RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 MUC3BQ9H195 1237 aa12.33□□□□□ -0.44
CHPF2-201ENST00000035307 TBC1D13Q9NVG8 400 aa12.33□□□□□ -0.44
CHPF2-201ENST00000035307 RBM22Q9NW64 420 aaKnown RBP eCLIP12.33□□□□□ -0.44
CHPF2-201ENST00000035307 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.33□□□□□ -0.44
CHPF2-201ENST00000035307 OR12D3Q9UGF7 316 aa12.33□□□□□ -0.44
CHPF2-201ENST00000035307 MFHAS1Q9Y4C4 1052 aa12.33□□□□□ -0.44
CHPF2-201ENST00000035307 PCDHB5Q9Y5E4 795 aa12.33□□□□□ -0.44
CHPF2-201ENST00000035307 hCG_2014768A0A024R1R8 64 aa12.33□□□□□ -0.44
CHPF2-201ENST00000035307 EME2A4GXA9 379 aaPredicted RBP12.33□□□□□ -0.44
CHPF2-201ENST00000035307 E5RI56 91 aa12.33□□□□□ -0.44
CHPF2-201ENST00000035307 PTGESO14684 152 aa12.33□□□□□ -0.44
CHPF2-201ENST00000035307 RALBP11234 206 aa12.33□□□□□ -0.44
CHPF2-201ENST00000035307 EEF1B2P24534 225 aaKnown RBP12.33□□□□□ -0.44
CHPF2-201ENST00000035307 SGO1Q5FBB7 561 aa12.33□□□□□ -0.44
CHPF2-201ENST00000035307 RAP1GAP2Q684P5 730 aa12.33□□□□□ -0.44
CHPF2-201ENST00000035307 LCLAT1Q6UWP7 414 aa12.33□□□□□ -0.44
CHPF2-201ENST00000035307 WDTC1Q8N5D0 677 aa12.33□□□□□ -0.44
CHPF2-201ENST00000035307 TEX9Q8N6V9 391 aa12.33□□□□□ -0.44
CHPF2-201ENST00000035307 PPHLN1Q8NEY8 458 aaKnown RBP12.33□□□□□ -0.44
CHPF2-201ENST00000035307 CPT1BQ92523 772 aa12.33□□□□□ -0.44
CHPF2-201ENST00000035307 RUVBL2Q9Y230 463 aaKnown RBP12.33□□□□□ -0.44
CHPF2-201ENST00000035307 STYXL1Q9Y6J8 313 aa12.33□□□□□ -0.44
CHPF2-201ENST00000035307 PHIPQ8WWQ0 1821 aa12.33□□□□□ -0.44
CHPF2-201ENST00000035307 DCXO43602 365 aa12.33□□□□□ -0.44
CHPF2-201ENST00000035307 SUPT7LO94864 414 aa12.33□□□□□ -0.44
CHPF2-201ENST00000035307 CYP1A1P04798 512 aaPredicted RBP12.33□□□□□ -0.44
CHPF2-201ENST00000035307 CCND1P24385 295 aa12.33□□□□□ -0.44
CHPF2-201ENST00000035307 TUBP50607 506 aa12.33□□□□□ -0.44
CHPF2-201ENST00000035307 RAB27AP51159 221 aa12.33□□□□□ -0.44
CHPF2-201ENST00000035307 BST1Q10588 318 aa12.33□□□□□ -0.44
CHPF2-201ENST00000035307 MPP3Q13368 585 aa12.33□□□□□ -0.44
CHPF2-201ENST00000035307 PDE1CQ14123 709 aaPredicted RBP12.33□□□□□ -0.44
CHPF2-201ENST00000035307 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.33□□□□□ -0.44
CHPF2-201ENST00000035307 TMEM154Q6P9G4 183 aa12.33□□□□□ -0.44
CHPF2-201ENST00000035307 UNC5BQ8IZJ1 945 aa12.33□□□□□ -0.44
CHPF2-201ENST00000035307 FITM2Q8N6M3 262 aa12.33□□□□□ -0.44
CHPF2-201ENST00000035307 EGFL8Q99944 293 aa12.33□□□□□ -0.44
CHPF2-201ENST00000035307 PIF1Q9H611 641 aa12.33□□□□□ -0.44
CHPF2-201ENST00000035307 NRDE2Q9H7Z3 1164 aa12.33□□□□□ -0.44
CHPF2-201ENST00000035307 CAB39LQ9H9S4 337 aa12.33□□□□□ -0.44
CHPF2-201ENST00000035307 GIT1Q9Y2X7 761 aa12.33□□□□□ -0.44
CHPF2-201ENST00000035307 TYW5A2RUC4 315 aaKnown RBP12.32□□□□□ -0.44
CHPF2-201ENST00000035307 LRRC37AA6NMS7 1700 aa12.32□□□□□ -0.44
CHPF2-201ENST00000035307 ARVCFO00192 962 aa12.32□□□□□ -0.44
CHPF2-201ENST00000035307 NRP1O14786 923 aa12.32□□□□□ -0.44
CHPF2-201ENST00000035307 CABYRO75952 493 aa12.32□□□□□ -0.44
CHPF2-201ENST00000035307 SERPINB9P50453 376 aa12.32□□□□□ -0.44
CHPF2-201ENST00000035307 PSMD5Q16401 504 aa12.32□□□□□ -0.44
CHPF2-201ENST00000035307 OTOAQ7RTW8 1153 aa12.32□□□□□ -0.44
CHPF2-201ENST00000035307 ALYREFQ86V81 257 aaKnown RBP12.32□□□□□ -0.44
CHPF2-201ENST00000035307 C3orf58Q8NDZ4 430 aa12.32□□□□□ -0.44
CHPF2-201ENST00000035307 POPDC2Q9HBU9 364 aa12.32□□□□□ -0.44
CHPF2-201ENST00000035307 MID2Q9UJV3 735 aa12.32□□□□□ -0.44
CHPF2-201ENST00000035307 CBX4O00257 560 aa12.32□□□□□ -0.44
CHPF2-201ENST00000035307 DNAJC6O75061 913 aa12.32□□□□□ -0.44
CHPF2-201ENST00000035307 CSF2RAP15509 400 aa12.32□□□□□ -0.44
CHPF2-201ENST00000035307 KLRC2P26717 231 aa12.32□□□□□ -0.44
CHPF2-201ENST00000035307 HADHAP40939 763 aa12.32□□□□□ -0.44
CHPF2-201ENST00000035307 GRIA1P42261 906 aa12.32□□□□□ -0.44
CHPF2-201ENST00000035307 TAF10Q12962 218 aa12.32□□□□□ -0.44
CHPF2-201ENST00000035307 OMDQ99983 421 aa12.32□□□□□ -0.44
CHPF2-201ENST00000035307 DUSP16Q9BY84 665 aa12.32□□□□□ -0.44
CHPF2-201ENST00000035307 ZNF831Q5JPB2 1677 aa12.32□□□□□ -0.44
CHPF2-201ENST00000035307 UGT1A9O60656 530 aa12.32□□□□□ -0.44
CHPF2-201ENST00000035307 SHOX2O60902 331 aaPredicted RBP12.32□□□□□ -0.44
CHPF2-201ENST00000035307 SPAG6O75602 509 aa12.32□□□□□ -0.44
CHPF2-201ENST00000035307 TMEM63AO94886 807 aa12.32□□□□□ -0.44
CHPF2-201ENST00000035307 FSBPO95073 299 aa12.32□□□□□ -0.44
CHPF2-201ENST00000035307 ATP6V1B1P15313 513 aa12.32□□□□□ -0.44
CHPF2-201ENST00000035307 XPAP23025 273 aaPredicted RBP12.32□□□□□ -0.44
CHPF2-201ENST00000035307 YWHAQP27348 245 aa12.32□□□□□ -0.44
CHPF2-201ENST00000035307 ANKRD20A2Q5SQ80 823 aa12.32□□□□□ -0.44
CHPF2-201ENST00000035307 ANKRD20A1Q5TYW2 823 aa12.32□□□□□ -0.44
CHPF2-201ENST00000035307 RFWD3Q6PCD5 774 aa12.32□□□□□ -0.44
CHPF2-201ENST00000035307 SERINC5Q86VE9 423 aa12.32□□□□□ -0.44
CHPF2-201ENST00000035307 C7orf61Q8IZ16 206 aa12.32□□□□□ -0.44
CHPF2-201ENST00000035307 TTC9BQ8N6N2 239 aa12.32□□□□□ -0.44
CHPF2-201ENST00000035307 ATXN2LQ8WWM7 1075 aaKnown RBP12.32□□□□□ -0.44
CHPF2-201ENST00000035307 SCG3Q8WXD2 468 aaKnown RBP12.32□□□□□ -0.44
CHPF2-201ENST00000035307 GCNAQ96QF7 691 aa12.32□□□□□ -0.44
CHPF2-201ENST00000035307 TSC22D3Q99576 134 aa12.32□□□□□ -0.44
CHPF2-201ENST00000035307 UGT1A7Q9HAW7 530 aa12.32□□□□□ -0.44
CHPF2-201ENST00000035307 UGT1A10Q9HAW8 530 aa12.32□□□□□ -0.44
CHPF2-201ENST00000035307 UGT1A8Q9HAW9 530 aa12.32□□□□□ -0.44
CHPF2-201ENST00000035307 PCDH18Q9HCL0 1135 aa12.32□□□□□ -0.44
CHPF2-201ENST00000035307 BCAP29Q9UHQ4 241 aa12.32□□□□□ -0.44
CHPF2-201ENST00000035307 RNF103-CHMP3A0A140T963 221 aa12.31□□□□□ -0.44
CHPF2-201ENST00000035307 A0A1W2PQH9 124 aa12.31□□□□□ -0.44
CHPF2-201ENST00000035307 CASQ2O14958 399 aaPredicted RBP12.31□□□□□ -0.44
CHPF2-201ENST00000035307 SNX2O60749 519 aa12.31□□□□□ -0.44
CHPF2-201ENST00000035307 NOL3O60936 208 aaKnown RBP12.31□□□□□ -0.44
CHPF2-201ENST00000035307 CPA3P15088 417 aa12.31□□□□□ -0.44
CHPF2-201ENST00000035307 POM121L1PQ3SYA9 428 aa12.31□□□□□ -0.44
CHPF2-201ENST00000035307 VARS2Q5ST30 1063 aaKnown RBP12.31□□□□□ -0.44
CHPF2-201ENST00000035307 ANGPTL8Q6UXH0 198 aa12.31□□□□□ -0.44
CHPF2-201ENST00000035307 FRA10AC1Q70Z53 315 aa12.31□□□□□ -0.44
CHPF2-201ENST00000035307 SERPINI1Q99574 410 aa12.31□□□□□ -0.44
CHPF2-201ENST00000035307 TMEM59LQ9UK28 342 aa12.31□□□□□ -0.44
CHPF2-201ENST00000035307 A0A096LPK6 155 aa12.31□□□□□ -0.44
CHPF2-201ENST00000035307 GNGT2O14610 69 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms