RNA–Protein interactions for RNA: ENSMUST00000080860.12

Ccdc28a-202, Transcript of Coiled-coil domain-containing 28A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28a, Length 1,190 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-202ENSMUST00000080860 Q3V0E1 1183 aa12.48□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Ephx3Q3V1F8 367 aa12.48□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Defb28Q3V2L0 89 aa12.48□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Znf728Q6P5C7 752 aa12.48□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 MroQ7TNB4 248 aa12.48□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Nrde2Q80XC6 1172 aa12.48□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Hmgxb4Q80Y32 594 aaKnown RBP12.48□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Nup93Q8BJ71 819 aaKnown RBP12.48□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Ptk7Q8BKG3 1062 aa12.48□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Slitrk6Q8C110 840 aa12.48□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Fam149aQ8CFV2 787 aa12.48□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Aldh4a1Q8CHT0 562 aa12.48□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Unc5bQ8K1S3 945 aa12.48□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Appl1Q8K3H0 707 aa12.48□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 TmieQ8K467 153 aa12.48□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Fam161aQ8QZV6 448 aa12.48□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Asz1Q8VD46 475 aa12.48□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Epsti1Q8VDI1 314 aa12.48□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Rprd1aQ8VDS4 312 aa12.48□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Olfr697Q8VFM4 317 aa12.48□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Efhc2Q9D485 750 aa12.48□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Riok3Q9DBU3 519 aaKnown RBP12.48□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Itpr1P11881 2749 aa12.48□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Zfp811A0A0J9YU71 552 aa12.47□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Usp51B1AY15 661 aa12.47□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Brpf3B2KF05 1204 aaKnown RBP12.47□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Arhgap42B2RQE8 841 aa12.47□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Gm3127E9Q9P5 263 aa12.47□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Zfp850J3QPC5 689 aa12.47□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Gm3453K7N724 263 aa12.47□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Gm3488M0QW81 238 aa12.47□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 PurbO35295 324 aaKnown RBP12.47□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Wsb2O54929 404 aa12.47□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Slc22a2O70577 553 aa12.47□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Adcy1O88444 1118 aa12.47□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 CtslP06797 334 aa12.47□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Pdia4P08003 638 aaKnown RBP12.47□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Ncam1P13595 1115 aa12.47□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Slc7a2P18581 657 aa12.47□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Stmn1P54227 149 aaKnown RBP12.47□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Pitx1P70314 315 aa12.47□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Gjb6P70689 261 aa12.47□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Zscan2Q07230 614 aa12.47□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Emc10Q3TAS6 258 aa12.47□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Zyg11bQ3UFS0 744 aa12.47□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Erich4Q3UNU4 136 aa12.47□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Gpr149Q3UVY1 732 aa12.47□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Kif11Q6P9P6 1052 aa12.47□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Olfr20Q7TRX9 314 aa12.47□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 March4Q80TE3 409 aa12.47□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Them6Q80ZW2 207 aa12.47□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Frmd4aQ8BIE6 1020 aa12.47□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Pnma3Q8JZW8 466 aa12.47□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 D630039A03RikQ8K0M7 236 aa12.47□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Nop14Q8R3N1 860 aaKnown RBP12.47□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Cadm4Q8R464 388 aa12.47□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Cpa5Q8R4H4 436 aa12.47□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Tmem168Q91VX9 697 aa12.47□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Pcdhb1Q91Y08 818 aa12.47□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Pdxdc1Q99K01 787 aaKnown RBP12.47□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Slc25a11Q9CR62 314 aaKnown RBP12.47□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Mfap3lQ9D3X9 409 aa12.47□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Ankrd7Q9D504 279 aa12.47□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 NvlQ9DBY8 855 aaKnown RBP12.47□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Tor1bQ9ER41 336 aa12.47□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Strn3Q9ERG2 796 aa12.47□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Ajap1A2ALI5 412 aa12.46□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Zbtb34A2ATY4 518 aa12.46□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Zfp839E9PUU5 921 aa12.46□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Tspyl1O88852 379 aa12.46□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Ltb4rO88855 351 aa12.46□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Slc1a2P43006 572 aa12.46□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Limk1P53668 647 aa12.46□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Fgf14P70379 247 aa12.46□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Prss48Q14B25 312 aa12.46□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Sap25Q1EHW4 186 aa12.46□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Pak6Q3ULB5 682 aa12.46□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Phactr4Q501J7 694 aa12.46□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Gm14851Q5ERJ0 116 aa12.46□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Gm11492Q5ND19 536 aa12.46□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Ptpn21Q62136 1176 aa12.46□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Cdh24Q6PFX6 781 aa12.46□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Cspg5Q71M36 566 aa12.46□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 H2-M10.2Q85ZW9 329 aa12.46□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Tmem74Q8BQU7 305 aa12.46□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Dclk3Q8BWQ5 790 aa12.46□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Parp12Q8BZ20 711 aaKnown RBP12.46□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Ddx18Q8K363 660 aaKnown RBP12.46□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Eif3cQ8R1B4 911 aaKnown RBP12.46□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Ccdc65Q8VHI7 493 aa12.46□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Ugp2Q91ZJ5 508 aa12.46□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Rev1Q920Q2 1249 aa12.46□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Pex6Q99LC9 981 aa12.46□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 MtapQ9CQ65 283 aa12.46□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Lsm7Q9CQQ8 103 aaKnown RBP12.46□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Tpd52l2Q9CYZ2 220 aaKnown RBP12.46□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Senp8Q9D2Z4 221 aa12.46□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Syap1Q9D5V6 365 aa12.46□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Ush1cQ9ES64 910 aa12.46□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 EefsecQ9JHW4 583 aa12.46□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 41.2 ms