RNA–Protein interactions for RNA: ENSMUST00000108593.7

Ctdnep1-201, Transcript of CTD nuclear envelope phosphatase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctdnep1, Length 1,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1-201ENSMUST00000108593 Emilin3P59900 758 aa31.24■■■□□ 2.59
Ctdnep1-201ENSMUST00000108593 Ccndbp1Q3TVC7 356 aa31.24■■■□□ 2.59
Ctdnep1-201ENSMUST00000108593 Mrgprx2Q3UG50 352 aa31.24■■■□□ 2.59
Ctdnep1-201ENSMUST00000108593 Rnf215Q5SPX3 379 aa31.24■■■□□ 2.59
Ctdnep1-201ENSMUST00000108593 Papd7Q6PB75 542 aa31.24■■■□□ 2.59
Ctdnep1-201ENSMUST00000108593 Elp6Q8BK75 266 aa31.24■■■□□ 2.59
Ctdnep1-201ENSMUST00000108593 Clec4a3Q8JZX6 237 aa31.24■■■□□ 2.59
Ctdnep1-201ENSMUST00000108593 Appl1Q8K3H0 707 aa31.24■■■□□ 2.59
Ctdnep1-201ENSMUST00000108593 Bex2Q9WTZ8 129 aa31.24■■■□□ 2.59
Ctdnep1-201ENSMUST00000108593 Cfap221A9Q751 836 aa31.24■■■□□ 2.59
Ctdnep1-201ENSMUST00000108593 Fgf15O35622 218 aa31.24■■■□□ 2.59
Ctdnep1-201ENSMUST00000108593 Pde8aO88502 823 aa31.24■■■□□ 2.59
Ctdnep1-201ENSMUST00000108593 Mucl2P02815 138 aa31.24■■■□□ 2.59
Ctdnep1-201ENSMUST00000108593 Il12bP43432 335 aa31.24■■■□□ 2.59
Ctdnep1-201ENSMUST00000108593 Grin2cQ01098 1239 aa31.24■■■□□ 2.59
Ctdnep1-201ENSMUST00000108593 Sept10Q8C650 452 aa31.24■■■□□ 2.59
Ctdnep1-201ENSMUST00000108593 Vmn1r18Q8R2C8 299 aa31.24■■■□□ 2.59
Ctdnep1-201ENSMUST00000108593 McmbpQ8R3C0 642 aa31.24■■■□□ 2.59
Ctdnep1-201ENSMUST00000108593 Pcdhb11Q91UZ8 797 aa31.24■■■□□ 2.59
Ctdnep1-201ENSMUST00000108593 Atpaf2Q91YY4 289 aa31.24■■■□□ 2.59
Ctdnep1-201ENSMUST00000108593 Gprc5bQ923Z0 410 aa31.24■■■□□ 2.59
Ctdnep1-201ENSMUST00000108593 Atp8b4A2ANX3 1194 aa31.23■■■□□ 2.59
Ctdnep1-201ENSMUST00000108593 Fbrsl1E9Q9T0 1031 aa31.23■■■□□ 2.59
Ctdnep1-201ENSMUST00000108593 Gsg1l2M0QWL6 290 aa31.23■■■□□ 2.59
Ctdnep1-201ENSMUST00000108593 Dpysl2O08553 572 aaKnown RBP31.23■■■□□ 2.59
Ctdnep1-201ENSMUST00000108593 Pias3O54714 628 aa31.23■■■□□ 2.59
Ctdnep1-201ENSMUST00000108593 C4bpaP08607 469 aa31.23■■■□□ 2.59
Ctdnep1-201ENSMUST00000108593 Marcksl1P28667 200 aa31.23■■■□□ 2.59
Ctdnep1-201ENSMUST00000108593 Hsd17b2P51658 381 aa31.23■■■□□ 2.59
Ctdnep1-201ENSMUST00000108593 Trim43aQ3TL54 445 aa31.23■■■□□ 2.59
Ctdnep1-201ENSMUST00000108593 Phactr4Q501J7 694 aa31.23■■■□□ 2.59
Ctdnep1-201ENSMUST00000108593 Lrsam1Q80ZI6 727 aa31.23■■■□□ 2.59
Ctdnep1-201ENSMUST00000108593 Q8BGD0 127 aa31.23■■■□□ 2.59
Ctdnep1-201ENSMUST00000108593 Cox14Q8BH51 57 aa31.23■■■□□ 2.59
Ctdnep1-201ENSMUST00000108593 Zfp595Q8BIN6 625 aa31.23■■■□□ 2.59
Ctdnep1-201ENSMUST00000108593 Stx16Q8BVI5 326 aa31.23■■■□□ 2.59
Ctdnep1-201ENSMUST00000108593 Cfap36Q8C6E0 343 aa31.23■■■□□ 2.59
Ctdnep1-201ENSMUST00000108593 C130026I21RikQ8C898 291 aa31.23■■■□□ 2.59
Ctdnep1-201ENSMUST00000108593 Znf426Q8R1D1 550 aa31.23■■■□□ 2.59
Ctdnep1-201ENSMUST00000108593 Cdkn2aipnlQ9D211 116 aaKnown RBP31.23■■■□□ 2.59
Ctdnep1-201ENSMUST00000108593 Bace2Q9JL18 514 aa31.23■■■□□ 2.59
Ctdnep1-201ENSMUST00000108593 Plod1Q9R0E2 728 aa31.23■■■□□ 2.59
Ctdnep1-201ENSMUST00000108593 Map3k6Q9WTR2 1291 aa31.23■■■□□ 2.59
Ctdnep1-201ENSMUST00000108593 RargP18911 458 aaKnown RBP31.22■■■□□ 2.59
Ctdnep1-201ENSMUST00000108593 Ddr1Q03146 911 aa31.22■■■□□ 2.59
Ctdnep1-201ENSMUST00000108593 Znf750Q8BH05 703 aa31.22■■■□□ 2.59
Ctdnep1-201ENSMUST00000108593 Fra10ac1Q8BP78 315 aa31.22■■■□□ 2.59
Ctdnep1-201ENSMUST00000108593 Apol9aQ8VDU3 310 aa31.22■■■□□ 2.59
Ctdnep1-201ENSMUST00000108593 Ddx1Q91VR5 740 aaKnown RBP31.22■■■□□ 2.59
Ctdnep1-201ENSMUST00000108593 Ubxn6Q99PL6 442 aa31.22■■■□□ 2.59
Ctdnep1-201ENSMUST00000108593 Gm7275E9Q1B3 247 aa31.21■■■□□ 2.59
Ctdnep1-201ENSMUST00000108593 Pitx1P70314 315 aa31.21■■■□□ 2.59
Ctdnep1-201ENSMUST00000108593 Itga4Q00651 1039 aa31.21■■■□□ 2.59
Ctdnep1-201ENSMUST00000108593 Bcl2a1cQ0P538 128 aa31.21■■■□□ 2.59
Ctdnep1-201ENSMUST00000108593 Ube2zQ3UE37 356 aa31.21■■■□□ 2.59
Ctdnep1-201ENSMUST00000108593 Trmt10cQ3UFY8 414 aaKnown RBP31.21■■■□□ 2.59
Ctdnep1-201ENSMUST00000108593 Taar7aQ5QD12 358 aa31.21■■■□□ 2.59
Ctdnep1-201ENSMUST00000108593 2700097O09RikQ6PGK3 301 aa31.21■■■□□ 2.59
Ctdnep1-201ENSMUST00000108593 OafQ8QZR4 282 aa31.21■■■□□ 2.59
Ctdnep1-201ENSMUST00000108593 Thumpd2Q9CZB3 528 aa31.21■■■□□ 2.59
Ctdnep1-201ENSMUST00000108593 PdiltQ9DAN1 588 aa31.21■■■□□ 2.59
Ctdnep1-201ENSMUST00000108593 NfkbizQ9EST8 728 aa31.21■■■□□ 2.59
Ctdnep1-201ENSMUST00000108593 Ror1Q9Z139 937 aa31.21■■■□□ 2.59
Ctdnep1-201ENSMUST00000108593 Myo10F8VQB6 2062 aa31.21■■■□□ 2.59
Ctdnep1-201ENSMUST00000108593 Gm13283A0A087WPG5 182 aa31.2■■■□□ 2.59
Ctdnep1-201ENSMUST00000108593 Ccnyl1D3YUJ3 367 aa31.2■■■□□ 2.59
Ctdnep1-201ENSMUST00000108593 Gprin2D3Z1D7 455 aa31.2■■■□□ 2.59
Ctdnep1-201ENSMUST00000108593 Tcp1P11983 556 aaKnown RBP31.2■■■□□ 2.59
Ctdnep1-201ENSMUST00000108593 Lmnb2P21619 596 aaKnown RBP31.2■■■□□ 2.59
Ctdnep1-201ENSMUST00000108593 PorP37040 678 aa31.2■■■□□ 2.59
Ctdnep1-201ENSMUST00000108593 G2e3Q5RJY2 716 aa31.2■■■□□ 2.59
Ctdnep1-201ENSMUST00000108593 RhocQ62159 193 aa31.2■■■□□ 2.59
Ctdnep1-201ENSMUST00000108593 Fnip2Q80TD3 1108 aa31.2■■■□□ 2.59
Ctdnep1-201ENSMUST00000108593 Ppm1kQ8BXN7 372 aa31.2■■■□□ 2.59
Ctdnep1-201ENSMUST00000108593 Creld2Q9CYA0 350 aa31.2■■■□□ 2.59
Ctdnep1-201ENSMUST00000108593 Fam114a1Q9D281 569 aa31.2■■■□□ 2.59
Ctdnep1-201ENSMUST00000108593 Mfap5Q9QZJ6 164 aa31.2■■■□□ 2.59
Ctdnep1-201ENSMUST00000108593 Igkv10-95A0A0G2JFY3 115 aa31.2■■■□□ 2.58
Ctdnep1-201ENSMUST00000108593 Gm16430A6X8J1 155 aa31.2■■■□□ 2.58
Ctdnep1-201ENSMUST00000108593 Gm5689F6Y2A6 97 aa31.2■■■□□ 2.58
Ctdnep1-201ENSMUST00000108593 Fcgr1P26151 404 aa31.2■■■□□ 2.58
Ctdnep1-201ENSMUST00000108593 Htr2cP34968 459 aa31.2■■■□□ 2.58
Ctdnep1-201ENSMUST00000108593 Ndst2P52850 883 aa31.2■■■□□ 2.58
Ctdnep1-201ENSMUST00000108593 Pld5Q3UNN8 536 aa31.2■■■□□ 2.58
Ctdnep1-201ENSMUST00000108593 Fbxw2Q60584 422 aa31.2■■■□□ 2.58
Ctdnep1-201ENSMUST00000108593 Vmn2r43Q80Z08 845 aa31.2■■■□□ 2.58
Ctdnep1-201ENSMUST00000108593 Atg14Q8CDJ3 492 aa31.2■■■□□ 2.58
Ctdnep1-201ENSMUST00000108593 Sash3Q8K352 380 aa31.2■■■□□ 2.58
Ctdnep1-201ENSMUST00000108593 Tram1l1Q8QZR0 363 aa31.2■■■□□ 2.58
Ctdnep1-201ENSMUST00000108593 AslQ91YI0 464 aa31.2■■■□□ 2.58
Ctdnep1-201ENSMUST00000108593 Sar1bQ9CQC9 198 aa31.2■■■□□ 2.58
Ctdnep1-201ENSMUST00000108593 Efhc2Q9D485 750 aa31.2■■■□□ 2.58
Ctdnep1-201ENSMUST00000108593 CtsrQ9JIA9 334 aa31.2■■■□□ 2.58
Ctdnep1-201ENSMUST00000108593 Dnajb9Q9QYI6 222 aa31.2■■■□□ 2.58
Ctdnep1-201ENSMUST00000108593 Nphs1Q9QZS7 1256 aa31.2■■■□□ 2.58
Ctdnep1-201ENSMUST00000108593 HephQ9Z0Z4 1157 aa31.2■■■□□ 2.58
Ctdnep1-201ENSMUST00000108593 Gm5538W4VSP6 401 aa31.2■■■□□ 2.58
Ctdnep1-201ENSMUST00000108593 TectaO08523 2155 aa31.19■■■□□ 2.58
Ctdnep1-201ENSMUST00000108593 Zc3h12bG3X9I7 835 aa31.19■■■□□ 2.58
Ctdnep1-201ENSMUST00000108593 LgmnO89017 435 aa31.19■■■□□ 2.58
Retrieved 100 of 22,080 RNA–protein pairs in 34.8 ms