RNA–Protein interactions for RNA: ENST00000638921.1

GFAP-230, Transcript of glial fibrillary acidic protein, humanhuman

Gene GFAP, Length 2,617 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-230ENST00000638921 GGNBP2Q9H3C7 697 aa18.33■□□□□ 0.52
GFAP-230ENST00000638921 NLRP1Q9C000 1473 aa18.32■□□□□ 0.52
GFAP-230ENST00000638921 ATAD2Q6PL18 1390 aa18.32■□□□□ 0.52
GFAP-230ENST00000638921 U2SURPO15042 1029 aaKnown RBP18.32■□□□□ 0.52
GFAP-230ENST00000638921 TMPOP42166 694 aaKnown RBP18.32■□□□□ 0.52
GFAP-230ENST00000638921 FTSJ3Q8IY81 847 aaKnown RBP18.32■□□□□ 0.52
GFAP-230ENST00000638921 TERF2IPQ9NYB0 399 aa18.32■□□□□ 0.52
GFAP-230ENST00000638921 TSR2Q969E8 191 aaKnown RBP18.31■□□□□ 0.52
GFAP-230ENST00000638921 UPF2Q9HAU5 1272 aaKnown RBP18.31■□□□□ 0.52
GFAP-230ENST00000638921 FYB1O15117 783 aa18.3■□□□□ 0.52
GFAP-230ENST00000638921 TRIM35Q9UPQ4 493 aa18.3■□□□□ 0.52
GFAP-230ENST00000638921 COL3A1P02461 1466 aaPredicted RBP18.3■□□□□ 0.52
GFAP-230ENST00000638921 EXOSC9Q06265 439 aaKnown RBP18.3■□□□□ 0.52
GFAP-230ENST00000638921 VSIG10Q8N0Z9 540 aa18.3■□□□□ 0.52
GFAP-230ENST00000638921 MED14O60244 1454 aa18.29■□□□□ 0.52
GFAP-230ENST00000638921 SMC4Q9NTJ3 1288 aa18.29■□□□□ 0.52
GFAP-230ENST00000638921 PTPRMP28827 1452 aa18.29■□□□□ 0.52
GFAP-230ENST00000638921 IL16Q14005 1332 aa18.29■□□□□ 0.52
GFAP-230ENST00000638921 TBC1D32Q96NH3 1257 aa18.28■□□□□ 0.52
GFAP-230ENST00000638921 PRAM1Q96QH2 718 aa18.28■□□□□ 0.52
GFAP-230ENST00000638921 MINK1Q8N4C8 1332 aaPredicted RBP18.27■□□□□ 0.52
GFAP-230ENST00000638921 TRIM27P14373 513 aa18.27■□□□□ 0.51
GFAP-230ENST00000638921 SSH1Q8WYL5 1049 aa18.27■□□□□ 0.51
GFAP-230ENST00000638921 POGKQ9P215 609 aa18.27■□□□□ 0.51
GFAP-230ENST00000638921 YTHDC2Q9H6S0 1430 aaKnown RBP18.26■□□□□ 0.51
GFAP-230ENST00000638921 CD163L1Q9NR16 1453 aa18.26■□□□□ 0.51
GFAP-230ENST00000638921 DDX19BQ9UMR2 479 aa18.26■□□□□ 0.51
GFAP-230ENST00000638921 HDAC1Q13547 482 aaPredicted RBP18.25■□□□□ 0.51
GFAP-230ENST00000638921 ATF7IPQ6VMQ6 1270 aa18.25■□□□□ 0.51
GFAP-230ENST00000638921 PNNQ9H307 717 aaKnown RBP18.25■□□□□ 0.51
GFAP-230ENST00000638921 RRAGDQ9NQL2 400 aaPredicted RBP18.25■□□□□ 0.51
GFAP-230ENST00000638921 TMEM131LA2VDJ0 1609 aa18.25■□□□□ 0.51
GFAP-230ENST00000638921 DIAPH1O60610 1272 aaKnown RBP18.24■□□□□ 0.51
GFAP-230ENST00000638921 RIPK4P57078 832 aa18.24■□□□□ 0.51
GFAP-230ENST00000638921 HDGFL2Q7Z4V5 671 aaPredicted RBP18.24■□□□□ 0.51
GFAP-230ENST00000638921 PNPLA6Q8IY17 1366 aa18.24■□□□□ 0.51
GFAP-230ENST00000638921 YEATS2Q9ULM3 1422 aa18.24■□□□□ 0.51
GFAP-230ENST00000638921 CLTCQ00610 1675 aaKnown RBP18.23■□□□□ 0.51
GFAP-230ENST00000638921 RICTORQ6R327 1708 aa18.23■□□□□ 0.51
GFAP-230ENST00000638921 ANKRD26Q9UPS8 1709 aa18.23■□□□□ 0.51
GFAP-230ENST00000638921 ITPRIPQ8IWB1 547 aa18.22■□□□□ 0.51
GFAP-230ENST00000638921 RRP9O43818 475 aaKnown RBP18.22■□□□□ 0.51
GFAP-230ENST00000638921 NOB1Q9ULX3 412 aaKnown RBP18.22■□□□□ 0.51
GFAP-230ENST00000638921 PREX1Q8TCU6 1659 aa18.22■□□□□ 0.51
GFAP-230ENST00000638921 CDK19Q9BWU1 502 aa18.21■□□□□ 0.51
GFAP-230ENST00000638921 SLKQ9H2G2 1235 aaPredicted RBP18.21■□□□□ 0.51
GFAP-230ENST00000638921 MYO5BQ9ULV0 1848 aa18.21■□□□□ 0.51
GFAP-230ENST00000638921 ANTXR1Q9H6X2 564 aa18.2■□□□□ 0.5
GFAP-230ENST00000638921 IPO8O15397 1037 aaKnown RBP18.2■□□□□ 0.5
GFAP-230ENST00000638921 KIF16BQ96L93 1317 aa18.2■□□□□ 0.5
GFAP-230ENST00000638921 FCHSD2O94868 740 aa18.19■□□□□ 0.5
GFAP-230ENST00000638921 TBC1D2Q9BYX2 928 aa18.19■□□□□ 0.5
GFAP-230ENST00000638921 CABP1Q9NZU7 370 aa18.19■□□□□ 0.5
GFAP-230ENST00000638921 ARHGEF40Q8TER5 1519 aa18.19■□□□□ 0.5
GFAP-230ENST00000638921 SMC5Q8IY18 1101 aa18.19■□□□□ 0.5
GFAP-230ENST00000638921 HSP90AA2PQ14568 343 aaPredicted RBP18.19■□□□□ 0.5
GFAP-230ENST00000638921 TMEM57Q8N5G2 664 aa18.19■□□□□ 0.5
GFAP-230ENST00000638921 ZBTB40Q9NUA8 1239 aa18.18■□□□□ 0.5
GFAP-230ENST00000638921 ALKQ9UM73 1620 aa18.18■□□□□ 0.5
GFAP-230ENST00000638921 ALDH1L2Q3SY69 923 aa18.18■□□□□ 0.5
GFAP-230ENST00000638921 FBXO31Q5XUX0 539 aaPredicted RBP18.18■□□□□ 0.5
GFAP-230ENST00000638921 C22orf23Q9BZE7 217 aa18.15■□□□□ 0.5
GFAP-230ENST00000638921 CDC42BPGQ6DT37 1551 aa18.15■□□□□ 0.5
GFAP-230ENST00000638921 L1TD1Q5T7N2 865 aaKnown RBP18.15■□□□□ 0.5
GFAP-230ENST00000638921 ZNF428Q96B54 188 aa18.15■□□□□ 0.5
GFAP-230ENST00000638921 STAG3Q9UJ98 1225 aa18.15■□□□□ 0.5
GFAP-230ENST00000638921 PRKAR2BP31323 418 aa18.14■□□□□ 0.49
GFAP-230ENST00000638921 POLKQ9UBT6 870 aa18.14■□□□□ 0.49
GFAP-230ENST00000638921 BRPF1P55201 1214 aaPredicted RBP18.13■□□□□ 0.49
GFAP-230ENST00000638921 HSP90AA1P07900 732 aaKnown RBP18.13■□□□□ 0.49
GFAP-230ENST00000638921 MFAP1P55081 439 aaKnown RBP18.13■□□□□ 0.49
GFAP-230ENST00000638921 FAM135BQ49AJ0 1406 aa18.13■□□□□ 0.49
GFAP-230ENST00000638921 LRRC7Q96NW7 1537 aa18.12■□□□□ 0.49
GFAP-230ENST00000638921 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.12■□□□□ 0.49
GFAP-230ENST00000638921 KIF20BQ96Q89 1820 aa18.12■□□□□ 0.49
GFAP-230ENST00000638921 PPIP5K1Q6PFW1 1433 aa18.11■□□□□ 0.49
GFAP-230ENST00000638921 NAP1L5Q96NT1 182 aaPredicted RBP18.11■□□□□ 0.49
GFAP-230ENST00000638921 ATP7BP35670 1465 aa18.11■□□□□ 0.49
GFAP-230ENST00000638921 NUCB1Q02818 461 aa18.11■□□□□ 0.49
GFAP-230ENST00000638921 PODXL2Q9NZ53 605 aa18.11■□□□□ 0.49
GFAP-230ENST00000638921 FAM69CQ0P6D2 419 aa18.1■□□□□ 0.49
GFAP-230ENST00000638921 DLC1Q96QB1 1528 aa18.1■□□□□ 0.49
GFAP-230ENST00000638921 CLCN1P35523 988 aa18.1■□□□□ 0.49
GFAP-230ENST00000638921 NFE2L2Q16236 605 aa18.1■□□□□ 0.49
GFAP-230ENST00000638921 DNAJC5Q9H3Z4 198 aa18.1■□□□□ 0.49
GFAP-230ENST00000638921 FBLN1P23142 703 aa18.09■□□□□ 0.49
GFAP-230ENST00000638921 CALD1Q05682 793 aaKnown RBP18.09■□□□□ 0.49
GFAP-230ENST00000638921 WAPLQ7Z5K2 1190 aa18.09■□□□□ 0.49
GFAP-230ENST00000638921 PHACTR3Q96KR7 559 aa18.08■□□□□ 0.49
GFAP-230ENST00000638921 MLECQ14165 292 aa18.08■□□□□ 0.48
GFAP-230ENST00000638921 CHMP4BQ9H444 224 aaKnown RBP18.08■□□□□ 0.48
GFAP-230ENST00000638921 ARHGAP45Q92619 1136 aa18.07■□□□□ 0.48
GFAP-230ENST00000638921 PPP6R1Q9UPN7 881 aa18.07■□□□□ 0.48
GFAP-230ENST00000638921 VAMP4O75379 141 aa18.07■□□□□ 0.48
GFAP-230ENST00000638921 CHD1LQ86WJ1 897 aa18.07■□□□□ 0.48
GFAP-230ENST00000638921 HMOX1P09601 288 aa18.06■□□□□ 0.48
GFAP-230ENST00000638921 ZBTB7BO15156 539 aaPredicted RBP18.05■□□□□ 0.48
GFAP-230ENST00000638921 GNAI1P63096 354 aa18.05■□□□□ 0.48
GFAP-230ENST00000638921 MRPL50Q8N5N7 158 aaKnown RBP18.05■□□□□ 0.48
GFAP-230ENST00000638921 SPRYD3Q8NCJ5 442 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms