RNA–Protein interactions for RNA: ENST00000640958.1

SP3-208, Transcript of Sp3 transcription factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SP3, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP3-208ENST00000640958 DIP2AQ14689 1571 aa26.73■■□□□ 1.87
SP3-208ENST00000640958 NCBP3Q53F19 620 aaKnown RBP26.73■■□□□ 1.87
SP3-208ENST00000640958 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.73■■□□□ 1.87
SP3-208ENST00000640958 RRP7AQ9Y3A4 280 aaKnown RBP26.72■■□□□ 1.87
SP3-208ENST00000640958 MAP2P11137 1827 aaKnown RBP26.72■■□□□ 1.87
SP3-208ENST00000640958 PRR36Q9H6K5 1346 aa26.72■■□□□ 1.87
SP3-208ENST00000640958 CCDC27Q2M243 656 aa26.72■■□□□ 1.87
SP3-208ENST00000640958 CCDC61Q9Y6R9 512 aa26.72■■□□□ 1.87
SP3-208ENST00000640958 CRBNQ96SW2 442 aa26.71■■□□□ 1.87
SP3-208ENST00000640958 PLPPR3Q6T4P5 718 aa26.71■■□□□ 1.87
SP3-208ENST00000640958 NCKAP5LQ9HCH0 1330 aa26.7■■□□□ 1.86
SP3-208ENST00000640958 RIMS1Q86UR5 1692 aaKnown RBP26.7■■□□□ 1.86
SP3-208ENST00000640958 SLC26A8Q96RN1 970 aa26.69■■□□□ 1.86
SP3-208ENST00000640958 NEUROD2Q15784 382 aa26.69■■□□□ 1.86
SP3-208ENST00000640958 C20orf194Q5TEA3 1177 aa26.69■■□□□ 1.86
SP3-208ENST00000640958 NRKQ7Z2Y5 1582 aa26.68■■□□□ 1.86
SP3-208ENST00000640958 CEP170BQ9Y4F5 1589 aaPredicted RBP26.68■■□□□ 1.86
SP3-208ENST00000640958 WDR63Q8IWG1 891 aa26.68■■□□□ 1.86
SP3-208ENST00000640958 PTCH1Q13635 1447 aa26.67■■□□□ 1.86
SP3-208ENST00000640958 THEMISQ8N1K5 641 aaPredicted RBP26.67■■□□□ 1.86
SP3-208ENST00000640958 TBX22Q9Y458 520 aa26.67■■□□□ 1.86
SP3-208ENST00000640958 PLEKHF1Q96S99 279 aa26.66■■□□□ 1.86
SP3-208ENST00000640958 U2SURPO15042 1029 aaKnown RBP26.66■■□□□ 1.86
SP3-208ENST00000640958 XRN1Q8IZH2 1706 aaKnown RBP26.66■■□□□ 1.86
SP3-208ENST00000640958 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.65■■□□□ 1.86
SP3-208ENST00000640958 DIAPH1O60610 1272 aaKnown RBP26.65■■□□□ 1.86
SP3-208ENST00000640958 NME9Q86XW9 330 aa26.65■■□□□ 1.86
SP3-208ENST00000640958 POLKQ9UBT6 870 aa26.65■■□□□ 1.86
SP3-208ENST00000640958 LRRC7Q96NW7 1537 aa26.62■■□□□ 1.85
SP3-208ENST00000640958 AATKQ6ZMQ8 1374 aa26.62■■□□□ 1.85
SP3-208ENST00000640958 CDK12Q9NYV4 1490 aaPredicted RBP26.61■■□□□ 1.85
SP3-208ENST00000640958 AMOTL2Q9Y2J4 779 aa26.61■■□□□ 1.85
SP3-208ENST00000640958 FBLN1P23142 703 aa26.6■■□□□ 1.85
SP3-208ENST00000640958 ZNF692Q9BU19 519 aaPredicted RBP26.6■■□□□ 1.85
SP3-208ENST00000640958 ZRANB1Q9UGI0 708 aa26.6■■□□□ 1.85
SP3-208ENST00000640958 ZNF142P52746 1687 aaPredicted RBP26.59■■□□□ 1.85
SP3-208ENST00000640958 BCAR3O75815 825 aa26.59■■□□□ 1.85
SP3-208ENST00000640958 ADAMTSL3P82987 1691 aa26.59■■□□□ 1.85
SP3-208ENST00000640958 PLEKHG3A1L390 1219 aa26.57■■□□□ 1.84
SP3-208ENST00000640958 TMPOP42166 694 aaKnown RBP26.57■■□□□ 1.84
SP3-208ENST00000640958 MAPK8IP3Q9UPT6 1336 aa26.56■■□□□ 1.84
SP3-208ENST00000640958 COG3Q96JB2 828 aa26.56■■□□□ 1.84
SP3-208ENST00000640958 EMILIN1Q9Y6C2 1016 aa26.55■■□□□ 1.84
SP3-208ENST00000640958 NALCNQ8IZF0 1738 aa26.54■■□□□ 1.84
SP3-208ENST00000640958 USP6P35125 1406 aa26.54■■□□□ 1.84
SP3-208ENST00000640958 ACEP12821 1306 aa26.54■■□□□ 1.84
SP3-208ENST00000640958 TRIM35Q9UPQ4 493 aa26.53■■□□□ 1.84
SP3-208ENST00000640958 RGPD8O14715 1765 aaPredicted RBP26.53■■□□□ 1.84
SP3-208ENST00000640958 PPM1GO15355 546 aaPredicted RBP26.53■■□□□ 1.84
SP3-208ENST00000640958 PNNQ9H307 717 aaKnown RBP26.53■■□□□ 1.84
SP3-208ENST00000640958 MYH16Q9H6N6 1097 aa26.53■■□□□ 1.84
SP3-208ENST00000640958 FCHSD2O94868 740 aa26.52■■□□□ 1.84
SP3-208ENST00000640958 TTC21BQ7Z4L5 1316 aa26.52■■□□□ 1.84
SP3-208ENST00000640958 OVOS2A0A0J9YW53 1432 aa26.51■■□□□ 1.84
SP3-208ENST00000640958 OVOS2Q6IE36 1432 aa26.51■■□□□ 1.84
SP3-208ENST00000640958 PIK3R4Q99570 1358 aa26.51■■□□□ 1.83
SP3-208ENST00000640958 RSPH6AQ9H0K4 717 aa26.51■■□□□ 1.83
SP3-208ENST00000640958 NUTM2FA1L443 756 aa26.5■■□□□ 1.83
SP3-208ENST00000640958 SSH2Q76I76 1423 aa26.49■■□□□ 1.83
SP3-208ENST00000640958 RARSP54136 660 aaKnown RBP26.49■■□□□ 1.83
SP3-208ENST00000640958 IL13P35225 146 aa26.48■■□□□ 1.83
SP3-208ENST00000640958 IL16Q14005 1332 aa26.47■■□□□ 1.83
SP3-208ENST00000640958 KDM2BQ8NHM5 1336 aa26.47■■□□□ 1.83
SP3-208ENST00000640958 FANCIQ9NVI1 1328 aa26.47■■□□□ 1.83
SP3-208ENST00000640958 CHD2O14647 1828 aaKnown RBP26.46■■□□□ 1.83
SP3-208ENST00000640958 FMN2Q9NZ56 1722 aa26.46■■□□□ 1.83
SP3-208ENST00000640958 PRKAR2BP31323 418 aa26.46■■□□□ 1.83
SP3-208ENST00000640958 PDE3AQ14432 1141 aa26.46■■□□□ 1.83
SP3-208ENST00000640958 RIPK4P57078 832 aa26.45■■□□□ 1.83
SP3-208ENST00000640958 RRS1Q15050 365 aaKnown RBP26.45■■□□□ 1.83
SP3-208ENST00000640958 SETD1BQ9UPS6 1966 aaKnown RBP26.45■■□□□ 1.83
SP3-208ENST00000640958 KCNA6P17658 529 aa26.44■■□□□ 1.82
SP3-208ENST00000640958 ANKARQ7Z5J8 1434 aa26.43■■□□□ 1.82
SP3-208ENST00000640958 TSR2Q969E8 191 aaKnown RBP26.42■■□□□ 1.82
SP3-208ENST00000640958 PEAK1Q9H792 1746 aa26.42■■□□□ 1.82
SP3-208ENST00000640958 TCERG1O14776 1098 aaKnown RBP26.41■■□□□ 1.82
SP3-208ENST00000640958 USP31Q70CQ4 1352 aa26.41■■□□□ 1.82
SP3-208ENST00000640958 CT47B1P0C2W7 299 aaPredicted RBP26.41■■□□□ 1.82
SP3-208ENST00000640958 HMOX1P09601 288 aa26.4■■□□□ 1.82
SP3-208ENST00000640958 DLG5Q8TDM6 1919 aa26.4■■□□□ 1.82
SP3-208ENST00000640958 CANXP27824 592 aaKnown RBP26.39■■□□□ 1.82
SP3-208ENST00000640958 TTC21AQ8NDW8 1320 aa26.39■■□□□ 1.82
SP3-208ENST00000640958 CENPQQ7L2Z9 268 aaPredicted RBP26.39■■□□□ 1.81
SP3-208ENST00000640958 PHACTR3Q96KR7 559 aa26.38■■□□□ 1.81
SP3-208ENST00000640958 NFE2L2Q16236 605 aa26.38■■□□□ 1.81
SP3-208ENST00000640958 ANKLE2Q86XL3 938 aa26.38■■□□□ 1.81
SP3-208ENST00000640958 PMFBP1Q8TBY8 1022 aa26.38■■□□□ 1.81
SP3-208ENST00000640958 PIK3C2AO00443 1686 aa26.38■■□□□ 1.81
SP3-208ENST00000640958 NEFMP07197 916 aa26.37■■□□□ 1.81
SP3-208ENST00000640958 PANK1Q8TE04 598 aa26.36■■□□□ 1.81
SP3-208ENST00000640958 FRAT1Q92837 279 aaPredicted RBP26.36■■□□□ 1.81
SP3-208ENST00000640958 EXOSC9Q06265 439 aaKnown RBP26.36■■□□□ 1.81
SP3-208ENST00000640958 RGPD1P0DJD0 1748 aa26.36■■□□□ 1.81
SP3-208ENST00000640958 BCL2L13Q9BXK5 485 aa26.35■■□□□ 1.81
SP3-208ENST00000640958 MS4A1P11836 297 aa26.33■■□□□ 1.81
SP3-208ENST00000640958 USP54Q70EL1 1684 aa26.33■■□□□ 1.81
SP3-208ENST00000640958 COG6Q9Y2V7 657 aa26.33■■□□□ 1.81
SP3-208ENST00000640958 MARF1Q9Y4F3 1742 aaKnown RBP26.32■■□□□ 1.8
SP3-208ENST00000640958 NGDNQ8NEJ9 315 aaKnown RBP26.32■■□□□ 1.8
SP3-208ENST00000640958 EIF4A2Q14240 407 aaKnown RBP26.31■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 128.6 ms