RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 NKTRP30414 1462 aaKnown RBP19.85■□□□□ 0.77
TRIM3-215ENST00000639856 PIK3R4Q99570 1358 aa19.85■□□□□ 0.77
TRIM3-215ENST00000639856 CHD2O14647 1828 aaKnown RBP19.84■□□□□ 0.77
TRIM3-215ENST00000639856 GOLGA2Q08379 1002 aa19.84■□□□□ 0.77
TRIM3-215ENST00000639856 EXOC6Q8TAG9 804 aa19.84■□□□□ 0.77
TRIM3-215ENST00000639856 DUSP27Q5VZP5 1158 aa19.84■□□□□ 0.77
TRIM3-215ENST00000639856 NME9Q86XW9 330 aa19.83■□□□□ 0.77
TRIM3-215ENST00000639856 CFAP53Q96M91 514 aa19.83■□□□□ 0.77
TRIM3-215ENST00000639856 RGPD8O14715 1765 aaPredicted RBP19.83■□□□□ 0.76
TRIM3-215ENST00000639856 APAF1O14727 1248 aa19.82■□□□□ 0.76
TRIM3-215ENST00000639856 FBLN1P23142 703 aa19.82■□□□□ 0.76
TRIM3-215ENST00000639856 ZRANB1Q9UGI0 708 aa19.82■□□□□ 0.76
TRIM3-215ENST00000639856 COL3A1P02461 1466 aaPredicted RBP19.81■□□□□ 0.76
TRIM3-215ENST00000639856 NGEFQ8N5V2 710 aa19.81■□□□□ 0.76
TRIM3-215ENST00000639856 NPHP4O75161 1426 aaPredicted RBP19.8■□□□□ 0.76
TRIM3-215ENST00000639856 NRKQ7Z2Y5 1582 aa19.8■□□□□ 0.76
TRIM3-215ENST00000639856 ACEP12821 1306 aa19.8■□□□□ 0.76
TRIM3-215ENST00000639856 SLFN5Q08AF3 891 aa19.79■□□□□ 0.76
TRIM3-215ENST00000639856 FANCIQ9NVI1 1328 aa19.79■□□□□ 0.76
TRIM3-215ENST00000639856 PLEKHG3A1L390 1219 aa19.78■□□□□ 0.76
TRIM3-215ENST00000639856 PLIN1O60240 522 aa19.78■□□□□ 0.76
TRIM3-215ENST00000639856 TRMT2AQ8IZ69 625 aaKnown RBP19.78■□□□□ 0.76
TRIM3-215ENST00000639856 RBM33Q96EV2 1170 aaKnown RBP19.78■□□□□ 0.76
TRIM3-215ENST00000639856 NALCNQ8IZF0 1738 aa19.77■□□□□ 0.76
TRIM3-215ENST00000639856 MAP2P11137 1827 aaKnown RBP19.77■□□□□ 0.76
TRIM3-215ENST00000639856 ZNF692Q9BU19 519 aaPredicted RBP19.77■□□□□ 0.76
TRIM3-215ENST00000639856 PMFBP1Q8TBY8 1022 aa19.76■□□□□ 0.75
TRIM3-215ENST00000639856 FMN2Q9NZ56 1722 aa19.75■□□□□ 0.75
TRIM3-215ENST00000639856 USP6P35125 1406 aa19.75■□□□□ 0.75
TRIM3-215ENST00000639856 U2AF1L5P0DN76 240 aaPredicted RBP19.75■□□□□ 0.75
TRIM3-215ENST00000639856 U2AF1Q01081 240 aaKnown RBP eCLIP19.75■□□□□ 0.75
TRIM3-215ENST00000639856 POLKQ9UBT6 870 aa19.74■□□□□ 0.75
TRIM3-215ENST00000639856 IQSEC2Q5JU85 1478 aa19.74■□□□□ 0.75
TRIM3-215ENST00000639856 PNPLA6Q8IY17 1366 aa19.73■□□□□ 0.75
TRIM3-215ENST00000639856 TTC21BQ7Z4L5 1316 aa19.73■□□□□ 0.75
TRIM3-215ENST00000639856 PPM1GO15355 546 aaPredicted RBP19.73■□□□□ 0.75
TRIM3-215ENST00000639856 RUNDC1Q96C34 613 aa19.73■□□□□ 0.75
TRIM3-215ENST00000639856 COG3Q96JB2 828 aa19.72■□□□□ 0.75
TRIM3-215ENST00000639856 E9PSI1 815 aa19.72■□□□□ 0.75
TRIM3-215ENST00000639856 U2SURPO15042 1029 aaKnown RBP19.72■□□□□ 0.75
TRIM3-215ENST00000639856 RRP7AQ9Y3A4 280 aaKnown RBP19.72■□□□□ 0.75
TRIM3-215ENST00000639856 EMILIN1Q9Y6C2 1016 aa19.72■□□□□ 0.75
TRIM3-215ENST00000639856 CRBNQ96SW2 442 aa19.71■□□□□ 0.75
TRIM3-215ENST00000639856 SPINK5Q9NQ38 1064 aaPredicted RBP19.71■□□□□ 0.75
TRIM3-215ENST00000639856 DMRT2Q9Y5R5 561 aa19.7■□□□□ 0.74
TRIM3-215ENST00000639856 ANKARQ7Z5J8 1434 aa19.7■□□□□ 0.74
TRIM3-215ENST00000639856 NEUROD2Q15784 382 aa19.7■□□□□ 0.74
TRIM3-215ENST00000639856 TCP11L2Q8N4U5 519 aa19.7■□□□□ 0.74
TRIM3-215ENST00000639856 SSH2Q76I76 1423 aa19.7■□□□□ 0.74
TRIM3-215ENST00000639856 DIAPH1O60610 1272 aaKnown RBP19.69■□□□□ 0.74
TRIM3-215ENST00000639856 NGDNQ8NEJ9 315 aaKnown RBP19.69■□□□□ 0.74
TRIM3-215ENST00000639856 RRS1Q15050 365 aaKnown RBP19.68■□□□□ 0.74
TRIM3-215ENST00000639856 WWC1Q8IX03 1113 aa19.68■□□□□ 0.74
TRIM3-215ENST00000639856 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.68■□□□□ 0.74
TRIM3-215ENST00000639856 AATKQ6ZMQ8 1374 aa19.68■□□□□ 0.74
TRIM3-215ENST00000639856 OVOS2A0A0J9YW53 1432 aa19.68■□□□□ 0.74
TRIM3-215ENST00000639856 OVOS2Q6IE36 1432 aa19.68■□□□□ 0.74
TRIM3-215ENST00000639856 C20orf194Q5TEA3 1177 aa19.67■□□□□ 0.74
TRIM3-215ENST00000639856 NWD1Q149M9 1564 aa19.67■□□□□ 0.74
TRIM3-215ENST00000639856 ADGRL3Q9HAR2 1447 aa19.67■□□□□ 0.74
TRIM3-215ENST00000639856 CDK12Q9NYV4 1490 aaPredicted RBP19.66■□□□□ 0.74
TRIM3-215ENST00000639856 ANP32EQ9BTT0 268 aa19.66■□□□□ 0.74
TRIM3-215ENST00000639856 PLEKHF1Q96S99 279 aa19.65■□□□□ 0.74
TRIM3-215ENST00000639856 MSH5O43196 834 aa19.64■□□□□ 0.74
TRIM3-215ENST00000639856 HSPA2P54652 639 aa19.64■□□□□ 0.73
TRIM3-215ENST00000639856 PHF23Q9BUL5 403 aaPredicted RBP19.63■□□□□ 0.73
TRIM3-215ENST00000639856 PIK3C2AO00443 1686 aa19.63■□□□□ 0.73
TRIM3-215ENST00000639856 LRRC7Q96NW7 1537 aa19.62■□□□□ 0.73
TRIM3-215ENST00000639856 KDM4FA0A1W2PPD8 638 aa19.62■□□□□ 0.73
TRIM3-215ENST00000639856 C14orf37Q86TY3 774 aa19.62■□□□□ 0.73
TRIM3-215ENST00000639856 TTC21AQ8NDW8 1320 aa19.62■□□□□ 0.73
TRIM3-215ENST00000639856 TCERG1O14776 1098 aaKnown RBP19.61■□□□□ 0.73
TRIM3-215ENST00000639856 SOX12O15370 315 aa19.61■□□□□ 0.73
TRIM3-215ENST00000639856 NCBP3Q53F19 620 aaKnown RBP19.61■□□□□ 0.73
TRIM3-215ENST00000639856 CCDC27Q2M243 656 aa19.6■□□□□ 0.73
TRIM3-215ENST00000639856 PEAK1Q9H792 1746 aa19.6■□□□□ 0.73
TRIM3-215ENST00000639856 IL13P35225 146 aa19.6■□□□□ 0.73
TRIM3-215ENST00000639856 USP31Q70CQ4 1352 aa19.6■□□□□ 0.73
TRIM3-215ENST00000639856 WDR63Q8IWG1 891 aa19.59■□□□□ 0.73
TRIM3-215ENST00000639856 PHF8Q9UPP1 1060 aa19.59■□□□□ 0.73
TRIM3-215ENST00000639856 STRCP1A6NGW2 1772 aa19.58■□□□□ 0.73
TRIM3-215ENST00000639856 MAPK8IP3Q9UPT6 1336 aa19.58■□□□□ 0.72
TRIM3-215ENST00000639856 HMOX1P09601 288 aa19.58■□□□□ 0.72
TRIM3-215ENST00000639856 PROSER2Q86WR7 435 aaPredicted RBP19.58■□□□□ 0.72
TRIM3-215ENST00000639856 MARF1Q9Y4F3 1742 aaKnown RBP19.58■□□□□ 0.72
TRIM3-215ENST00000639856 BCAR3O75815 825 aa19.57■□□□□ 0.72
TRIM3-215ENST00000639856 RSPH6AQ9H0K4 717 aa19.57■□□□□ 0.72
TRIM3-215ENST00000639856 TMPOP42166 694 aaKnown RBP19.57■□□□□ 0.72
TRIM3-215ENST00000639856 FCHSD2O94868 740 aa19.56■□□□□ 0.72
TRIM3-215ENST00000639856 PRKAR2BP31323 418 aa19.56■□□□□ 0.72
TRIM3-215ENST00000639856 ESCO1Q5FWF5 840 aa19.56■□□□□ 0.72
TRIM3-215ENST00000639856 NUTM2GQ5VZR2 741 aa19.56■□□□□ 0.72
TRIM3-215ENST00000639856 MS4A1P11836 297 aa19.55■□□□□ 0.72
TRIM3-215ENST00000639856 KDM2BQ8NHM5 1336 aa19.55■□□□□ 0.72
TRIM3-215ENST00000639856 PAK3O75914 559 aaPredicted RBP19.54■□□□□ 0.72
TRIM3-215ENST00000639856 LMTK3Q96Q04 1460 aa19.54■□□□□ 0.72
TRIM3-215ENST00000639856 NLRP6P59044 892 aa19.54■□□□□ 0.72
TRIM3-215ENST00000639856 TRIM35Q9UPQ4 493 aa19.54■□□□□ 0.72
TRIM3-215ENST00000639856 MAP3K19Q56UN5 1328 aa19.53■□□□□ 0.72
TRIM3-215ENST00000639856 EIF4A2Q14240 407 aaKnown RBP19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms