RNA–Protein interactions for RNA: ENST00000640568.1

TSPAN9-208, Transcript of tetraspanin 9, humanhuman

TSL 5

Gene TSPAN9, Length 1,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-208ENST00000640568 EDC4Q6P2E9 1401 aaKnown RBP29.68■■■□□ 2.34
TSPAN9-208ENST00000640568 SBNO1A3KN83 1393 aa29.67■■■□□ 2.34
TSPAN9-208ENST00000640568 NSD3Q9BZ95 1437 aa29.66■■■□□ 2.34
TSPAN9-208ENST00000640568 TNS3Q68CZ2 1445 aa29.65■■■□□ 2.34
TSPAN9-208ENST00000640568 LMOD2Q6P5Q4 547 aa29.65■■■□□ 2.34
TSPAN9-208ENST00000640568 LRRC59Q96AG4 307 aaKnown RBP29.65■■■□□ 2.34
TSPAN9-208ENST00000640568 TTC21BQ7Z4L5 1316 aa29.64■■■□□ 2.34
TSPAN9-208ENST00000640568 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.64■■■□□ 2.34
TSPAN9-208ENST00000640568 KIF20BQ96Q89 1820 aa29.64■■■□□ 2.34
TSPAN9-208ENST00000640568 ALS2Q96Q42 1657 aa29.64■■■□□ 2.33
TSPAN9-208ENST00000640568 HSPA1LP34931 641 aa29.63■■■□□ 2.33
TSPAN9-208ENST00000640568 DDX10Q13206 875 aaKnown RBP29.63■■■□□ 2.33
TSPAN9-208ENST00000640568 TTC21AQ8NDW8 1320 aa29.63■■■□□ 2.33
TSPAN9-208ENST00000640568 SSH2Q76I76 1423 aa29.62■■■□□ 2.33
TSPAN9-208ENST00000640568 SPATA31A3Q5VYP0 1347 aa29.62■■■□□ 2.33
TSPAN9-208ENST00000640568 CARD14Q9BXL6 1004 aa29.61■■■□□ 2.33
TSPAN9-208ENST00000640568 KNSTRNQ9Y448 316 aa29.61■■■□□ 2.33
TSPAN9-208ENST00000640568 ABTB2Q8N961 1025 aa29.6■■■□□ 2.33
TSPAN9-208ENST00000640568 ARHGEF10O15013 1369 aa29.59■■■□□ 2.33
TSPAN9-208ENST00000640568 PIK3C2AO00443 1686 aa29.59■■■□□ 2.33
TSPAN9-208ENST00000640568 CGNL1Q0VF96 1302 aa29.57■■■□□ 2.32
TSPAN9-208ENST00000640568 SHPRHQ149N8 1683 aa29.56■■■□□ 2.32
TSPAN9-208ENST00000640568 JCADQ9P266 1359 aa29.54■■■□□ 2.32
TSPAN9-208ENST00000640568 NUTM2GQ5VZR2 741 aa29.54■■■□□ 2.32
TSPAN9-208ENST00000640568 NME9Q86XW9 330 aa29.54■■■□□ 2.32
TSPAN9-208ENST00000640568 NLRP6P59044 892 aa29.53■■■□□ 2.32
TSPAN9-208ENST00000640568 PNPLA6Q8IY17 1366 aa29.51■■■□□ 2.32
TSPAN9-208ENST00000640568 ANKRD26Q9UPS8 1709 aa29.51■■■□□ 2.31
TSPAN9-208ENST00000640568 PLEKHG5O94827 1062 aa29.51■■■□□ 2.31
TSPAN9-208ENST00000640568 NLRP13Q86W25 1043 aa29.51■■■□□ 2.31
TSPAN9-208ENST00000640568 COL22A1Q8NFW1 1626 aaPredicted RBP29.51■■■□□ 2.31
TSPAN9-208ENST00000640568 PER1O15534 1290 aaPredicted RBP29.5■■■□□ 2.31
TSPAN9-208ENST00000640568 USP54Q70EL1 1684 aa29.5■■■□□ 2.31
TSPAN9-208ENST00000640568 FYB1O15117 783 aa29.48■■■□□ 2.31
TSPAN9-208ENST00000640568 COG3Q96JB2 828 aa29.48■■■□□ 2.31
TSPAN9-208ENST00000640568 GGNBP2Q9H3C7 697 aa29.48■■■□□ 2.31
TSPAN9-208ENST00000640568 NSD2O96028 1365 aa29.48■■■□□ 2.31
TSPAN9-208ENST00000640568 MED1Q15648 1581 aaPredicted RBP29.47■■■□□ 2.31
TSPAN9-208ENST00000640568 MARF1Q9Y4F3 1742 aaKnown RBP29.47■■■□□ 2.31
TSPAN9-208ENST00000640568 HAP1P54257 671 aaPredicted RBP29.47■■■□□ 2.31
TSPAN9-208ENST00000640568 USP31Q70CQ4 1352 aa29.46■■■□□ 2.31
TSPAN9-208ENST00000640568 PHRF1Q9P1Y6 1649 aaKnown RBP29.46■■■□□ 2.31
TSPAN9-208ENST00000640568 ABCA3Q99758 1704 aa29.46■■■□□ 2.31
TSPAN9-208ENST00000640568 ZRANB1Q9UGI0 708 aa29.46■■■□□ 2.31
TSPAN9-208ENST00000640568 CRYBG1Q9Y4K1 1723 aa29.45■■■□□ 2.31
TSPAN9-208ENST00000640568 OVOS2A0A0J9YW53 1432 aa29.44■■■□□ 2.3
TSPAN9-208ENST00000640568 OVOS2Q6IE36 1432 aa29.44■■■□□ 2.3
TSPAN9-208ENST00000640568 CNGB1Q14028 1251 aaPredicted RBP29.44■■■□□ 2.3
TSPAN9-208ENST00000640568 AMER1Q5JTC6 1135 aaPredicted RBP29.43■■■□□ 2.3
TSPAN9-208ENST00000640568 CC2D1BQ5T0F9 858 aaKnown RBP29.42■■■□□ 2.3
TSPAN9-208ENST00000640568 CABLES1Q8TDN4 633 aa29.42■■■□□ 2.3
TSPAN9-208ENST00000640568 USP19O94966 1318 aa29.4■■■□□ 2.3
TSPAN9-208ENST00000640568 NPC1L1Q9UHC9 1359 aa29.4■■■□□ 2.3
TSPAN9-208ENST00000640568 SLIT3O75094 1523 aa29.4■■■□□ 2.3
TSPAN9-208ENST00000640568 SPATA31A6Q5VVP1 1343 aa29.4■■■□□ 2.3
TSPAN9-208ENST00000640568 SOX12O15370 315 aa29.39■■■□□ 2.3
TSPAN9-208ENST00000640568 NUTM2BA6NNL0 878 aaPredicted RBP29.38■■■□□ 2.29
TSPAN9-208ENST00000640568 NUTM2EB1AL46 878 aaPredicted RBP29.38■■■□□ 2.29
TSPAN9-208ENST00000640568 ILDR1Q86SU0 546 aaPredicted RBP29.38■■■□□ 2.29
TSPAN9-208ENST00000640568 MORC1Q86VD1 984 aa29.38■■■□□ 2.29
TSPAN9-208ENST00000640568 NUTM2AQ8IVF1 878 aaPredicted RBP29.38■■■□□ 2.29
TSPAN9-208ENST00000640568 KCNH5Q8NCM2 988 aa29.38■■■□□ 2.29
TSPAN9-208ENST00000640568 GCP02774 474 aa29.36■■■□□ 2.29
TSPAN9-208ENST00000640568 LTN1O94822 1766 aa29.33■■■□□ 2.29
TSPAN9-208ENST00000640568 MAP2P11137 1827 aaKnown RBP29.32■■■□□ 2.28
TSPAN9-208ENST00000640568 NFAT5O94916 1531 aa29.31■■■□□ 2.28
TSPAN9-208ENST00000640568 TNNT2P45379 298 aaPredicted RBP29.31■■■□□ 2.28
TSPAN9-208ENST00000640568 ZBTB7CA1YPR0 619 aa29.29■■■□□ 2.28
TSPAN9-208ENST00000640568 ZC3H6P61129 1189 aaKnown RBP29.29■■■□□ 2.28
TSPAN9-208ENST00000640568 ADAMTS2O95450 1211 aa29.29■■■□□ 2.28
TSPAN9-208ENST00000640568 MEX3CQ5U5Q3 659 aaKnown RBP29.28■■■□□ 2.28
TSPAN9-208ENST00000640568 LRP6O75581 1613 aa29.27■■■□□ 2.28
TSPAN9-208ENST00000640568 KIAA0232Q92628 1395 aa29.26■■■□□ 2.27
TSPAN9-208ENST00000640568 PRDM11Q9NQV5 511 aa29.25■■■□□ 2.27
TSPAN9-208ENST00000640568 AATKQ6ZMQ8 1374 aa29.25■■■□□ 2.27
TSPAN9-208ENST00000640568 CPDO75976 1380 aa29.24■■■□□ 2.27
TSPAN9-208ENST00000640568 FBLN1P23142 703 aa29.23■■■□□ 2.27
TSPAN9-208ENST00000640568 RALBP1Q15311 655 aa29.23■■■□□ 2.27
TSPAN9-208ENST00000640568 PARD3Q8TEW0 1356 aa29.23■■■□□ 2.27
TSPAN9-208ENST00000640568 COL14A1Q05707 1796 aaKnown RBP29.23■■■□□ 2.27
TSPAN9-208ENST00000640568 ANP32CO43423 234 aa29.23■■■□□ 2.27
TSPAN9-208ENST00000640568 RRS1Q15050 365 aaKnown RBP29.23■■■□□ 2.27
TSPAN9-208ENST00000640568 ARHGEF25Q86VW2 580 aa29.21■■■□□ 2.27
TSPAN9-208ENST00000640568 AMPHP49418 695 aa29.2■■■□□ 2.26
TSPAN9-208ENST00000640568 DIEXFQ68CQ4 756 aaKnown RBP29.2■■■□□ 2.26
TSPAN9-208ENST00000640568 MAP3K19Q56UN5 1328 aa29.2■■■□□ 2.26
TSPAN9-208ENST00000640568 PLCH1Q4KWH8 1693 aa29.19■■■□□ 2.26
TSPAN9-208ENST00000640568 PPM1GO15355 546 aaPredicted RBP29.18■■■□□ 2.26
TSPAN9-208ENST00000640568 CHRNA2Q15822 529 aa29.18■■■□□ 2.26
TSPAN9-208ENST00000640568 C8orf37Q96NL8 207 aa29.18■■■□□ 2.26
TSPAN9-208ENST00000640568 PRKRIP1Q9H875 184 aaPredicted RBP29.18■■■□□ 2.26
TSPAN9-208ENST00000640568 RGPD5Q99666 1765 aa29.17■■■□□ 2.26
TSPAN9-208ENST00000640568 EMILIN1Q9Y6C2 1016 aa29.17■■■□□ 2.26
TSPAN9-208ENST00000640568 ABCC6O95255 1503 aa29.16■■■□□ 2.26
TSPAN9-208ENST00000640568 COL18A1P39060 1754 aa29.16■■■□□ 2.26
TSPAN9-208ENST00000640568 POLKQ9UBT6 870 aa29.16■■■□□ 2.26
TSPAN9-208ENST00000640568 RTL1A6NKG5 1358 aa29.15■■■□□ 2.26
TSPAN9-208ENST00000640568 FAM83GA6ND36 823 aa29.15■■■□□ 2.26
TSPAN9-208ENST00000640568 NGLY1Q96IV0 654 aa29.15■■■□□ 2.26
TSPAN9-208ENST00000640568 PEAK1Q9H792 1746 aa29.15■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms