RNA–Protein interactions for RNA: ENST00000638878.1

PAX6-242, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-242ENST00000638878 PMFBP1Q8TBY8 1022 aa13.68□□□□□ -0.22
PAX6-242ENST00000638878 ATAD2Q6PL18 1390 aa13.67□□□□□ -0.22
PAX6-242ENST00000638878 NGDNQ8NEJ9 315 aaKnown RBP13.67□□□□□ -0.22
PAX6-242ENST00000638878 CABP2Q9NPB3 220 aa13.67□□□□□ -0.22
PAX6-242ENST00000638878 ITSN1Q15811 1721 aa13.66□□□□□ -0.22
PAX6-242ENST00000638878 ARHGEF10O15013 1369 aa13.65□□□□□ -0.22
PAX6-242ENST00000638878 USP47Q96K76 1375 aa13.65□□□□□ -0.22
PAX6-242ENST00000638878 ACEP12821 1306 aa13.65□□□□□ -0.22
PAX6-242ENST00000638878 CABP1Q9NZU7 370 aa13.65□□□□□ -0.22
PAX6-242ENST00000638878 DAXXQ9UER7 740 aaPredicted RBP13.65□□□□□ -0.22
PAX6-242ENST00000638878 COL22A1Q8NFW1 1626 aaPredicted RBP13.65□□□□□ -0.22
PAX6-242ENST00000638878 TOPAZ1Q8N9V7 1692 aa13.64□□□□□ -0.23
PAX6-242ENST00000638878 CDCA8Q53HL2 280 aa13.64□□□□□ -0.23
PAX6-242ENST00000638878 TNS3Q68CZ2 1445 aa13.64□□□□□ -0.23
PAX6-242ENST00000638878 PPIP5K1Q6PFW1 1433 aa13.64□□□□□ -0.23
PAX6-242ENST00000638878 NINLQ9Y2I6 1382 aa13.63□□□□□ -0.23
PAX6-242ENST00000638878 TMF1P82094 1093 aa13.62□□□□□ -0.23
PAX6-242ENST00000638878 XPCQ01831 940 aaPredicted RBP13.62□□□□□ -0.23
PAX6-242ENST00000638878 CPSF1Q10570 1443 aaKnown RBP13.61□□□□□ -0.23
PAX6-242ENST00000638878 HAP1P54257 671 aaPredicted RBP13.61□□□□□ -0.23
PAX6-242ENST00000638878 EIF4G2P78344 907 aaKnown RBP eCLIP13.61□□□□□ -0.23
PAX6-242ENST00000638878 SSH2Q76I76 1423 aa13.6□□□□□ -0.23
PAX6-242ENST00000638878 TRPM3Q9HCF6 1732 aaPredicted RBP13.6□□□□□ -0.23
PAX6-242ENST00000638878 ZNF772Q68DY9 489 aaPredicted RBP13.59□□□□□ -0.23
PAX6-242ENST00000638878 FNBP4Q8N3X1 1017 aaPredicted RBP13.59□□□□□ -0.23
PAX6-242ENST00000638878 LRP6O75581 1613 aa13.59□□□□□ -0.23
PAX6-242ENST00000638878 CCER2I3L3R5 266 aa13.58□□□□□ -0.23
PAX6-242ENST00000638878 TERF2IPQ9NYB0 399 aa13.58□□□□□ -0.23
PAX6-242ENST00000638878 USP6P35125 1406 aa13.58□□□□□ -0.24
PAX6-242ENST00000638878 NUTM2BA6NNL0 878 aaPredicted RBP13.58□□□□□ -0.24
PAX6-242ENST00000638878 NUTM2EB1AL46 878 aaPredicted RBP13.58□□□□□ -0.24
PAX6-242ENST00000638878 MEX3CQ5U5Q3 659 aaKnown RBP13.58□□□□□ -0.24
PAX6-242ENST00000638878 NUTM2AQ8IVF1 878 aaPredicted RBP13.58□□□□□ -0.24
PAX6-242ENST00000638878 ALS2Q96Q42 1657 aa13.57□□□□□ -0.24
PAX6-242ENST00000638878 TTC21AQ8NDW8 1320 aa13.57□□□□□ -0.24
PAX6-242ENST00000638878 PAK3O75914 559 aaPredicted RBP13.57□□□□□ -0.24
PAX6-242ENST00000638878 NLRP13Q86W25 1043 aa13.57□□□□□ -0.24
PAX6-242ENST00000638878 SLC12A5Q9H2X9 1139 aa13.57□□□□□ -0.24
PAX6-242ENST00000638878 HDGFL2Q7Z4V5 671 aaPredicted RBP13.56□□□□□ -0.24
PAX6-242ENST00000638878 ABTB2Q8N961 1025 aa13.56□□□□□ -0.24
PAX6-242ENST00000638878 TSHZ2Q9NRE2 1034 aa13.56□□□□□ -0.24
PAX6-242ENST00000638878 LMOD2Q6P5Q4 547 aa13.55□□□□□ -0.24
PAX6-242ENST00000638878 NGLY1Q96IV0 654 aa13.55□□□□□ -0.24
PAX6-242ENST00000638878 KTN1Q86UP2 1357 aaKnown RBP13.54□□□□□ -0.24
PAX6-242ENST00000638878 HSPA5P11021 654 aaKnown RBP13.54□□□□□ -0.24
PAX6-242ENST00000638878 CD163L1Q9NR16 1453 aa13.54□□□□□ -0.24
PAX6-242ENST00000638878 USP19O94966 1318 aa13.54□□□□□ -0.24
PAX6-242ENST00000638878 TTC21BQ7Z4L5 1316 aa13.54□□□□□ -0.24
PAX6-242ENST00000638878 ADAMTS2O95450 1211 aa13.53□□□□□ -0.24
PAX6-242ENST00000638878 TMC1Q8TDI8 760 aa13.53□□□□□ -0.24
PAX6-242ENST00000638878 C8orf37Q96NL8 207 aa13.53□□□□□ -0.24
PAX6-242ENST00000638878 CABLES1Q8TDN4 633 aa13.52□□□□□ -0.25
PAX6-242ENST00000638878 AFF2P51816 1311 aa13.52□□□□□ -0.25
PAX6-242ENST00000638878 EDC4Q6P2E9 1401 aaKnown RBP13.52□□□□□ -0.25
PAX6-242ENST00000638878 FAM83GA6ND36 823 aa13.51□□□□□ -0.25
PAX6-242ENST00000638878 GCP02774 474 aa13.51□□□□□ -0.25
PAX6-242ENST00000638878 NLRP6P59044 892 aa13.51□□□□□ -0.25
PAX6-242ENST00000638878 TPRNQ4KMQ1 711 aa13.51□□□□□ -0.25
PAX6-242ENST00000638878 KCNH5Q8NCM2 988 aa13.51□□□□□ -0.25
PAX6-242ENST00000638878 CPDO75976 1380 aa13.51□□□□□ -0.25
PAX6-242ENST00000638878 USP31Q70CQ4 1352 aa13.51□□□□□ -0.25
PAX6-242ENST00000638878 ANKRD36BQ8N2N9 1353 aa13.51□□□□□ -0.25
PAX6-242ENST00000638878 AKAP12Q02952 1782 aa13.51□□□□□ -0.25
PAX6-242ENST00000638878 SLIT2O94813 1529 aa13.51□□□□□ -0.25
PAX6-242ENST00000638878 ATXN8OSP0DMR3 200 aa13.5□□□□□ -0.25
PAX6-242ENST00000638878 UPF1Q92900 1129 aaKnown RBP eCLIP13.5□□□□□ -0.25
PAX6-242ENST00000638878 USP21Q9UK80 565 aa13.5□□□□□ -0.25
PAX6-242ENST00000638878 BCL9LQ86UU0 1499 aa13.5□□□□□ -0.25
PAX6-242ENST00000638878 MARF1Q9Y4F3 1742 aaKnown RBP13.5□□□□□ -0.25
PAX6-242ENST00000638878 UNC5CLQ8IV45 518 aa13.49□□□□□ -0.25
PAX6-242ENST00000638878 ANP32EQ9BTT0 268 aa13.49□□□□□ -0.25
PAX6-242ENST00000638878 QTRT2Q9H974 415 aaKnown RBP13.49□□□□□ -0.25
PAX6-242ENST00000638878 TRPC5Q9UL62 973 aaPredicted RBP13.49□□□□□ -0.25
PAX6-242ENST00000638878 A0A1W2PP64 1363 aa13.49□□□□□ -0.25
PAX6-242ENST00000638878 MON2Q7Z3U7 1717 aa13.47□□□□□ -0.25
PAX6-242ENST00000638878 CRYBG1Q9Y4K1 1723 aa13.47□□□□□ -0.25
PAX6-242ENST00000638878 NEFLP07196 543 aa13.47□□□□□ -0.25
PAX6-242ENST00000638878 RXRBP28702 533 aa13.47□□□□□ -0.25
PAX6-242ENST00000638878 RBM6P78332 1123 aaKnown RBP13.47□□□□□ -0.25
PAX6-242ENST00000638878 VSIG10Q8N0Z9 540 aa13.47□□□□□ -0.25
PAX6-242ENST00000638878 NRKQ7Z2Y5 1582 aa13.47□□□□□ -0.25
PAX6-242ENST00000638878 CDK12Q9NYV4 1490 aaPredicted RBP13.47□□□□□ -0.25
PAX6-242ENST00000638878 POTEDQ86YR6 584 aa13.46□□□□□ -0.25
PAX6-242ENST00000638878 ABCA3Q99758 1704 aa13.46□□□□□ -0.25
PAX6-242ENST00000638878 SLIT3O75094 1523 aa13.46□□□□□ -0.25
PAX6-242ENST00000638878 ANP32CO43423 234 aa13.45□□□□□ -0.26
PAX6-242ENST00000638878 ONECUT3O60422 494 aaPredicted RBP13.45□□□□□ -0.26
PAX6-242ENST00000638878 ATRNO75882 1429 aa13.45□□□□□ -0.26
PAX6-242ENST00000638878 NWD2Q9ULI1 1742 aa13.45□□□□□ -0.26
PAX6-242ENST00000638878 C11orf95C9JLR9 678 aaPredicted RBP13.45□□□□□ -0.26
PAX6-242ENST00000638878 VPS72Q15906 364 aa13.45□□□□□ -0.26
PAX6-242ENST00000638878 NUTM2GQ5VZR2 741 aa13.45□□□□□ -0.26
PAX6-242ENST00000638878 GJD4Q96KN9 370 aaPredicted RBP13.45□□□□□ -0.26
PAX6-242ENST00000638878 PRDM11Q9NQV5 511 aa13.45□□□□□ -0.26
PAX6-242ENST00000638878 COL14A1Q05707 1796 aaKnown RBP13.44□□□□□ -0.26
PAX6-242ENST00000638878 AATKQ6ZMQ8 1374 aa13.44□□□□□ -0.26
PAX6-242ENST00000638878 KIAA0232Q92628 1395 aa13.44□□□□□ -0.26
PAX6-242ENST00000638878 PIK3C2AO00443 1686 aa13.44□□□□□ -0.26
PAX6-242ENST00000638878 USP54Q70EL1 1684 aa13.44□□□□□ -0.26
PAX6-242ENST00000638878 FYB1O15117 783 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms