RNA–Protein interactions for RNA: ENST00000639943.1

PAX6-261, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 2,584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-261ENST00000639943 SETD1BQ9UPS6 1966 aaKnown RBP16.15■□□□□ 0.18
PAX6-261ENST00000639943 EDC4Q6P2E9 1401 aaKnown RBP16.14■□□□□ 0.17
PAX6-261ENST00000639943 HAP1P54257 671 aaPredicted RBP16.14■□□□□ 0.17
PAX6-261ENST00000639943 GOLGA2Q08379 1002 aa16.14■□□□□ 0.17
PAX6-261ENST00000639943 AMOTL2Q9Y2J4 779 aa16.14■□□□□ 0.17
PAX6-261ENST00000639943 PTCH1Q13635 1447 aa16.13■□□□□ 0.17
PAX6-261ENST00000639943 ITSN1Q15811 1721 aa16.13■□□□□ 0.17
PAX6-261ENST00000639943 ZNF142P52746 1687 aaPredicted RBP16.13■□□□□ 0.17
PAX6-261ENST00000639943 AKAP12Q02952 1782 aa16.13■□□□□ 0.17
PAX6-261ENST00000639943 RUNDC1Q96C34 613 aa16.12■□□□□ 0.17
PAX6-261ENST00000639943 MON2Q7Z3U7 1717 aa16.12■□□□□ 0.17
PAX6-261ENST00000639943 ZNF692Q9BU19 519 aaPredicted RBP16.12■□□□□ 0.17
PAX6-261ENST00000639943 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.11■□□□□ 0.17
PAX6-261ENST00000639943 RRP1P56182 461 aaKnown RBP16.11■□□□□ 0.17
PAX6-261ENST00000639943 PIK3R4Q99570 1358 aa16.1■□□□□ 0.17
PAX6-261ENST00000639943 PRR36Q9H6K5 1346 aa16.1■□□□□ 0.17
PAX6-261ENST00000639943 SLFN5Q08AF3 891 aa16.09■□□□□ 0.17
PAX6-261ENST00000639943 DUSP27Q5VZP5 1158 aa16.09■□□□□ 0.17
PAX6-261ENST00000639943 XRN1Q8IZH2 1706 aaKnown RBP16.09■□□□□ 0.17
PAX6-261ENST00000639943 TOPAZ1Q8N9V7 1692 aa16.09■□□□□ 0.17
PAX6-261ENST00000639943 TULP1O00294 542 aaPredicted RBP16.09■□□□□ 0.17
PAX6-261ENST00000639943 COL3A1P02461 1466 aaPredicted RBP16.08■□□□□ 0.17
PAX6-261ENST00000639943 ANKLE2Q86XL3 938 aa16.08■□□□□ 0.17
PAX6-261ENST00000639943 U2AF1L5P0DN76 240 aaPredicted RBP16.08■□□□□ 0.16
PAX6-261ENST00000639943 U2AF1Q01081 240 aaKnown RBP eCLIP16.08■□□□□ 0.16
PAX6-261ENST00000639943 NCKAP5LQ9HCH0 1330 aa16.08■□□□□ 0.16
PAX6-261ENST00000639943 TRMT2AQ8IZ69 625 aaKnown RBP16.07■□□□□ 0.16
PAX6-261ENST00000639943 PNPLA6Q8IY17 1366 aa16.07■□□□□ 0.16
PAX6-261ENST00000639943 MAP2P11137 1827 aaKnown RBP16.07■□□□□ 0.16
PAX6-261ENST00000639943 PLEKHG3A1L390 1219 aa16.07■□□□□ 0.16
PAX6-261ENST00000639943 E9PSI1 815 aa16.07■□□□□ 0.16
PAX6-261ENST00000639943 IQSEC2Q5JU85 1478 aa16.07■□□□□ 0.16
PAX6-261ENST00000639943 TCP11L2Q8N4U5 519 aa16.06■□□□□ 0.16
PAX6-261ENST00000639943 WWC1Q8IX03 1113 aa16.05■□□□□ 0.16
PAX6-261ENST00000639943 DIAPH1O60610 1272 aaKnown RBP16.04■□□□□ 0.16
PAX6-261ENST00000639943 NME9Q86XW9 330 aa16.04■□□□□ 0.16
PAX6-261ENST00000639943 COG3Q96JB2 828 aa16.04■□□□□ 0.16
PAX6-261ENST00000639943 AATKQ6ZMQ8 1374 aa16.03■□□□□ 0.16
PAX6-261ENST00000639943 CCDC27Q2M243 656 aa16.03■□□□□ 0.16
PAX6-261ENST00000639943 POLKQ9UBT6 870 aa16.03■□□□□ 0.16
PAX6-261ENST00000639943 ACEP12821 1306 aa16.03■□□□□ 0.16
PAX6-261ENST00000639943 U2SURPO15042 1029 aaKnown RBP16.03■□□□□ 0.16
PAX6-261ENST00000639943 CHD2O14647 1828 aaKnown RBP16.03■□□□□ 0.16
PAX6-261ENST00000639943 B4GALNT3Q6L9W6 998 aa16.02■□□□□ 0.16
PAX6-261ENST00000639943 PNNQ9H307 717 aaKnown RBP16.02■□□□□ 0.16
PAX6-261ENST00000639943 NRKQ7Z2Y5 1582 aa16.02■□□□□ 0.16
PAX6-261ENST00000639943 NKTRP30414 1462 aaKnown RBP16.02■□□□□ 0.16
PAX6-261ENST00000639943 KCNA6P17658 529 aa16.02■□□□□ 0.15
PAX6-261ENST00000639943 WDR63Q8IWG1 891 aa16.01■□□□□ 0.15
PAX6-261ENST00000639943 TTC21BQ7Z4L5 1316 aa16.01■□□□□ 0.15
PAX6-261ENST00000639943 SPINK5Q9NQ38 1064 aaPredicted RBP16.01■□□□□ 0.15
PAX6-261ENST00000639943 NUTM2FA1L443 756 aa16■□□□□ 0.15
PAX6-261ENST00000639943 NEUROD2Q15784 382 aa16■□□□□ 0.15
PAX6-261ENST00000639943 USP6P35125 1406 aa16■□□□□ 0.15
PAX6-261ENST00000639943 PLEKHF1Q96S99 279 aa16■□□□□ 0.15
PAX6-261ENST00000639943 RRP7AQ9Y3A4 280 aaKnown RBP16■□□□□ 0.15
PAX6-261ENST00000639943 ZRANB1Q9UGI0 708 aa15.99■□□□□ 0.15
PAX6-261ENST00000639943 RGPD8O14715 1765 aaPredicted RBP15.99■□□□□ 0.15
PAX6-261ENST00000639943 ANKARQ7Z5J8 1434 aa15.99■□□□□ 0.15
PAX6-261ENST00000639943 PPM1GO15355 546 aaPredicted RBP15.99■□□□□ 0.15
PAX6-261ENST00000639943 CDK12Q9NYV4 1490 aaPredicted RBP15.99■□□□□ 0.15
PAX6-261ENST00000639943 MAPK8IP3Q9UPT6 1336 aa15.99■□□□□ 0.15
PAX6-261ENST00000639943 CCDC136Q96JN2 1154 aa15.98■□□□□ 0.15
PAX6-261ENST00000639943 TSHZ2Q9NRE2 1034 aa15.98■□□□□ 0.15
PAX6-261ENST00000639943 DMRT2Q9Y5R5 561 aa15.98■□□□□ 0.15
PAX6-261ENST00000639943 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.98■□□□□ 0.15
PAX6-261ENST00000639943 FBLN1P23142 703 aa15.97■□□□□ 0.15
PAX6-261ENST00000639943 FCHSD2O94868 740 aa15.97■□□□□ 0.15
PAX6-261ENST00000639943 EMILIN1Q9Y6C2 1016 aa15.97■□□□□ 0.15
PAX6-261ENST00000639943 FMN2Q9NZ56 1722 aa15.97■□□□□ 0.15
PAX6-261ENST00000639943 EXOC6Q8TAG9 804 aa15.96■□□□□ 0.15
PAX6-261ENST00000639943 SSH2Q76I76 1423 aa15.96■□□□□ 0.15
PAX6-261ENST00000639943 TTC21AQ8NDW8 1320 aa15.96■□□□□ 0.15
PAX6-261ENST00000639943 PLIN1O60240 522 aa15.96■□□□□ 0.15
PAX6-261ENST00000639943 NPHP4O75161 1426 aaPredicted RBP15.96■□□□□ 0.15
PAX6-261ENST00000639943 OVOS2A0A0J9YW53 1432 aa15.95■□□□□ 0.14
PAX6-261ENST00000639943 OVOS2Q6IE36 1432 aa15.95■□□□□ 0.14
PAX6-261ENST00000639943 TMPOP42166 694 aaKnown RBP15.95■□□□□ 0.14
PAX6-261ENST00000639943 NGDNQ8NEJ9 315 aaKnown RBP15.95■□□□□ 0.14
PAX6-261ENST00000639943 PMFBP1Q8TBY8 1022 aa15.94■□□□□ 0.14
PAX6-261ENST00000639943 NALCNQ8IZF0 1738 aa15.94■□□□□ 0.14
PAX6-261ENST00000639943 NEFMP07197 916 aa15.93■□□□□ 0.14
PAX6-261ENST00000639943 IL13P35225 146 aa15.93■□□□□ 0.14
PAX6-261ENST00000639943 RRS1Q15050 365 aaKnown RBP15.93■□□□□ 0.14
PAX6-261ENST00000639943 MYH16Q9H6N6 1097 aa15.93■□□□□ 0.14
PAX6-261ENST00000639943 RSPH6AQ9H0K4 717 aa15.92■□□□□ 0.14
PAX6-261ENST00000639943 LRRC7Q96NW7 1537 aa15.92■□□□□ 0.14
PAX6-261ENST00000639943 USP31Q70CQ4 1352 aa15.92■□□□□ 0.14
PAX6-261ENST00000639943 CRBNQ96SW2 442 aa15.9■□□□□ 0.14
PAX6-261ENST00000639943 PRKAR2BP31323 418 aa15.9■□□□□ 0.14
PAX6-261ENST00000639943 RIPK4P57078 832 aa15.9■□□□□ 0.14
PAX6-261ENST00000639943 TRIM35Q9UPQ4 493 aa15.9■□□□□ 0.14
PAX6-261ENST00000639943 IL16Q14005 1332 aa15.89■□□□□ 0.14
PAX6-261ENST00000639943 ADGRL3Q9HAR2 1447 aa15.89■□□□□ 0.13
PAX6-261ENST00000639943 C20orf194Q5TEA3 1177 aa15.87■□□□□ 0.13
PAX6-261ENST00000639943 BCAR3O75815 825 aa15.87■□□□□ 0.13
PAX6-261ENST00000639943 HMOX1P09601 288 aa15.87■□□□□ 0.13
PAX6-261ENST00000639943 NWD1Q149M9 1564 aa15.86■□□□□ 0.13
PAX6-261ENST00000639943 CT47B1P0C2W7 299 aaPredicted RBP15.86■□□□□ 0.13
PAX6-261ENST00000639943 PIK3C2AO00443 1686 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms