RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 TERF2IPQ9NYB0 399 aa21.56■■□□□ 1.04
PHGDH-223ENST00000641597 NLRP1Q9C000 1473 aa21.55■■□□□ 1.04
PHGDH-223ENST00000641597 MAPK8IP3Q9UPT6 1336 aa21.55■■□□□ 1.04
PHGDH-223ENST00000641597 ADGRB2O60241 1585 aa21.55■■□□□ 1.04
PHGDH-223ENST00000641597 TRIM27P14373 513 aa21.55■■□□□ 1.04
PHGDH-223ENST00000641597 MVPQ14764 893 aaKnown RBP21.55■■□□□ 1.04
PHGDH-223ENST00000641597 FTSJ3Q8IY81 847 aaKnown RBP21.55■■□□□ 1.04
PHGDH-223ENST00000641597 FAM69CQ0P6D2 419 aa21.54■■□□□ 1.04
PHGDH-223ENST00000641597 FRAT2O75474 233 aaPredicted RBP21.54■■□□□ 1.04
PHGDH-223ENST00000641597 ZKSCAN2Q63HK3 967 aa21.54■■□□□ 1.04
PHGDH-223ENST00000641597 NCKAP5LQ9HCH0 1330 aa21.54■■□□□ 1.04
PHGDH-223ENST00000641597 ZFYVE9O95405 1425 aa21.54■■□□□ 1.04
PHGDH-223ENST00000641597 DZIP1LQ8IYY4 767 aaKnown RBP21.53■■□□□ 1.04
PHGDH-223ENST00000641597 THUMPD2Q9BTF0 503 aaKnown RBP21.53■■□□□ 1.04
PHGDH-223ENST00000641597 ZRANB1Q9UGI0 708 aa21.53■■□□□ 1.04
PHGDH-223ENST00000641597 IL27Q8NEV9 243 aa21.52■■□□□ 1.04
PHGDH-223ENST00000641597 USP35Q9P2H5 1018 aa21.52■■□□□ 1.04
PHGDH-223ENST00000641597 HMOX1P09601 288 aa21.52■■□□□ 1.04
PHGDH-223ENST00000641597 PMFBP1Q8TBY8 1022 aa21.52■■□□□ 1.04
PHGDH-223ENST00000641597 NOB1Q9ULX3 412 aaKnown RBP21.52■■□□□ 1.04
PHGDH-223ENST00000641597 DIAPH1O60610 1272 aaKnown RBP21.51■■□□□ 1.03
PHGDH-223ENST00000641597 ITPRIPQ8IWB1 547 aa21.51■■□□□ 1.03
PHGDH-223ENST00000641597 ALKQ9UM73 1620 aa21.51■■□□□ 1.03
PHGDH-223ENST00000641597 ATAD2Q6PL18 1390 aa21.51■■□□□ 1.03
PHGDH-223ENST00000641597 TSPOAP1O95153 1857 aa21.5■■□□□ 1.03
PHGDH-223ENST00000641597 HDGFL2Q7Z4V5 671 aaPredicted RBP21.49■■□□□ 1.03
PHGDH-223ENST00000641597 PHACTR3Q96KR7 559 aa21.49■■□□□ 1.03
PHGDH-223ENST00000641597 VIRMAQ69YN4 1812 aaKnown RBP21.49■■□□□ 1.03
PHGDH-223ENST00000641597 PRKAR2BP31323 418 aa21.48■■□□□ 1.03
PHGDH-223ENST00000641597 SLKQ9H2G2 1235 aaPredicted RBP21.48■■□□□ 1.03
PHGDH-223ENST00000641597 ARHGEF40Q8TER5 1519 aa21.48■■□□□ 1.03
PHGDH-223ENST00000641597 TMEM57Q8N5G2 664 aa21.47■■□□□ 1.03
PHGDH-223ENST00000641597 RWDD1Q9H446 243 aaPredicted RBP21.47■■□□□ 1.03
PHGDH-223ENST00000641597 EMILIN1Q9Y6C2 1016 aa21.47■■□□□ 1.03
PHGDH-223ENST00000641597 POLKQ9UBT6 870 aa21.47■■□□□ 1.03
PHGDH-223ENST00000641597 RTN4Q9NQC3 1192 aaKnown RBP21.46■■□□□ 1.03
PHGDH-223ENST00000641597 ELL2O00472 640 aaPredicted RBP21.45■■□□□ 1.02
PHGDH-223ENST00000641597 ATF7IPQ6VMQ6 1270 aa21.45■■□□□ 1.02
PHGDH-223ENST00000641597 NME9Q86XW9 330 aa21.45■■□□□ 1.02
PHGDH-223ENST00000641597 TXNDC2Q86VQ3 553 aa21.43■■□□□ 1.02
PHGDH-223ENST00000641597 SPRYD3Q8NCJ5 442 aa21.43■■□□□ 1.02
PHGDH-223ENST00000641597 LRRC7Q96NW7 1537 aa21.42■■□□□ 1.02
PHGDH-223ENST00000641597 RSPH6AQ9H0K4 717 aa21.42■■□□□ 1.02
PHGDH-223ENST00000641597 PNPLA6Q8IY17 1366 aa21.42■■□□□ 1.02
PHGDH-223ENST00000641597 GSE1Q14687 1217 aa21.41■■□□□ 1.02
PHGDH-223ENST00000641597 TSPYL6Q8N831 410 aa21.41■■□□□ 1.02
PHGDH-223ENST00000641597 CLTCQ00610 1675 aaKnown RBP21.41■■□□□ 1.02
PHGDH-223ENST00000641597 ANKRD26Q9UPS8 1709 aa21.41■■□□□ 1.02
PHGDH-223ENST00000641597 RRS1Q15050 365 aaKnown RBP21.4■■□□□ 1.02
PHGDH-223ENST00000641597 A2ML1A8K2U0 1454 aa21.39■■□□□ 1.02
PHGDH-223ENST00000641597 METP08581 1390 aa21.39■■□□□ 1.01
PHGDH-223ENST00000641597 C1orf115Q9H7X2 142 aa21.39■■□□□ 1.01
PHGDH-223ENST00000641597 BRPF3Q9ULD4 1205 aa21.39■■□□□ 1.01
PHGDH-223ENST00000641597 RIMS2Q9UQ26 1411 aa21.38■■□□□ 1.01
PHGDH-223ENST00000641597 TBC1D32Q96NH3 1257 aa21.38■■□□□ 1.01
PHGDH-223ENST00000641597 KIF20BQ96Q89 1820 aa21.37■■□□□ 1.01
PHGDH-223ENST00000641597 NUTM2FA1L443 756 aa21.37■■□□□ 1.01
PHGDH-223ENST00000641597 MED14O60244 1454 aa21.37■■□□□ 1.01
PHGDH-223ENST00000641597 MAP2P11137 1827 aaKnown RBP21.37■■□□□ 1.01
PHGDH-223ENST00000641597 FAM83GA6ND36 823 aa21.37■■□□□ 1.01
PHGDH-223ENST00000641597 FCHSD2O94868 740 aa21.37■■□□□ 1.01
PHGDH-223ENST00000641597 MFAP1P55081 439 aaKnown RBP21.37■■□□□ 1.01
PHGDH-223ENST00000641597 NCBP3Q53F19 620 aaKnown RBP21.37■■□□□ 1.01
PHGDH-223ENST00000641597 DDX19BQ9UMR2 479 aa21.37■■□□□ 1.01
PHGDH-223ENST00000641597 ZBTB40Q9NUA8 1239 aa21.36■■□□□ 1.01
PHGDH-223ENST00000641597 AAMPQ13685 434 aa21.36■■□□□ 1.01
PHGDH-223ENST00000641597 DCTN1Q14203 1278 aa21.36■■□□□ 1.01
PHGDH-223ENST00000641597 TBC1D2Q9BYX2 928 aa21.36■■□□□ 1.01
PHGDH-223ENST00000641597 CT47B1P0C2W7 299 aaPredicted RBP21.35■■□□□ 1.01
PHGDH-223ENST00000641597 LNPKQ9C0E8 428 aa21.34■■□□□ 1.01
PHGDH-223ENST00000641597 FAM135BQ49AJ0 1406 aa21.34■■□□□ 1.01
PHGDH-223ENST00000641597 PPIP5K1Q6PFW1 1433 aa21.34■■□□□ 1.01
PHGDH-223ENST00000641597 IL16Q14005 1332 aa21.34■■□□□ 1.01
PHGDH-223ENST00000641597 WASLO00401 505 aaPredicted RBP21.33■■□□□ 1.01
PHGDH-223ENST00000641597 HDAC1Q13547 482 aaPredicted RBP21.33■■□□□ 1
PHGDH-223ENST00000641597 IL13P35225 146 aa21.32■■□□□ 1
PHGDH-223ENST00000641597 UPF2Q9HAU5 1272 aaKnown RBP21.32■■□□□ 1
PHGDH-223ENST00000641597 NUDT16Q96DE0 195 aaKnown RBP21.31■■□□□ 1
PHGDH-223ENST00000641597 RIMBP3CA6NJZ7 1639 aa21.31■■□□□ 1
PHGDH-223ENST00000641597 RIMBP3BA6NNM3 1639 aa21.31■■□□□ 1
PHGDH-223ENST00000641597 RIMBP3Q9UFD9 1639 aa21.31■■□□□ 1
PHGDH-223ENST00000641597 NFE2L2Q16236 605 aa21.31■■□□□ 1
PHGDH-223ENST00000641597 VAMP4O75379 141 aa21.3■■□□□ 1
PHGDH-223ENST00000641597 SMC5Q8IY18 1101 aa21.3■■□□□ 1
PHGDH-223ENST00000641597 MBIPQ9NS73 344 aa21.3■■□□□ 1
PHGDH-223ENST00000641597 DIP2BQ9P265 1576 aa21.3■■□□□ 1
PHGDH-223ENST00000641597 SETD1AO15047 1707 aaKnown RBP21.3■■□□□ 1
PHGDH-223ENST00000641597 CPS1P31327 1500 aa21.29■■□□□ 1
PHGDH-223ENST00000641597 BECN1Q14457 450 aa21.29■■□□□ 1
PHGDH-223ENST00000641597 ANTXR1Q9H6X2 564 aa21.29■■□□□ 1
PHGDH-223ENST00000641597 KIF16BQ96L93 1317 aa21.29■■□□□ 1
PHGDH-223ENST00000641597 SOX12O15370 315 aa21.28■■□□□ 1
PHGDH-223ENST00000641597 AEBP1Q8IUX7 1158 aa21.28■■□□□ 1
PHGDH-223ENST00000641597 C8orf58Q8NAV2 365 aa21.28■■□□□ 1
PHGDH-223ENST00000641597 PRR36Q9H6K5 1346 aa21.27■■□□□ 1
PHGDH-223ENST00000641597 KRT24Q2M2I5 525 aa21.27■■□□□ 1
PHGDH-223ENST00000641597 ATP7BP35670 1465 aa21.27■■□□□ 1
PHGDH-223ENST00000641597 IPO8O15397 1037 aaKnown RBP21.27■□□□□ 0.99
PHGDH-223ENST00000641597 C22orf23Q9BZE7 217 aa21.27■□□□□ 0.99
PHGDH-223ENST00000641597 NRXN3Q9Y4C0 1643 aa21.27■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms