RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 LIASO43766 372 aa13.11□□□□□ -0.31
VAMP4-201ENST00000236192 HS6ST1O60243 411 aa13.11□□□□□ -0.31
VAMP4-201ENST00000236192 ICMTO60725 284 aa13.11□□□□□ -0.31
VAMP4-201ENST00000236192 LYPLA1O75608 230 aaPredicted RBP13.11□□□□□ -0.31
VAMP4-201ENST00000236192 ASNSP08243 561 aa13.11□□□□□ -0.31
VAMP4-201ENST00000236192 HSMCR30P0CW71 290 aa13.11□□□□□ -0.31
VAMP4-201ENST00000236192 AOC1P19801 751 aa13.11□□□□□ -0.31
VAMP4-201ENST00000236192 BTG3Q14201 252 aaPredicted RBP13.11□□□□□ -0.31
VAMP4-201ENST00000236192 IL17AQ16552 155 aa13.11□□□□□ -0.31
VAMP4-201ENST00000236192 DDR2Q16832 855 aa13.11□□□□□ -0.31
VAMP4-201ENST00000236192 ZNF284Q2VY69 593 aa13.11□□□□□ -0.31
VAMP4-201ENST00000236192 DCAF6Q58WW2 860 aa13.11□□□□□ -0.31
VAMP4-201ENST00000236192 EFHC2Q5JST6 749 aa13.11□□□□□ -0.31
VAMP4-201ENST00000236192 AARS2Q5JTZ9 985 aaKnown RBP13.11□□□□□ -0.31
VAMP4-201ENST00000236192 ZC3H7AQ8IWR0 971 aaKnown RBP13.11□□□□□ -0.31
VAMP4-201ENST00000236192 PACRGLQ8N7B6 248 aa13.11□□□□□ -0.31
VAMP4-201ENST00000236192 SLC35C1Q96A29 364 aa13.11□□□□□ -0.31
VAMP4-201ENST00000236192 KAZALD1Q96I82 304 aa13.11□□□□□ -0.31
VAMP4-201ENST00000236192 C8orf48Q96LL4 319 aa13.11□□□□□ -0.31
VAMP4-201ENST00000236192 GLT1D1Q96MS3 346 aa13.11□□□□□ -0.31
VAMP4-201ENST00000236192 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.11□□□□□ -0.31
VAMP4-201ENST00000236192 FETUBQ9UGM5 382 aa13.11□□□□□ -0.31
VAMP4-201ENST00000236192 MYBPC1Q00872 1141 aa13.11□□□□□ -0.31
VAMP4-201ENST00000236192 PLEKHG7Q6ZR37 379 aa13.11□□□□□ -0.31
VAMP4-201ENST00000236192 KRT28Q7Z3Y7 464 aa13.11□□□□□ -0.31
VAMP4-201ENST00000236192 P2RY8Q86VZ1 359 aa13.11□□□□□ -0.31
VAMP4-201ENST00000236192 RTFDC1Q9BY42 306 aaPredicted RBP13.11□□□□□ -0.31
VAMP4-201ENST00000236192 HESX1Q9UBX0 185 aa13.11□□□□□ -0.31
VAMP4-201ENST00000236192 TRMT6Q9UJA5 497 aaKnown RBP13.11□□□□□ -0.31
VAMP4-201ENST00000236192 SNX7Q9UNH6 387 aa13.11□□□□□ -0.31
VAMP4-201ENST00000236192 F5H423 210 aaPredicted RBP13.11□□□□□ -0.31
VAMP4-201ENST00000236192 HNF4AP41235 474 aa13.11□□□□□ -0.31
VAMP4-201ENST00000236192 NKX2-5P52952 324 aaPredicted RBP13.11□□□□□ -0.31
VAMP4-201ENST00000236192 LLGL2Q6P1M3 1020 aa13.11□□□□□ -0.31
VAMP4-201ENST00000236192 DCP2Q8IU60 420 aaKnown RBP13.11□□□□□ -0.31
VAMP4-201ENST00000236192 DYNLL2Q96FJ2 89 aa13.11□□□□□ -0.31
VAMP4-201ENST00000236192 RBBP8Q99708 897 aa13.11□□□□□ -0.31
VAMP4-201ENST00000236192 TRIM8Q9BZR9 551 aa13.11□□□□□ -0.31
VAMP4-201ENST00000236192 PNMA8BQ9ULN7 279 aaPredicted RBP13.11□□□□□ -0.31
VAMP4-201ENST00000236192 MYOCOSA0A1B0GUC4 107 aa13.11□□□□□ -0.31
VAMP4-201ENST00000236192 GCP02774 474 aa13.11□□□□□ -0.31
VAMP4-201ENST00000236192 ABCB1P08183 1280 aaPredicted RBP13.11□□□□□ -0.31
VAMP4-201ENST00000236192 USP17L8P0C7I0 530 aa13.11□□□□□ -0.31
VAMP4-201ENST00000236192 MERTKQ12866 999 aa13.11□□□□□ -0.31
VAMP4-201ENST00000236192 GRM2Q14416 872 aa13.11□□□□□ -0.31
VAMP4-201ENST00000236192 ZC3H12BQ5HYM0 836 aaKnown RBP13.11□□□□□ -0.31
VAMP4-201ENST00000236192 EFL1Q7Z2Z2 1120 aaKnown RBP13.11□□□□□ -0.31
VAMP4-201ENST00000236192 C7orf43Q8WVR3 580 aa13.11□□□□□ -0.31
VAMP4-201ENST00000236192 TXLNGYQ9BZA5 131 aa13.11□□□□□ -0.31
VAMP4-201ENST00000236192 NGRNQ9NPE2 291 aaKnown RBP13.11□□□□□ -0.31
VAMP4-201ENST00000236192 ADAM30Q9UKF2 790 aa13.11□□□□□ -0.31
VAMP4-201ENST00000236192 NDUFS2O75306 463 aa13.1□□□□□ -0.31
VAMP4-201ENST00000236192 GRIK1P39086 918 aa13.1□□□□□ -0.31
VAMP4-201ENST00000236192 FAXCQ5TGI0 409 aa13.1□□□□□ -0.31
VAMP4-201ENST00000236192 ANGEL2Q5VTE6 544 aaKnown RBP13.1□□□□□ -0.31
VAMP4-201ENST00000236192 C12orf65Q9H3J6 166 aaKnown RBP13.1□□□□□ -0.31
VAMP4-201ENST00000236192 ANKHQ9HCJ1 492 aa13.1□□□□□ -0.31
VAMP4-201ENST00000236192 CCNB1IP1Q9NPC3 277 aa13.1□□□□□ -0.31
VAMP4-201ENST00000236192 FAM49BQ9NUQ9 324 aa13.1□□□□□ -0.31
VAMP4-201ENST00000236192 PNPOQ9NVS9 261 aa13.1□□□□□ -0.31
VAMP4-201ENST00000236192 PEX16Q9Y5Y5 336 aa13.1□□□□□ -0.31
VAMP4-201ENST00000236192 LOC100506127A0A0U1RQW1 187 aa13.1□□□□□ -0.31
VAMP4-201ENST00000236192 MARSP56192 900 aaKnown RBP13.1□□□□□ -0.31
VAMP4-201ENST00000236192 PPATQ06203 517 aa13.1□□□□□ -0.31
VAMP4-201ENST00000236192 TBC1D10BQ4KMP7 808 aaPredicted RBP13.1□□□□□ -0.31
VAMP4-201ENST00000236192 STYK1Q6J9G0 422 aa13.1□□□□□ -0.31
VAMP4-201ENST00000236192 RNF135Q8IUD6 432 aa13.1□□□□□ -0.31
VAMP4-201ENST00000236192 HACE1Q8IYU2 909 aa13.1□□□□□ -0.31
VAMP4-201ENST00000236192 TP53INP1Q96A56 240 aa13.1□□□□□ -0.31
VAMP4-201ENST00000236192 CPVLQ9H3G5 476 aa13.1□□□□□ -0.31
VAMP4-201ENST00000236192 MAN1C1Q9NR34 630 aa13.1□□□□□ -0.31
VAMP4-201ENST00000236192 MLXQ9UH92 298 aa13.1□□□□□ -0.31
VAMP4-201ENST00000236192 PLCL2Q9UPR0 1127 aa13.1□□□□□ -0.31
VAMP4-201ENST00000236192 RFPL2O75678 378 aa13.1□□□□□ -0.31
VAMP4-201ENST00000236192 RAD51Q06609 339 aa13.1□□□□□ -0.31
VAMP4-201ENST00000236192 MPP2Q14168 576 aa13.1□□□□□ -0.31
VAMP4-201ENST00000236192 ERAP2Q6P179 960 aa13.1□□□□□ -0.31
VAMP4-201ENST00000236192 DPP8Q6V1X1 898 aaPredicted RBP13.1□□□□□ -0.31
VAMP4-201ENST00000236192 ADPRHL2Q9NX46 363 aa13.1□□□□□ -0.31
VAMP4-201ENST00000236192 PFDN2Q9UHV9 154 aa13.1□□□□□ -0.31
VAMP4-201ENST00000236192 MAD2L2Q9UI95 211 aa13.1□□□□□ -0.31
VAMP4-201ENST00000236192 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.1□□□□□ -0.31
VAMP4-201ENST00000236192 A2ML1A8K2U0 1454 aa13.1□□□□□ -0.31
VAMP4-201ENST00000236192 RAB39AQ14964 217 aa13.1□□□□□ -0.31
VAMP4-201ENST00000236192 SLC30A10Q6XR72 485 aa13.1□□□□□ -0.31
VAMP4-201ENST00000236192 SLC47A2Q86VL8 602 aa13.1□□□□□ -0.31
VAMP4-201ENST00000236192 UBR7Q8N806 425 aa13.1□□□□□ -0.31
VAMP4-201ENST00000236192 OR2T34Q8NGX1 318 aa13.1□□□□□ -0.31
VAMP4-201ENST00000236192 OR2T3Q8NH03 318 aa13.1□□□□□ -0.31
VAMP4-201ENST00000236192 NSUN6Q8TEA1 469 aaKnown RBP13.1□□□□□ -0.31
VAMP4-201ENST00000236192 PKP2Q99959 881 aa13.1□□□□□ -0.31
VAMP4-201ENST00000236192 UGT2B28Q9BY64 529 aa13.1□□□□□ -0.31
VAMP4-201ENST00000236192 CPNE5Q9HCH3 593 aa13.1□□□□□ -0.31
VAMP4-201ENST00000236192 BLOC1S4Q9NUP1 217 aa13.1□□□□□ -0.31
VAMP4-201ENST00000236192 NCKIPSDQ9NZQ3 722 aa13.1□□□□□ -0.31
VAMP4-201ENST00000236192 CDH9Q9ULB4 789 aa13.1□□□□□ -0.31
VAMP4-201ENST00000236192 FAM205AQ6ZU69 1335 aa13.1□□□□□ -0.31
VAMP4-201ENST00000236192 BANF1O75531 89 aa13.09□□□□□ -0.31
VAMP4-201ENST00000236192 ETS1P14921 441 aa13.09□□□□□ -0.31
VAMP4-201ENST00000236192 MZF1P28698 734 aaPredicted RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms