 aa15.86■□□□□ 0.13
DDX55-201ENST00000238146 SPDYE16A6NNV3 312 aaPredicted RBP15.85■□□□□ 0.13
DDX55-201ENST00000238146 MATN2O00339 956 aa15.85■□□□□ 0.13
DDX55-201ENST00000238146 CFLARO15519 480 aa15.85■□□□□ 0.13
DDX55-201ENST00000238146 CAPNS1P04632 268 aa15.85■□□□□ 0.13
DDX55-201ENST00000238146 MPSTP25325 297 aa15.85■□□□□ 0.13
DDX55-201ENST00000238146 PSMB4P28070 264 aa15.85■□□□□ 0.13
DDX55-201ENST00000238146 EPHA3P29320 983 aa15.85■□□□□ 0.13
DDX55-201ENST00000238146 PTPN9P43378 593 aa15.85■□□□□ 0.13
DDX55-201ENST00000238146 SERPINB8P50452 374 aa15.85■□□□□ 0.13
DDX55-201ENST00000238146 GTF2A2P52657 109 aa15.85■□□□□ 0.13
DDX55-201ENST00000238146 CREB5Q02930 508 aa15.85■□□□□ 0.13
DDX55-201ENST00000238146 LY6KQ17RY6 165 aa15.85■□□□□ 0.13
DDX55-201ENST00000238146 SLC10A6Q3KNW5 377 aa15.85■□□□□ 0.13
DDX55-201ENST00000238146 METTL7BQ6UX53 244 aa15.85■□□□□ 0.13
DDX55-201ENST00000238146 PYROXD2Q8N2H3 581 aa15.85■□□□□ 0.13
DDX55-201ENST00000238146 USP13Q92995 863 aaPredicted RBP15.85■□□□□ 0.13
DDX55-201ENST00000238146 ILKAPQ9H0C8 392 aaPredicted RBP15.85■□□□□ 0.13
DDX55-201ENST00000238146 ACSS2Q9NR19 701 aa15.85■□□□□ 0.13
DDX55-201ENST00000238146 FAM49BQ9NUQ9 324 aa15.85■□□□□ 0.13
DDX55-201ENST00000238146 USP3Q9Y6I4 520 aa15.85■□□□□ 0.13
DDX55-201ENST00000238146 A0A096LPK6 155 aa15.85■□□□□ 0.13
DDX55-201ENST00000238146 PRSS51A0A1B0GVH4 220 aa15.85■□□□□ 0.13
DDX55-201ENST00000238146 HACD1B0YJ81 288 aa15.85■□□□□ 0.13
DDX55-201ENST00000238146 RNF103O00237 685 aa15.85■□□□□ 0.13
DDX55-201ENST00000238146 SLC5A2P31639 672 aa15.85■□□□□ 0.13
DDX55-201ENST00000238146 DPP6P42658 865 aa15.85■□□□□ 0.13
DDX55-201ENST00000238146 LIMK2P53671 638 aa15.85■□□□□ 0.13
DDX55-201ENST00000238146 CYLC2Q14093 348 aaPredicted RBP15.85■□□□□ 0.13
DDX55-201ENST00000238146 KLC3Q6P597 504 aa15.85■□□□□ 0.13
DDX55-201ENST00000238146 EEPD1Q7L9B9 569 aa15.85■□□□□ 0.13
DDX55-201ENST00000238146 STRA8Q7Z7C7 330 aa15.85■□□□□ 0.13
DDX55-201ENST00000238146 CLEC14AQ86T13 490 aa15.85■□□□□ 0.13
DDX55-201ENST00000238146 NIM1KQ8IY84 436 aa15.85■□□□□ 0.13
DDX55-201ENST00000238146 ADAM32Q8TC27 787 aa15.85■□□□□ 0.13
DDX55-201ENST00000238146 CLEC4CQ8WTT0 213 aa15.85■□□□□ 0.13
DDX55-201ENST00000238146 CENPIQ92674 756 aaPredicted RBP15.85■□□□□ 0.13
DDX55-201ENST00000238146 P2RY11Q96G91 374 aa15.85■□□□□ 0.13
DDX55-201ENST00000238146 MRPL1Q9BYD6 325 aaKnown RBP15.85■□□□□ 0.13
DDX55-201ENST00000238146 CAB39LQ9H9S4 337 aa15.85■□□□□ 0.13
DDX55-201ENST00000238146 DNAAF2Q9NVR5 837 aaKnown RBP15.85■□□□□ 0.13
DDX55-201ENST00000238146 ADAM28Q9UKQ2 775 aa15.85■□□□□ 0.13
DDX55-201ENST00000238146 FZD1Q9UP38 647 aa15.85■□□□□ 0.13
DDX55-201ENST00000238146 TRIP11Q15643 1979 aa15.85■□□□□ 0.13
DDX55-201ENST00000238146 KPNA7A9QM74 516 aa15.84■□□□□ 0.13
DDX55-201ENST00000238146 PEX10O60683 326 aa15.84■□□□□ 0.13
DDX55-201ENST00000238146 SPRP35270 261 aaPredicted RBP15.84■□□□□ 0.13
DDX55-201ENST00000238146 ABCG1P45844 678 aa15.84■□□□□ 0.13
DDX55-201ENST00000238146 CLCN3P51790 818 aa15.84■□□□□ 0.13
DDX55-201ENST00000238146 ATXN3P54252 364 aaPredicted RBP15.84■□□□□ 0.13
DDX55-201ENST00000238146 OLIG2Q13516 323 aa15.84■□□□□ 0.13
DDX55-201ENST00000238146 BORAQ6PGQ7 559 aa15.84■□□□□ 0.13
DDX55-201ENST00000238146 ACOT1Q86TX2 421 aa15.84■□□□□ 0.13
DDX55-201ENST00000238146 ZNF410Q86VK4 478 aa15.84■□□□□ 0.13
DDX55-201ENST00000238146 ALDH16A1Q8IZ83 802 aa15.84■□□□□ 0.13
DDX55-201ENST00000238146 DDI1Q8WTU0 396 aa15.84■□□□□ 0.13
DDX55-201ENST00000238146 PDZD7Q9H5P4 517 aa15.84■□□□□ 0.13
DDX55-201ENST00000238146 ASB7Q9H672 318 aa15.84■□□□□ 0.13
DDX55-201ENST00000238146 CIDEBQ9UHD4 219 aa15.84■□□□□ 0.13
DDX55-201ENST00000238146 hCG_2014768A0A024R1R8 64 aa15.84■□□□□ 0.13
DDX55-201ENST00000238146 ARHGAP10A1A4S6 786 aa15.84■□□□□ 0.13
DDX55-201ENST00000238146 H3BSA7 217 aa15.84■□□□□ 0.13
DDX55-201ENST00000238146 STX16-NPEPL1H3BU86 382 aa15.84■□□□□ 0.13
DDX55-201ENST00000238146 HDAC3O15379 428 aa15.84■□□□□ 0.13
DDX55-201ENST00000238146 MFSD11O43934 449 aa15.84■□□□□ 0.13
DDX55-201ENST00000238146 ENO3P13929 434 aaPredicted RBP15.84■□□□□ 0.13
DDX55-201ENST00000238146 NR1H2P55055 460 aa15.84■□□□□ 0.13
DDX55-201ENST00000238146 HSDL1Q3SXM5 330 aa15.84■□□□□ 0.13
DDX55-201ENST00000238146 SPANXN3Q5MJ09 141 aa15.84■□□□□ 0.13
DDX55-201ENST00000238146 PGAM4Q8N0Y7 254 aa15.84■□□□□ 0.13
DDX55-201ENST00000238146 AFG1LQ8WV93 481 aa15.84■□□□□ 0.13
DDX55-201ENST00000238146 CNKSR2Q8WXI2 1034 aa15.84■□□□□ 0.13
DDX55-201ENST00000238146 KLHL32Q96NJ5 620 aa15.84■□□□□ 0.13
DDX55-201ENST00000238146 AGAP2Q99490 1192 aa15.84■□□□□ 0.13
DDX55-201ENST00000238146 SLC2A11Q9BYW1 496 aa15.84■□□□□ 0.13
DDX55-201ENST00000238146 QTRT2Q9H974 415 aaKnown RBP15.84■□□□□ 0.13
DDX55-201ENST00000238146 NMRAL1Q9HBL8 299 aa15.84■□□□□ 0.13
DDX55-201ENST00000238146 BCAP29Q9UHQ4 241 aa15.84■□□□□ 0.13
DDX55-201ENST00000238146 GMEB1Q9Y692 573 aa15.84■□□□□ 0.13
DDX55-201ENST00000238146 A0A1B0GTW7 788 aa15.83■□□□□ 0.13
DDX55-201ENST00000238146 C2P06681 752 aa15.83■□□□□ 0.13
DDX55-201ENST00000238146 ME2P23368 584 aa15.83■□□□□ 0.13
DDX55-201ENST00000238146 CCR10P46092 362 aa15.83■□□□□ 0.13
DDX55-201ENST00000238146 HSPA13P48723 471 aa15.83■□□□□ 0.13
DDX55-201ENST00000238146 ITGA7Q13683 1181 aa15.83■□□□□ 0.13
DDX55-201ENST00000238146 TMEM132DQ14C87 1099 aa15.83■□□□□ 0.13
DDX55-201ENST00000238146 AMIGO2Q86SJ2 522 aa15.83■□□□□ 0.13
DDX55-201ENST00000238146 CPSF7Q8N684 471 aaKnown RBP15.83■□□□□ 0.13
DDX55-201ENST00000238146 TMEM102Q8N9M5 508 aaPredicted RBP15.83■□□□□ 0.13
DDX55-201ENST00000238146 GAB3Q8WWW8 586 aa15.83■□□□□ 0.13
DDX55-201ENST00000238146 IRGQQ8WZA9 623 aa15.83■□□□□ 0.13
DDX55-201ENST00000238146 ZNF385DQ9H6B1 395 aa15.83■□□□□ 0.13
DDX55-201ENST00000238146 WDR41Q9HAD4 459 aa15.83■□□□□ 0.13
DDX55-201ENST00000238146 TIMMDC1Q9NPL8 285 aa15.83■□□□□ 0.13
DDX55-201ENST00000238146 PICK1Q9NRD5 415 aa15.83■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms