RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 GEMP55040 296 aa9.62□□□□□ -0.87
CCDC113-201ENST00000219299 KIF19Q2TAC6 998 aa9.62□□□□□ -0.87
CCDC113-201ENST00000219299 RFX8Q6ZV50 586 aa9.62□□□□□ -0.87
CCDC113-201ENST00000219299 SLC26A9Q7LBE3 791 aa9.62□□□□□ -0.87
CCDC113-201ENST00000219299 FUKQ8N0W3 1084 aa9.62□□□□□ -0.87
CCDC113-201ENST00000219299 DQX1Q8TE96 717 aaKnown RBP9.62□□□□□ -0.87
CCDC113-201ENST00000219299 LRRN4Q8WUT4 740 aa9.62□□□□□ -0.87
CCDC113-201ENST00000219299 HTR3CQ8WXA8 447 aa9.62□□□□□ -0.87
CCDC113-201ENST00000219299 DCUN1D1Q96GG9 259 aa9.62□□□□□ -0.87
CCDC113-201ENST00000219299 ANKRD27Q96NW4 1050 aa9.62□□□□□ -0.87
CCDC113-201ENST00000219299 ADA2Q9NZK5 511 aa9.62□□□□□ -0.87
CCDC113-201ENST00000219299 MPP6Q9NZW5 540 aa9.62□□□□□ -0.87
CCDC113-201ENST00000219299 TULP2O00295 520 aa9.62□□□□□ -0.87
CCDC113-201ENST00000219299 SLC9A3R1O14745 358 aaPredicted RBP9.62□□□□□ -0.87
CCDC113-201ENST00000219299 SERPINF2P08697 491 aa9.62□□□□□ -0.87
CCDC113-201ENST00000219299 RBL1P28749 1068 aa9.62□□□□□ -0.87
CCDC113-201ENST00000219299 NSUN2Q08J23 767 aaKnown RBP eCLIP9.62□□□□□ -0.87
CCDC113-201ENST00000219299 ARHGAP17Q68EM7 881 aa9.62□□□□□ -0.87
CCDC113-201ENST00000219299 CRYBG2Q8N1P7 616 aa9.62□□□□□ -0.87
CCDC113-201ENST00000219299 TTC30BQ8N4P2 665 aa9.62□□□□□ -0.87
CCDC113-201ENST00000219299 ALG3Q92685 438 aa9.62□□□□□ -0.87
CCDC113-201ENST00000219299 MCRS1Q96EZ8 462 aa9.62□□□□□ -0.87
CCDC113-201ENST00000219299 FUBP3Q96I24 572 aaKnown RBP eCLIP9.62□□□□□ -0.87
CCDC113-201ENST00000219299 RAD9AQ99638 391 aa9.62□□□□□ -0.87
CCDC113-201ENST00000219299 HAPLN2Q9GZV7 340 aa9.62□□□□□ -0.87
CCDC113-201ENST00000219299 C20orf96Q9NUD7 363 aaPredicted RBP9.62□□□□□ -0.87
CCDC113-201ENST00000219299 PIH1D1Q9NWS0 290 aaKnown RBP9.62□□□□□ -0.87
CCDC113-201ENST00000219299 AAR2Q9Y312 384 aaKnown RBP9.62□□□□□ -0.87
CCDC113-201ENST00000219299 GOLGA8RI6L899 631 aa9.61□□□□□ -0.87
CCDC113-201ENST00000219299 APOC4-APOC2K7ER74 178 aa9.61□□□□□ -0.87
CCDC113-201ENST00000219299 SYNCRIPO60506 623 aaKnown RBP9.61□□□□□ -0.87
CCDC113-201ENST00000219299 NDUFS3O75489 264 aa9.61□□□□□ -0.87
CCDC113-201ENST00000219299 APOC2P02655 101 aa9.61□□□□□ -0.87
CCDC113-201ENST00000219299 POLBP06746 335 aa9.61□□□□□ -0.87
CCDC113-201ENST00000219299 NQO1P15559 274 aaKnown RBP9.61□□□□□ -0.87
CCDC113-201ENST00000219299 TGM2P21980 687 aa9.61□□□□□ -0.87
CCDC113-201ENST00000219299 FDFT1P37268 417 aa9.61□□□□□ -0.87
CCDC113-201ENST00000219299 MTA1Q13330 715 aa9.61□□□□□ -0.87
CCDC113-201ENST00000219299 EFTUD2Q15029 972 aaKnown RBP eCLIP9.61□□□□□ -0.87
CCDC113-201ENST00000219299 CYTH1Q15438 398 aa9.61□□□□□ -0.87
CCDC113-201ENST00000219299 MAPRE2Q15555 327 aa9.61□□□□□ -0.87
CCDC113-201ENST00000219299 LRRC38Q5VT99 294 aa9.61□□□□□ -0.87
CCDC113-201ENST00000219299 C4orf22Q6V702 233 aa9.61□□□□□ -0.87
CCDC113-201ENST00000219299 OSTM1Q86WC4 334 aa9.61□□□□□ -0.87
CCDC113-201ENST00000219299 CFAP52Q8N1V2 620 aa9.61□□□□□ -0.87
CCDC113-201ENST00000219299 KIF2BQ8N4N8 673 aa9.61□□□□□ -0.87
CCDC113-201ENST00000219299 TTC8Q8TAM2 541 aa9.61□□□□□ -0.87
CCDC113-201ENST00000219299 FAXDC2Q96IV6 333 aa9.61□□□□□ -0.87
CCDC113-201ENST00000219299 FRMD8P1Q9BZ68 369 aaPredicted RBP9.61□□□□□ -0.87
CCDC113-201ENST00000219299 IL23AQ9NPF7 189 aa9.61□□□□□ -0.87
CCDC113-201ENST00000219299 DDX28Q9NUL7 540 aaKnown RBP9.61□□□□□ -0.87
CCDC113-201ENST00000219299 WBP1LQ9NX94 342 aa9.61□□□□□ -0.87
CCDC113-201ENST00000219299 ZNF229Q9UJW7 825 aa9.61□□□□□ -0.87
CCDC113-201ENST00000219299 TSC22D4Q9Y3Q8 395 aa9.61□□□□□ -0.87
CCDC113-201ENST00000219299 PER2O15055 1255 aa9.61□□□□□ -0.87
CCDC113-201ENST00000219299 ANP32DO95626 131 aa9.61□□□□□ -0.87
CCDC113-201ENST00000219299 CFHP08603 1231 aa9.61□□□□□ -0.87
CCDC113-201ENST00000219299 MRPS15P82914 257 aaKnown RBP9.61□□□□□ -0.87
CCDC113-201ENST00000219299 NPNTQ6UXI9 565 aa9.61□□□□□ -0.87
CCDC113-201ENST00000219299 MON1BQ7L1V2 547 aa9.61□□□□□ -0.87
CCDC113-201ENST00000219299 GET4Q7L5D6 327 aaPredicted RBP9.61□□□□□ -0.87
CCDC113-201ENST00000219299 CSGALNACT1Q8TDX6 532 aa9.61□□□□□ -0.87
CCDC113-201ENST00000219299 CLEC4CQ8WTT0 213 aa9.61□□□□□ -0.87
CCDC113-201ENST00000219299 RNF157Q96PX1 679 aa9.61□□□□□ -0.87
CCDC113-201ENST00000219299 BBS2Q9BXC9 721 aa9.61□□□□□ -0.87
CCDC113-201ENST00000219299 PRDM12Q9H4Q4 367 aa9.61□□□□□ -0.87
CCDC113-201ENST00000219299 CCDC134Q9H6E4 229 aa9.61□□□□□ -0.87
CCDC113-201ENST00000219299 GDAP2Q9NXN4 497 aa9.61□□□□□ -0.87
CCDC113-201ENST00000219299 AFF4Q9UHB7 1163 aaKnown RBP9.61□□□□□ -0.87
CCDC113-201ENST00000219299 RREB1Q92766 1687 aa9.61□□□□□ -0.87
CCDC113-201ENST00000219299 CCDC195A0A1B0GUA6 201 aa9.61□□□□□ -0.87
CCDC113-201ENST00000219299 ZSCAN5CA6NGD5 496 aaPredicted RBP9.61□□□□□ -0.87
CCDC113-201ENST00000219299 C9IYK1 514 aa9.61□□□□□ -0.87
CCDC113-201ENST00000219299 RNF103O00237 685 aa9.61□□□□□ -0.87
CCDC113-201ENST00000219299 SCTRP47872 440 aa9.61□□□□□ -0.87
CCDC113-201ENST00000219299 WNT7BP56706 349 aa9.61□□□□□ -0.87
CCDC113-201ENST00000219299 NAIF1Q69YI7 327 aaPredicted RBP9.61□□□□□ -0.87
CCDC113-201ENST00000219299 LINC00523Q86TU6 105 aa9.61□□□□□ -0.87
CCDC113-201ENST00000219299 KLHDC9Q8NEP7 349 aa9.61□□□□□ -0.87
CCDC113-201ENST00000219299 OR2W6PQ8NHA6 318 aa9.61□□□□□ -0.87
CCDC113-201ENST00000219299 STK32AQ8WU08 396 aa9.61□□□□□ -0.87
CCDC113-201ENST00000219299 MTBPQ96DY7 904 aa9.61□□□□□ -0.87
CCDC113-201ENST00000219299 OXCT2Q9BYC2 517 aaPredicted RBP9.61□□□□□ -0.87
CCDC113-201ENST00000219299 SDCBP2Q9H190 292 aa9.61□□□□□ -0.87
CCDC113-201ENST00000219299 SCUBE2Q9NQ36 999 aa9.61□□□□□ -0.87
CCDC113-201ENST00000219299 IL1RAPL1Q9NZN1 696 aa9.61□□□□□ -0.87
CCDC113-201ENST00000219299 CFAP97Q9P2B7 532 aa9.61□□□□□ -0.87
CCDC113-201ENST00000219299 LZTS1Q9Y250 596 aa9.61□□□□□ -0.87
CCDC113-201ENST00000219299 MTO1Q9Y2Z2 717 aaKnown RBP9.61□□□□□ -0.87
CCDC113-201ENST00000219299 PKP3Q9Y446 797 aa9.61□□□□□ -0.87
CCDC113-201ENST00000219299 PIRO00625 290 aa9.61□□□□□ -0.87
CCDC113-201ENST00000219299 PAGE1O75459 146 aa9.61□□□□□ -0.87
CCDC113-201ENST00000219299 E2F6O75461 281 aa9.61□□□□□ -0.87
CCDC113-201ENST00000219299 SYF2O95926 243 aaKnown RBP9.61□□□□□ -0.87
CCDC113-201ENST00000219299 ENO1P06733 434 aaKnown RBP9.61□□□□□ -0.87
CCDC113-201ENST00000219299 LRPAP1P30533 357 aa9.61□□□□□ -0.87
CCDC113-201ENST00000219299 DAOAP59103 153 aa9.61□□□□□ -0.87
CCDC113-201ENST00000219299 MFSD5Q6N075 450 aa9.61□□□□□ -0.87
CCDC113-201ENST00000219299 CLEC20AQ6ZU45 233 aa9.61□□□□□ -0.87
CCDC113-201ENST00000219299 STRADAQ7RTN6 431 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms