RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 OSBPL2Q9H1P3 480 aa13.05□□□□□ -0.32
LSM5-201ENST00000223084 TMEM245Q9H330 911 aa13.05□□□□□ -0.32
LSM5-201ENST00000223084 ZNHIT6Q9NWK9 470 aaKnown RBP13.05□□□□□ -0.32
LSM5-201ENST00000223084 OR12D3Q9UGF7 316 aa13.05□□□□□ -0.32
LSM5-201ENST00000223084 ERVW-1Q9UQF0 538 aa13.05□□□□□ -0.32
LSM5-201ENST00000223084 MUC22E2RYF6 1773 aaPredicted RBP13.04□□□□□ -0.32
LSM5-201ENST00000223084 SYNCRIPO60506 623 aaKnown RBP13.04□□□□□ -0.32
LSM5-201ENST00000223084 LRIG2O94898 1065 aa13.04□□□□□ -0.32
LSM5-201ENST00000223084 MOCS3O95396 460 aa13.04□□□□□ -0.32
LSM5-201ENST00000223084 RHOCP08134 193 aa13.04□□□□□ -0.32
LSM5-201ENST00000223084 BCKDHBP21953 392 aa13.04□□□□□ -0.32
LSM5-201ENST00000223084 STK19P49842 368 aaPredicted RBP13.04□□□□□ -0.32
LSM5-201ENST00000223084 PLK1P53350 603 aa13.04□□□□□ -0.32
LSM5-201ENST00000223084 GALCP54803 685 aa13.04□□□□□ -0.32
LSM5-201ENST00000223084 STARD3Q14849 445 aa13.04□□□□□ -0.32
LSM5-201ENST00000223084 ASTE1Q2TB18 679 aaPredicted RBP13.04□□□□□ -0.32
LSM5-201ENST00000223084 USP39Q53GS9 565 aaKnown RBP13.04□□□□□ -0.32
LSM5-201ENST00000223084 MANEALQ5VSG8 457 aa13.04□□□□□ -0.32
LSM5-201ENST00000223084 DAB2IPQ5VWQ8 1189 aa13.04□□□□□ -0.32
LSM5-201ENST00000223084 RWDD4Q6NW29 188 aaKnown RBP13.04□□□□□ -0.32
LSM5-201ENST00000223084 KBTBD6Q86V97 674 aa13.04□□□□□ -0.32
LSM5-201ENST00000223084 DCLK2Q8N568 766 aa13.04□□□□□ -0.32
LSM5-201ENST00000223084 FAM160A2Q8N612 972 aaPredicted RBP13.04□□□□□ -0.32
LSM5-201ENST00000223084 NTAN1Q96AB6 310 aa13.04□□□□□ -0.32
LSM5-201ENST00000223084 ALG14Q96F25 216 aa13.04□□□□□ -0.32
LSM5-201ENST00000223084 BTBD6Q96KE9 485 aa13.04□□□□□ -0.32
LSM5-201ENST00000223084 FEM1AQ9BSK4 669 aa13.04□□□□□ -0.32
LSM5-201ENST00000223084 PACSIN1Q9BY11 444 aa13.04□□□□□ -0.32
LSM5-201ENST00000223084 DEF6Q9H4E7 631 aa13.04□□□□□ -0.32
LSM5-201ENST00000223084 MRPL47Q9HD33 250 aaKnown RBP13.04□□□□□ -0.32
LSM5-201ENST00000223084 CD93Q9NPY3 652 aa13.04□□□□□ -0.32
LSM5-201ENST00000223084 GPATCH2LQ9NWQ4 482 aa13.04□□□□□ -0.32
LSM5-201ENST00000223084 ZNF212Q9UDV6 495 aa13.04□□□□□ -0.32
LSM5-201ENST00000223084 PCSK1NQ9UHG2 260 aa13.04□□□□□ -0.32
LSM5-201ENST00000223084 SLCO3A1Q9UIG8 710 aa13.04□□□□□ -0.32
LSM5-201ENST00000223084 FZD10Q9ULW2 581 aa13.04□□□□□ -0.32
LSM5-201ENST00000223084 TBC1D30Q9Y2I9 924 aa13.04□□□□□ -0.32
LSM5-201ENST00000223084 SCINQ9Y6U3 715 aa13.04□□□□□ -0.32
LSM5-201ENST00000223084 MYO15AQ9UKN7 3530 aa13.04□□□□□ -0.32
LSM5-201ENST00000223084 THADAQ6YHU6 1953 aa13.03□□□□□ -0.32
LSM5-201ENST00000223084 A0A0D9SEW6 157 aa13.03□□□□□ -0.32
LSM5-201ENST00000223084 SSU72P8A0A1W2PR75 194 aa13.03□□□□□ -0.32
LSM5-201ENST00000223084 TTC34A8MYJ7 566 aa13.03□□□□□ -0.32
LSM5-201ENST00000223084 ZBTB24O43167 697 aaPredicted RBP13.03□□□□□ -0.32
LSM5-201ENST00000223084 AKR1B10O60218 316 aa13.03□□□□□ -0.32
LSM5-201ENST00000223084 ASLP04424 464 aa13.03□□□□□ -0.32
LSM5-201ENST00000223084 CYP1A2P05177 515 aa13.03□□□□□ -0.32
LSM5-201ENST00000223084 OR1E1P30953 314 aa13.03□□□□□ -0.32
LSM5-201ENST00000223084 ECT2LQ008S8 904 aa13.03□□□□□ -0.32
LSM5-201ENST00000223084 SCAPQ12770 1279 aa13.03□□□□□ -0.32
LSM5-201ENST00000223084 SLC12A1Q13621 1099 aa13.03□□□□□ -0.32
LSM5-201ENST00000223084 E2F5Q15329 346 aa13.03□□□□□ -0.32
LSM5-201ENST00000223084 SLC18A3Q16572 532 aa13.03□□□□□ -0.32
LSM5-201ENST00000223084 ACBD5Q5T8D3 534 aaPredicted RBP13.03□□□□□ -0.32
LSM5-201ENST00000223084 KIAA1324Q6UXG2 1013 aaKnown RBP13.03□□□□□ -0.32
LSM5-201ENST00000223084 CACUL1Q86Y37 369 aa13.03□□□□□ -0.32
LSM5-201ENST00000223084 CNGA4Q8IV77 575 aa13.03□□□□□ -0.32
LSM5-201ENST00000223084 TC2NQ8N9U0 490 aa13.03□□□□□ -0.32
LSM5-201ENST00000223084 OR7D4Q8NG98 312 aa13.03□□□□□ -0.32
LSM5-201ENST00000223084 FNIP1Q8TF40 1166 aa13.03□□□□□ -0.32
LSM5-201ENST00000223084 MRGPRX1Q96LB2 322 aa13.03□□□□□ -0.32
LSM5-201ENST00000223084 PEBP4Q96S96 227 aa13.03□□□□□ -0.32
LSM5-201ENST00000223084 PSMB7Q99436 277 aa13.03□□□□□ -0.32
LSM5-201ENST00000223084 NUP85Q9BW27 656 aa13.03□□□□□ -0.32
LSM5-201ENST00000223084 ZYG11BQ9C0D3 744 aa13.03□□□□□ -0.32
LSM5-201ENST00000223084 MKRN2Q9H000 416 aaKnown RBP13.03□□□□□ -0.32
LSM5-201ENST00000223084 MUC3BQ9H195 1237 aa13.03□□□□□ -0.32
LSM5-201ENST00000223084 NHEJ1Q9H9Q4 299 aaPredicted RBP13.03□□□□□ -0.32
LSM5-201ENST00000223084 PRSS16Q9NQE7 514 aa13.03□□□□□ -0.32
LSM5-201ENST00000223084 SPTLC3Q9NUV7 552 aa13.03□□□□□ -0.32
LSM5-201ENST00000223084 PPARGC1AQ9UBK2 798 aaKnown RBP13.03□□□□□ -0.32
LSM5-201ENST00000223084 VPS28Q9UK41 221 aa13.03□□□□□ -0.32
LSM5-201ENST00000223084 RAB23Q9ULC3 237 aa13.03□□□□□ -0.32
LSM5-201ENST00000223084 NEU3Q9UQ49 428 aa13.03□□□□□ -0.32
LSM5-201ENST00000223084 OR51B4Q9Y5P0 310 aa13.03□□□□□ -0.32
LSM5-201ENST00000223084 CREB3O43889 395 aa13.02□□□□□ -0.33
LSM5-201ENST00000223084 SNAP91O60641 907 aa13.02□□□□□ -0.33
LSM5-201ENST00000223084 RNF8O76064 485 aa13.02□□□□□ -0.33
LSM5-201ENST00000223084 SRPRAP08240 638 aaKnown RBP13.02□□□□□ -0.33
LSM5-201ENST00000223084 DESP17661 470 aa13.02□□□□□ -0.33
LSM5-201ENST00000223084 MIPP30301 263 aa13.02□□□□□ -0.33
LSM5-201ENST00000223084 P2RY2P41231 377 aa13.02□□□□□ -0.33
LSM5-201ENST00000223084 COPAP53621 1224 aa13.02□□□□□ -0.33
LSM5-201ENST00000223084 OXCT1P55809 520 aa13.02□□□□□ -0.33
LSM5-201ENST00000223084 ST8SIA6P61647 398 aa13.02□□□□□ -0.33
LSM5-201ENST00000223084 NRG1Q02297 640 aaPredicted RBP13.02□□□□□ -0.33
LSM5-201ENST00000223084 CAMK2GQ13555 558 aaPredicted RBP13.02□□□□□ -0.33
LSM5-201ENST00000223084 NUMA1Q14980 2115 aa13.02□□□□□ -0.33
LSM5-201ENST00000223084 CA9Q16790 459 aa13.02□□□□□ -0.33
LSM5-201ENST00000223084 MAP7D1Q3KQU3 841 aa13.02□□□□□ -0.33
LSM5-201ENST00000223084 PLK5Q496M5 336 aa13.02□□□□□ -0.33
LSM5-201ENST00000223084 EFHC2Q5JST6 749 aa13.02□□□□□ -0.33
LSM5-201ENST00000223084 NLRP14Q86W24 1093 aa13.02□□□□□ -0.33
LSM5-201ENST00000223084 TMPRSS6Q8IU80 811 aa13.02□□□□□ -0.33
LSM5-201ENST00000223084 TBC1D31Q96DN5 1066 aa13.02□□□□□ -0.33
LSM5-201ENST00000223084 MRFAP1L1Q96HT8 127 aa13.02□□□□□ -0.33
LSM5-201ENST00000223084 CCDC42Q96M95 316 aa13.02□□□□□ -0.33
LSM5-201ENST00000223084 HINFPQ9BQA5 517 aa13.02□□□□□ -0.33
LSM5-201ENST00000223084 DUSP15Q9H1R2 295 aaPredicted RBP13.02□□□□□ -0.33
LSM5-201ENST00000223084 PRDM16Q9HAZ2 1276 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms