RNA–Protein interactions for RNA: ENST00000216605.12

MTHFD1-201, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD1, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-201ENST00000216605 F9P00740 461 aa9.14□□□□□ -0.95
MTHFD1-201ENST00000216605 CD53P19397 219 aa9.14□□□□□ -0.95
MTHFD1-201ENST00000216605 ELK3P41970 407 aa9.14□□□□□ -0.95
MTHFD1-201ENST00000216605 SLC10A2Q12908 348 aaPredicted RBP9.14□□□□□ -0.95
MTHFD1-201ENST00000216605 MTFR1Q15390 333 aa9.14□□□□□ -0.95
MTHFD1-201ENST00000216605 MGAT5BQ3V5L5 792 aa9.14□□□□□ -0.95
MTHFD1-201ENST00000216605 FAM117BQ6P1L5 589 aa9.14□□□□□ -0.95
MTHFD1-201ENST00000216605 ZNF598Q86UK7 904 aaKnown RBP9.14□□□□□ -0.95
MTHFD1-201ENST00000216605 ZNF354CQ86Y25 554 aa9.14□□□□□ -0.95
MTHFD1-201ENST00000216605 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.14□□□□□ -0.95
MTHFD1-201ENST00000216605 HTR3CQ8WXA8 447 aa9.14□□□□□ -0.95
MTHFD1-201ENST00000216605 GRAMD1AQ96CP6 724 aa9.14□□□□□ -0.95
MTHFD1-201ENST00000216605 NAF1Q96HR8 494 aaKnown RBP9.14□□□□□ -0.95
MTHFD1-201ENST00000216605 SEPT5Q99719 369 aaPredicted RBP9.14□□□□□ -0.95
MTHFD1-201ENST00000216605 RTP3Q9BQQ7 232 aa9.14□□□□□ -0.95
MTHFD1-201ENST00000216605 PREBQ9HCU5 417 aa9.14□□□□□ -0.95
MTHFD1-201ENST00000216605 DTLQ9NZJ0 730 aa9.14□□□□□ -0.95
MTHFD1-201ENST00000216605 KLHL8Q9P2G9 620 aaPredicted RBP9.14□□□□□ -0.95
MTHFD1-201ENST00000216605 PRELID1Q9Y255 219 aa9.14□□□□□ -0.95
MTHFD1-201ENST00000216605 SQORQ9Y6N5 450 aa9.14□□□□□ -0.95
MTHFD1-201ENST00000216605 KCNK1O00180 336 aa9.13□□□□□ -0.95
MTHFD1-201ENST00000216605 ALOX15BO15296 676 aa9.13□□□□□ -0.95
MTHFD1-201ENST00000216605 MFSD11O43934 449 aa9.13□□□□□ -0.95
MTHFD1-201ENST00000216605 WFS1O76024 890 aa9.13□□□□□ -0.95
MTHFD1-201ENST00000216605 CREB1P16220 341 aa9.13□□□□□ -0.95
MTHFD1-201ENST00000216605 ERCC2P18074 760 aa9.13□□□□□ -0.95
MTHFD1-201ENST00000216605 STX2P32856 288 aa9.13□□□□□ -0.95
MTHFD1-201ENST00000216605 NR2C2P49116 596 aa9.13□□□□□ -0.95
MTHFD1-201ENST00000216605 SLC5A3P53794 718 aa9.13□□□□□ -0.95
MTHFD1-201ENST00000216605 OXCT1P55809 520 aa9.13□□□□□ -0.95
MTHFD1-201ENST00000216605 SMAD1Q15797 465 aaKnown RBP9.13□□□□□ -0.95
MTHFD1-201ENST00000216605 MSS51Q4VC12 460 aa9.13□□□□□ -0.95
MTHFD1-201ENST00000216605 NCBP2-AS2Q69YL0 99 aa9.13□□□□□ -0.95
MTHFD1-201ENST00000216605 ALKBH2Q6NS38 261 aa9.13□□□□□ -0.95
MTHFD1-201ENST00000216605 RFX8Q6ZV50 586 aa9.13□□□□□ -0.95
MTHFD1-201ENST00000216605 ARCQ7LC44 396 aa9.13□□□□□ -0.95
MTHFD1-201ENST00000216605 UBE2Q1Q7Z7E8 422 aa9.13□□□□□ -0.95
MTHFD1-201ENST00000216605 NAT8LQ8N9F0 302 aa9.13□□□□□ -0.95
MTHFD1-201ENST00000216605 COLEC11Q9BWP8 271 aa9.13□□□□□ -0.95
MTHFD1-201ENST00000216605 OXCT2Q9BYC2 517 aaPredicted RBP9.13□□□□□ -0.95
MTHFD1-201ENST00000216605 TXLNGQ9NUQ3 528 aa9.13□□□□□ -0.95
MTHFD1-201ENST00000216605 PIH1D1Q9NWS0 290 aaKnown RBP9.13□□□□□ -0.95
MTHFD1-201ENST00000216605 OR12D3Q9UGF7 316 aa9.13□□□□□ -0.95
MTHFD1-201ENST00000216605 PCDHB8Q9UN66 801 aa9.13□□□□□ -0.95
MTHFD1-201ENST00000216605 BOLA2-SMG1P6H3BVE0 249 aa9.13□□□□□ -0.95
MTHFD1-201ENST00000216605 M0QZQ0 153 aa9.13□□□□□ -0.95
MTHFD1-201ENST00000216605 PDK1Q15118 436 aa9.13□□□□□ -0.95
MTHFD1-201ENST00000216605 PABPC1LQ4VXU2 614 aaKnown RBP9.13□□□□□ -0.95
MTHFD1-201ENST00000216605 ASRGL1Q7L266 308 aa9.13□□□□□ -0.95
MTHFD1-201ENST00000216605 LMNTD2Q8IXW0 634 aa9.13□□□□□ -0.95
MTHFD1-201ENST00000216605 C4orf33Q8N1A6 199 aa9.13□□□□□ -0.95
MTHFD1-201ENST00000216605 FITM2Q8N6M3 262 aa9.13□□□□□ -0.95
MTHFD1-201ENST00000216605 ATAD1Q8NBU5 361 aa9.13□□□□□ -0.95
MTHFD1-201ENST00000216605 VPS37AQ8NEZ2 397 aa9.13□□□□□ -0.95
MTHFD1-201ENST00000216605 DEPDC1BQ8WUY9 529 aa9.13□□□□□ -0.95
MTHFD1-201ENST00000216605 CKAP2Q8WWK9 683 aa9.13□□□□□ -0.95
MTHFD1-201ENST00000216605 SMC6Q96SB8 1091 aa9.13□□□□□ -0.95
MTHFD1-201ENST00000216605 PRDM12Q9H4Q4 367 aa9.13□□□□□ -0.95
MTHFD1-201ENST00000216605 USP29Q9HBJ7 922 aa9.13□□□□□ -0.95
MTHFD1-201ENST00000216605 TMEM161AQ9NX61 479 aa9.13□□□□□ -0.95
MTHFD1-201ENST00000216605 MTMR10Q9NXD2 777 aa9.13□□□□□ -0.95
MTHFD1-201ENST00000216605 SLC27A5Q9Y2P5 690 aa9.13□□□□□ -0.95
MTHFD1-201ENST00000216605 BCLAF3A2AJT9 711 aaKnown RBP9.12□□□□□ -0.95
MTHFD1-201ENST00000216605 FAM72CH0Y354 149 aa9.12□□□□□ -0.95
MTHFD1-201ENST00000216605 C2CD2LO14523 706 aa9.12□□□□□ -0.95
MTHFD1-201ENST00000216605 ENPP3O14638 875 aa9.12□□□□□ -0.95
MTHFD1-201ENST00000216605 MSI1O43347 362 aaKnown RBP9.12□□□□□ -0.95
MTHFD1-201ENST00000216605 NDUFB5O43674 189 aa9.12□□□□□ -0.95
MTHFD1-201ENST00000216605 B4GALT3O60512 393 aa9.12□□□□□ -0.95
MTHFD1-201ENST00000216605 S100BP04271 92 aaPredicted RBP9.12□□□□□ -0.95
MTHFD1-201ENST00000216605 TROVE2P10155 538 aaKnown RBP eCLIP9.12□□□□□ -0.95
MTHFD1-201ENST00000216605 RPL34P49207 117 aaKnown RBP9.12□□□□□ -0.95
MTHFD1-201ENST00000216605 SESN2P58004 480 aaPredicted RBP9.12□□□□□ -0.95
MTHFD1-201ENST00000216605 FAM72AQ5TYM5 149 aa9.12□□□□□ -0.95
MTHFD1-201ENST00000216605 RNF43Q68DV7 783 aa9.12□□□□□ -0.95
MTHFD1-201ENST00000216605 FAM72DQ6L9T8 149 aa9.12□□□□□ -0.95
MTHFD1-201ENST00000216605 KIAA1841Q6NSI8 718 aa9.12□□□□□ -0.95
MTHFD1-201ENST00000216605 TAC4Q86UU9 113 aa9.12□□□□□ -0.95
MTHFD1-201ENST00000216605 FAM72BQ86X60 149 aa9.12□□□□□ -0.95
MTHFD1-201ENST00000216605 CYP4X1Q8N118 509 aa9.12□□□□□ -0.95
MTHFD1-201ENST00000216605 COLGALT1Q8NBJ5 622 aa9.12□□□□□ -0.95
MTHFD1-201ENST00000216605 TTC16Q8NEE8 873 aa9.12□□□□□ -0.95
MTHFD1-201ENST00000216605 LINC01599Q8WXQ3 324 aa9.12□□□□□ -0.95
MTHFD1-201ENST00000216605 CELF6Q96J87 481 aaKnown RBP9.12□□□□□ -0.95
MTHFD1-201ENST00000216605 SLC2A13Q96QE2 648 aa9.12□□□□□ -0.95
MTHFD1-201ENST00000216605 HIPK3Q9H422 1215 aa9.12□□□□□ -0.95
MTHFD1-201ENST00000216605 ZC3H7BQ9UGR2 993 aaKnown RBP9.12□□□□□ -0.95
MTHFD1-201ENST00000216605 FARP1Q9Y4F1 1045 aaPredicted RBP9.12□□□□□ -0.95
MTHFD1-201ENST00000216605 GOLGA8RI6L899 631 aa9.12□□□□□ -0.95
MTHFD1-201ENST00000216605 RNF103O00237 685 aa9.12□□□□□ -0.95
MTHFD1-201ENST00000216605 ATP9BO43861 1147 aa9.12□□□□□ -0.95
MTHFD1-201ENST00000216605 NBNO60934 754 aa9.12□□□□□ -0.95
MTHFD1-201ENST00000216605 SOAT2O75908 522 aa9.12□□□□□ -0.95
MTHFD1-201ENST00000216605 CYP11A1P05108 521 aa9.12□□□□□ -0.95
MTHFD1-201ENST00000216605 FYNP06241 537 aa9.12□□□□□ -0.95
MTHFD1-201ENST00000216605 HMBSP08397 361 aa9.12□□□□□ -0.95
MTHFD1-201ENST00000216605 INHBAP08476 426 aa9.12□□□□□ -0.95
MTHFD1-201ENST00000216605 IDO1P14902 403 aa9.12□□□□□ -0.95
MTHFD1-201ENST00000216605 TYMPP19971 482 aa9.12□□□□□ -0.95
MTHFD1-201ENST00000216605 ALDH3A1P30838 453 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms