RNA–Protein interactions for RNA: ENST00000639595.1

NECAP1-218, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-218ENST00000639595 CPSF1Q10570 1443 aaKnown RBP11.17□□□□□ -0.62
NECAP1-218ENST00000639595 ADGRB2O60241 1585 aa11.17□□□□□ -0.62
NECAP1-218ENST00000639595 TMEM2Q9UHN6 1383 aa11.16□□□□□ -0.62
NECAP1-218ENST00000639595 MYH16Q9H6N6 1097 aa11.16□□□□□ -0.62
NECAP1-218ENST00000639595 ANKRD26Q9UPS8 1709 aa11.15□□□□□ -0.62
NECAP1-218ENST00000639595 CT47B1P0C2W7 299 aaPredicted RBP11.15□□□□□ -0.62
NECAP1-218ENST00000639595 AAMPQ13685 434 aa11.15□□□□□ -0.62
NECAP1-218ENST00000639595 DIAPH1O60610 1272 aaKnown RBP11.15□□□□□ -0.63
NECAP1-218ENST00000639595 TMPOP42166 694 aaKnown RBP11.15□□□□□ -0.63
NECAP1-218ENST00000639595 PNNQ9H307 717 aaKnown RBP11.15□□□□□ -0.63
NECAP1-218ENST00000639595 ANP32AP39687 249 aaKnown RBP11.14□□□□□ -0.63
NECAP1-218ENST00000639595 IPO9Q96P70 1041 aaKnown RBP11.14□□□□□ -0.63
NECAP1-218ENST00000639595 IL16Q14005 1332 aa11.14□□□□□ -0.63
NECAP1-218ENST00000639595 TXNDC2Q86VQ3 553 aa11.14□□□□□ -0.63
NECAP1-218ENST00000639595 POLKQ9UBT6 870 aa11.14□□□□□ -0.63
NECAP1-218ENST00000639595 TRIM35Q9UPQ4 493 aa11.14□□□□□ -0.63
NECAP1-218ENST00000639595 EDC4Q6P2E9 1401 aaKnown RBP11.13□□□□□ -0.63
NECAP1-218ENST00000639595 U2SURPO15042 1029 aaKnown RBP11.13□□□□□ -0.63
NECAP1-218ENST00000639595 FCHSD2O94868 740 aa11.13□□□□□ -0.63
NECAP1-218ENST00000639595 CCDC61Q9Y6R9 512 aa11.13□□□□□ -0.63
NECAP1-218ENST00000639595 NUDT16Q96DE0 195 aaKnown RBP11.13□□□□□ -0.63
NECAP1-218ENST00000639595 AATKQ6ZMQ8 1374 aa11.12□□□□□ -0.63
NECAP1-218ENST00000639595 PPIP5K1Q6PFW1 1433 aa11.12□□□□□ -0.63
NECAP1-218ENST00000639595 ADAMTS13Q76LX8 1427 aa11.12□□□□□ -0.63
NECAP1-218ENST00000639595 CPS1P31327 1500 aa11.12□□□□□ -0.63
NECAP1-218ENST00000639595 CDC42BPGQ6DT37 1551 aa11.12□□□□□ -0.63
NECAP1-218ENST00000639595 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.11□□□□□ -0.63
NECAP1-218ENST00000639595 NOP58Q9Y2X3 529 aaKnown RBP11.11□□□□□ -0.63
NECAP1-218ENST00000639595 KNDC1Q76NI1 1749 aa11.11□□□□□ -0.63
NECAP1-218ENST00000639595 PLEKHG1Q9ULL1 1385 aa11.11□□□□□ -0.63
NECAP1-218ENST00000639595 MAPK8IP3Q9UPT6 1336 aa11.11□□□□□ -0.63
NECAP1-218ENST00000639595 CLUAP1Q96AJ1 413 aa11.11□□□□□ -0.63
NECAP1-218ENST00000639595 ZNF692Q9BU19 519 aaPredicted RBP11.11□□□□□ -0.63
NECAP1-218ENST00000639595 PANK1Q8TE04 598 aa11.1□□□□□ -0.63
NECAP1-218ENST00000639595 UBR1Q8IWV7 1749 aa11.09□□□□□ -0.63
NECAP1-218ENST00000639595 ROBO2Q9HCK4 1378 aa11.09□□□□□ -0.63
NECAP1-218ENST00000639595 CANXP27824 592 aaKnown RBP11.09□□□□□ -0.63
NECAP1-218ENST00000639595 LTKP29376 864 aa11.09□□□□□ -0.63
NECAP1-218ENST00000639595 SKAP1Q86WV1 359 aa11.09□□□□□ -0.63
NECAP1-218ENST00000639595 RSPH6AQ9H0K4 717 aa11.09□□□□□ -0.63
NECAP1-218ENST00000639595 COG6Q9Y2V7 657 aa11.09□□□□□ -0.63
NECAP1-218ENST00000639595 KIF20BQ96Q89 1820 aa11.09□□□□□ -0.63
NECAP1-218ENST00000639595 EIF5BO60841 1220 aaKnown RBP11.09□□□□□ -0.63
NECAP1-218ENST00000639595 IGHDP01880 384 aa11.09□□□□□ -0.63
NECAP1-218ENST00000639595 RIPK4P57078 832 aa11.09□□□□□ -0.63
NECAP1-218ENST00000639595 FRAT1Q92837 279 aaPredicted RBP11.08□□□□□ -0.64
NECAP1-218ENST00000639595 RLBP1P12271 317 aa11.08□□□□□ -0.64
NECAP1-218ENST00000639595 NME9Q86XW9 330 aa11.08□□□□□ -0.64
NECAP1-218ENST00000639595 PRR36Q9H6K5 1346 aa11.07□□□□□ -0.64
NECAP1-218ENST00000639595 IL13P35225 146 aa11.07□□□□□ -0.64
NECAP1-218ENST00000639595 PLEKHG3A1L390 1219 aa11.07□□□□□ -0.64
NECAP1-218ENST00000639595 PAK3O75914 559 aaPredicted RBP11.07□□□□□ -0.64
NECAP1-218ENST00000639595 FBLN1P23142 703 aa11.07□□□□□ -0.64
NECAP1-218ENST00000639595 TSR2Q969E8 191 aaKnown RBP11.07□□□□□ -0.64
NECAP1-218ENST00000639595 CDK12Q9NYV4 1490 aaPredicted RBP11.06□□□□□ -0.64
NECAP1-218ENST00000639595 EXOSC9Q06265 439 aaKnown RBP11.06□□□□□ -0.64
NECAP1-218ENST00000639595 FAM161AQ3B820 660 aa11.06□□□□□ -0.64
NECAP1-218ENST00000639595 COG3Q96JB2 828 aa11.06□□□□□ -0.64
NECAP1-218ENST00000639595 ZBTB47Q9UFB7 747 aaPredicted RBP11.06□□□□□ -0.64
NECAP1-218ENST00000639595 NCKAP5LQ9HCH0 1330 aa11.06□□□□□ -0.64
NECAP1-218ENST00000639595 PRKAR2BP31323 418 aa11.06□□□□□ -0.64
NECAP1-218ENST00000639595 ZKSCAN2Q63HK3 967 aa11.06□□□□□ -0.64
NECAP1-218ENST00000639595 EMILIN1Q9Y6C2 1016 aa11.06□□□□□ -0.64
NECAP1-218ENST00000639595 ARHGAP23Q9P227 1491 aa11.06□□□□□ -0.64
NECAP1-218ENST00000639595 PMFBP1Q8TBY8 1022 aa11.05□□□□□ -0.64
NECAP1-218ENST00000639595 TBX22Q9Y458 520 aa11.05□□□□□ -0.64
NECAP1-218ENST00000639595 SLIT1O75093 1534 aa11.05□□□□□ -0.64
NECAP1-218ENST00000639595 CEBPAP49715 358 aaPredicted RBP11.05□□□□□ -0.64
NECAP1-218ENST00000639595 NFE2L2Q16236 605 aa11.05□□□□□ -0.64
NECAP1-218ENST00000639595 C8orf34Q49A92 452 aa11.05□□□□□ -0.64
NECAP1-218ENST00000639595 BCL2L13Q9BXK5 485 aa11.05□□□□□ -0.64
NECAP1-218ENST00000639595 ZRANB1Q9UGI0 708 aa11.05□□□□□ -0.64
NECAP1-218ENST00000639595 EID1Q9Y6B2 187 aa11.05□□□□□ -0.64
NECAP1-218ENST00000639595 PPM1GO15355 546 aaPredicted RBP11.04□□□□□ -0.64
NECAP1-218ENST00000639595 MVPQ14764 893 aaKnown RBP11.04□□□□□ -0.64
NECAP1-218ENST00000639595 SSH1Q8WYL5 1049 aa11.04□□□□□ -0.64
NECAP1-218ENST00000639595 ZNF428Q96B54 188 aa11.04□□□□□ -0.64
NECAP1-218ENST00000639595 TNNQ9UQP3 1299 aa11.04□□□□□ -0.64
NECAP1-218ENST00000639595 PCDHB15Q9Y5E8 787 aa11.04□□□□□ -0.64
NECAP1-218ENST00000639595 NEFMP07197 916 aa11.04□□□□□ -0.64
NECAP1-218ENST00000639595 BRPF1P55201 1214 aaPredicted RBP11.04□□□□□ -0.64
NECAP1-218ENST00000639595 PHACTR3Q96KR7 559 aa11.04□□□□□ -0.64
NECAP1-218ENST00000639595 LRRC7Q96NW7 1537 aa11.04□□□□□ -0.64
NECAP1-218ENST00000639595 MON2Q7Z3U7 1717 aa11.03□□□□□ -0.64
NECAP1-218ENST00000639595 DZIP1LQ8IYY4 767 aaKnown RBP11.03□□□□□ -0.64
NECAP1-218ENST00000639595 PTPRUQ92729 1446 aa11.03□□□□□ -0.64
NECAP1-218ENST00000639595 CALD1Q05682 793 aaKnown RBP11.03□□□□□ -0.64
NECAP1-218ENST00000639595 ALDH1L2Q3SY69 923 aa11.03□□□□□ -0.64
NECAP1-218ENST00000639595 SMC4Q9NTJ3 1288 aa11.03□□□□□ -0.64
NECAP1-218ENST00000639595 TTC21BQ7Z4L5 1316 aa11.03□□□□□ -0.64
NECAP1-218ENST00000639595 C3P01024 1663 aa11.02□□□□□ -0.65
NECAP1-218ENST00000639595 TRIM27P14373 513 aa11.02□□□□□ -0.65
NECAP1-218ENST00000639595 ATF7IPQ6VMQ6 1270 aa11.02□□□□□ -0.65
NECAP1-218ENST00000639595 THEMISQ8N1K5 641 aaPredicted RBP11.02□□□□□ -0.65
NECAP1-218ENST00000639595 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.02□□□□□ -0.65
NECAP1-218ENST00000639595 ACEP12821 1306 aa11.02□□□□□ -0.65
NECAP1-218ENST00000639595 ZNF853P0CG23 659 aa11.01□□□□□ -0.65
NECAP1-218ENST00000639595 NPM2Q86SE8 214 aaKnown RBP11.01□□□□□ -0.65
NECAP1-218ENST00000639595 SLC26A8Q96RN1 970 aa11.01□□□□□ -0.65
NECAP1-218ENST00000639595 RWDD1Q9H446 243 aaPredicted RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms