RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 TTC9BQ8N6N2 239 aa10.22□□□□□ -0.77
USP11-201ENST00000218348 ZNF75CPQ92670 426 aaPredicted RBP10.22□□□□□ -0.77
USP11-201ENST00000218348 RTP3Q9BQQ7 232 aa10.22□□□□□ -0.77
USP11-201ENST00000218348 UNKQ9C0B0 810 aaKnown RBP10.22□□□□□ -0.77
USP11-201ENST00000218348 PLAC1Q9HBJ0 212 aa10.22□□□□□ -0.77
USP11-201ENST00000218348 OR12D3Q9UGF7 316 aa10.22□□□□□ -0.77
USP11-201ENST00000218348 BAIAP2L1Q9UHR4 511 aa10.22□□□□□ -0.77
USP11-201ENST00000218348 FBXO9Q9UK97 447 aaPredicted RBP10.22□□□□□ -0.77
USP11-201ENST00000218348 ZMYND8Q9ULU4 1186 aaPredicted RBP10.22□□□□□ -0.77
USP11-201ENST00000218348 FNDC1Q4ZHG4 1894 aaPredicted RBP10.22□□□□□ -0.77
USP11-201ENST00000218348 BCLAF3A2AJT9 711 aaKnown RBP10.22□□□□□ -0.77
USP11-201ENST00000218348 GABRDO14764 452 aa10.22□□□□□ -0.77
USP11-201ENST00000218348 CHADO15335 359 aa10.22□□□□□ -0.77
USP11-201ENST00000218348 JCHAINP01591 159 aa10.22□□□□□ -0.77
USP11-201ENST00000218348 LINGO3P0C6S8 592 aa10.22□□□□□ -0.77
USP11-201ENST00000218348 LRPAP1P30533 357 aa10.22□□□□□ -0.77
USP11-201ENST00000218348 ROR2Q01974 943 aaKnown RBP10.22□□□□□ -0.77
USP11-201ENST00000218348 ADGRD1Q6QNK2 874 aa10.22□□□□□ -0.77
USP11-201ENST00000218348 VSIG1Q86XK7 387 aa10.22□□□□□ -0.77
USP11-201ENST00000218348 CENPIQ92674 756 aaPredicted RBP10.22□□□□□ -0.77
USP11-201ENST00000218348 ERP27Q96DN0 273 aa10.22□□□□□ -0.77
USP11-201ENST00000218348 ABHD8Q96I13 439 aa10.22□□□□□ -0.77
USP11-201ENST00000218348 PAWRQ96IZ0 340 aaKnown RBP10.22□□□□□ -0.77
USP11-201ENST00000218348 C11orf49Q9H6J7 331 aa10.22□□□□□ -0.77
USP11-201ENST00000218348 ECT2Q9H8V3 914 aa10.22□□□□□ -0.77
USP11-201ENST00000218348 PREBQ9HCU5 417 aa10.22□□□□□ -0.77
USP11-201ENST00000218348 SLC24A2Q9UI40 661 aa10.22□□□□□ -0.77
USP11-201ENST00000218348 PSAT1Q9Y617 370 aa10.22□□□□□ -0.77
USP11-201ENST00000218348 A8MUI8 341 aa10.21□□□□□ -0.77
USP11-201ENST00000218348 SCAMP3O14828 347 aaKnown RBP10.21□□□□□ -0.77
USP11-201ENST00000218348 TYROBPO43914 113 aa10.21□□□□□ -0.77
USP11-201ENST00000218348 TARSP26639 723 aaKnown RBP10.21□□□□□ -0.77
USP11-201ENST00000218348 ZNF534Q76KX8 674 aa10.21□□□□□ -0.77
USP11-201ENST00000218348 STRADAQ7RTN6 431 aa10.21□□□□□ -0.77
USP11-201ENST00000218348 TAC4Q86UU9 113 aa10.21□□□□□ -0.77
USP11-201ENST00000218348 METTL23Q86XA0 190 aa10.21□□□□□ -0.77
USP11-201ENST00000218348 RFWD2Q8NHY2 731 aa10.21□□□□□ -0.77
USP11-201ENST00000218348 C11orf84Q9BUA3 381 aaPredicted RBP10.21□□□□□ -0.77
USP11-201ENST00000218348 STARD7Q9NQZ5 370 aa10.21□□□□□ -0.77
USP11-201ENST00000218348 SYBUQ9NX95 663 aa10.21□□□□□ -0.77
USP11-201ENST00000218348 MKS1Q9NXB0 559 aa10.21□□□□□ -0.77
USP11-201ENST00000218348 MPP6Q9NZW5 540 aa10.21□□□□□ -0.77
USP11-201ENST00000218348 SLC27A5Q9Y2P5 690 aa10.21□□□□□ -0.77
USP11-201ENST00000218348 SHROOM3Q8TF72 1996 aa10.21□□□□□ -0.77
USP11-201ENST00000218348 TRIM43BA6NCK2 446 aa10.21□□□□□ -0.78
USP11-201ENST00000218348 E7ESA3 106 aa10.21□□□□□ -0.78
USP11-201ENST00000218348 COPEO14579 308 aa10.21□□□□□ -0.78
USP11-201ENST00000218348 MAP3K13O43283 966 aa10.21□□□□□ -0.78
USP11-201ENST00000218348 DAB1O75553 588 aa10.21□□□□□ -0.78
USP11-201ENST00000218348 DDHD2O94830 711 aa10.21□□□□□ -0.78
USP11-201ENST00000218348 TBX18O95935 607 aa10.21□□□□□ -0.78
USP11-201ENST00000218348 CKBP12277 381 aa10.21□□□□□ -0.78
USP11-201ENST00000218348 ALOX15P16050 662 aaPredicted RBP10.21□□□□□ -0.78
USP11-201ENST00000218348 LHX1P48742 406 aa10.21□□□□□ -0.78
USP11-201ENST00000218348 CUL3Q13618 768 aa10.21□□□□□ -0.78
USP11-201ENST00000218348 TSNAXIP1Q2TAA8 658 aa10.21□□□□□ -0.78
USP11-201ENST00000218348 TRIM60Q495X7 471 aa10.21□□□□□ -0.78
USP11-201ENST00000218348 OTOP3Q7RTS5 596 aa10.21□□□□□ -0.78
USP11-201ENST00000218348 OTOAQ7RTW8 1153 aa10.21□□□□□ -0.78
USP11-201ENST00000218348 NDUFAF2Q8N183 169 aa10.21□□□□□ -0.78
USP11-201ENST00000218348 TTC30BQ8N4P2 665 aa10.21□□□□□ -0.78
USP11-201ENST00000218348 MAB21L3Q8N8X9 362 aa10.21□□□□□ -0.78
USP11-201ENST00000218348 DENND1AQ8TEH3 1009 aa10.21□□□□□ -0.78
USP11-201ENST00000218348 TRIM43Q96BQ3 446 aaPredicted RBP10.21□□□□□ -0.78
USP11-201ENST00000218348 COLEC11Q9BWP8 271 aa10.21□□□□□ -0.78
USP11-201ENST00000218348 FRMD8P1Q9BZ68 369 aaPredicted RBP10.21□□□□□ -0.78
USP11-201ENST00000218348 GALNT8Q9NY28 637 aa10.21□□□□□ -0.78
USP11-201ENST00000218348 UTP6Q9NYH9 597 aaKnown RBP10.21□□□□□ -0.78
USP11-201ENST00000218348 ARL2BPQ9Y2Y0 163 aa10.21□□□□□ -0.78
USP11-201ENST00000218348 SZT2Q5T011 3432 aa10.21□□□□□ -0.78
USP11-201ENST00000218348 C5orf42Q9H799 3197 aa10.21□□□□□ -0.78
USP11-201ENST00000218348 GBF1Q92538 1859 aa10.21□□□□□ -0.78
USP11-201ENST00000218348 IQANK1A0A1B0GTG1 560 aa10.2□□□□□ -0.78
USP11-201ENST00000218348 TTC24A2A3L6 582 aaPredicted RBP10.2□□□□□ -0.78
USP11-201ENST00000218348 C9IYK1 514 aa10.2□□□□□ -0.78
USP11-201ENST00000218348 ZBTB24O43167 697 aaPredicted RBP10.2□□□□□ -0.78
USP11-201ENST00000218348 SMNDC1O75940 238 aaKnown RBP eCLIP10.2□□□□□ -0.78
USP11-201ENST00000218348 LRIG2O94898 1065 aa10.2□□□□□ -0.78
USP11-201ENST00000218348 CXCL10P02778 98 aa10.2□□□□□ -0.78
USP11-201ENST00000218348 ODC1P11926 461 aa10.2□□□□□ -0.78
USP11-201ENST00000218348 EML3Q32P44 896 aa10.2□□□□□ -0.78
USP11-201ENST00000218348 PPM1JQ5JR12 505 aa10.2□□□□□ -0.78
USP11-201ENST00000218348 TFAP2DQ7Z6R9 452 aa10.2□□□□□ -0.78
USP11-201ENST00000218348 SPATS2Q86XZ4 545 aaKnown RBP10.2□□□□□ -0.78
USP11-201ENST00000218348 MIB1Q86YT6 1006 aa10.2□□□□□ -0.78
USP11-201ENST00000218348 ATAD1Q8NBU5 361 aa10.2□□□□□ -0.78
USP11-201ENST00000218348 SPATA22Q8NHS9 363 aa10.2□□□□□ -0.78
USP11-201ENST00000218348 SLC44A1Q8WWI5 657 aa10.2□□□□□ -0.78
USP11-201ENST00000218348 MOCOSQ96EN8 888 aa10.2□□□□□ -0.78
USP11-201ENST00000218348 SMARCD1Q96GM5 515 aa10.2□□□□□ -0.78
USP11-201ENST00000218348 SIGLEC10Q96LC7 697 aa10.2□□□□□ -0.78
USP11-201ENST00000218348 GLT1D1Q96MS3 346 aa10.2□□□□□ -0.78
USP11-201ENST00000218348 QKIQ96PU8 341 aaKnown RBP eCLIP10.2□□□□□ -0.78
USP11-201ENST00000218348 DNAI2Q9GZS0 605 aa10.2□□□□□ -0.78
USP11-201ENST00000218348 ATG2AQ2TAZ0 1938 aa10.2□□□□□ -0.78
USP11-201ENST00000218348 UNC80Q8N2C7 3258 aa10.2□□□□□ -0.78
USP11-201ENST00000218348 MYO7AQ13402 2215 aa10.2□□□□□ -0.78
USP11-201ENST00000218348 A0A0A0MRY4 1105 aa10.2□□□□□ -0.78
USP11-201ENST00000218348 PITPNM1O00562 1244 aa10.2□□□□□ -0.78
USP11-201ENST00000218348 E2F6O75461 281 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms