RNA–Protein interactions for RNA: ENST00000637007.1

CACNB4-240, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, human

TSL 5

Gene CACNB4, Length 858 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB4-240	ENST00000637007	ANKAR	Q7Z5J8	1434 aa		11.53	□□□□□ -0.56
CACNB4-240	ENST00000637007	MON2	Q7Z3U7	1717 aa		11.53	□□□□□ -0.56
CACNB4-240	ENST00000637007	MKRN4P	Q13434	485 aa	Predicted RBP	11.53	□□□□□ -0.56
CACNB4-240	ENST00000637007	C14orf37	Q86TY3	774 aa		11.53	□□□□□ -0.56
CACNB4-240	ENST00000637007	PROSER2	Q86WR7	435 aa	Predicted RBP	11.53	□□□□□ -0.56
CACNB4-240	ENST00000637007	OTUD5	Q96G74	571 aa		11.53	□□□□□ -0.56
CACNB4-240	ENST00000637007	FARP1	Q9Y4F1	1045 aa	Predicted RBP	11.53	□□□□□ -0.56
CACNB4-240	ENST00000637007	KTN1	Q86UP2	1357 aa	Known RBP	11.53	□□□□□ -0.56
CACNB4-240	ENST00000637007	PPIP5K1	Q6PFW1	1433 aa		11.52	□□□□□ -0.56
CACNB4-240	ENST00000637007	ANKRD26	Q9UPS8	1709 aa		11.52	□□□□□ -0.56
CACNB4-240	ENST00000637007	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	11.52	□□□□□ -0.57
CACNB4-240	ENST00000637007	TERF2IP	Q9NYB0	399 aa		11.52	□□□□□ -0.57
CACNB4-240	ENST00000637007	NSD3	Q9BZ95	1437 aa		11.52	□□□□□ -0.57
CACNB4-240	ENST00000637007	NCOA3	Q9Y6Q9	1424 aa		11.52	□□□□□ -0.57
CACNB4-240	ENST00000637007	XIRP1	Q702N8	1843 aa	Known RBP	11.51	□□□□□ -0.57
CACNB4-240	ENST00000637007	NUDT16	Q96DE0	195 aa	Known RBP	11.51	□□□□□ -0.57
CACNB4-240	ENST00000637007	SLC12A5	Q9H2X9	1139 aa		11.51	□□□□□ -0.57
CACNB4-240	ENST00000637007	PCDH10	Q9P2E7	1040 aa		11.51	□□□□□ -0.57
CACNB4-240	ENST00000637007	PRKRIP1	Q9H875	184 aa	Predicted RBP	11.49	□□□□□ -0.57
CACNB4-240	ENST00000637007	CCDC61	Q9Y6R9	512 aa		11.49	□□□□□ -0.57
CACNB4-240	ENST00000637007		A0A1W2PP64	1363 aa		11.49	□□□□□ -0.57
CACNB4-240	ENST00000637007	TMEM94	Q12767	1356 aa		11.49	□□□□□ -0.57
CACNB4-240	ENST00000637007	NPC1L1	Q9UHC9	1359 aa		11.49	□□□□□ -0.57
CACNB4-240	ENST00000637007	DCC	P43146	1447 aa		11.49	□□□□□ -0.57
CACNB4-240	ENST00000637007	KIF1A	Q12756	1690 aa		11.49	□□□□□ -0.57
CACNB4-240	ENST00000637007	CCER2	I3L3R5	266 aa		11.48	□□□□□ -0.57
CACNB4-240	ENST00000637007	PER1	O15534	1290 aa	Predicted RBP	11.48	□□□□□ -0.57
CACNB4-240	ENST00000637007	RALBP1	Q15311	655 aa		11.48	□□□□□ -0.57
CACNB4-240	ENST00000637007	POTEG	Q6S5H5	508 aa		11.48	□□□□□ -0.57
CACNB4-240	ENST00000637007	CABP1	Q9NZU7	370 aa		11.48	□□□□□ -0.57
CACNB4-240	ENST00000637007	PRR36	Q9H6K5	1346 aa		11.48	□□□□□ -0.57
CACNB4-240	ENST00000637007	NSD2	O96028	1365 aa		11.48	□□□□□ -0.57
CACNB4-240	ENST00000637007	CD163L1	Q9NR16	1453 aa		11.48	□□□□□ -0.57
CACNB4-240	ENST00000637007	LRRC7	Q96NW7	1537 aa		11.47	□□□□□ -0.57
CACNB4-240	ENST00000637007	MSH6	P52701	1360 aa		11.47	□□□□□ -0.57
CACNB4-240	ENST00000637007	PARD3	Q8TEW0	1356 aa		11.47	□□□□□ -0.57
CACNB4-240	ENST00000637007	CGNL1	Q0VF96	1302 aa		11.47	□□□□□ -0.57
CACNB4-240	ENST00000637007	CNGB1	Q14028	1251 aa	Predicted RBP	11.47	□□□□□ -0.57
CACNB4-240	ENST00000637007	NRK	Q7Z2Y5	1582 aa		11.46	□□□□□ -0.57
CACNB4-240	ENST00000637007	EDC4	Q6P2E9	1401 aa	Known RBP	11.46	□□□□□ -0.57
CACNB4-240	ENST00000637007	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	11.46	□□□□□ -0.57
CACNB4-240	ENST00000637007	NUTM2F	A1L443	756 aa		11.46	□□□□□ -0.57
CACNB4-240	ENST00000637007	CPSF1	Q10570	1443 aa	Known RBP	11.45	□□□□□ -0.58
CACNB4-240	ENST00000637007	MYBBP1A	Q9BQG0	1328 aa	Known RBP	11.45	□□□□□ -0.58
CACNB4-240	ENST00000637007	AMER1	Q5JTC6	1135 aa	Predicted RBP	11.45	□□□□□ -0.58
CACNB4-240	ENST00000637007	CC2D1B	Q5T0F9	858 aa	Known RBP	11.45	□□□□□ -0.58
CACNB4-240	ENST00000637007	ZNF579	Q8NAF0	562 aa	Known RBP	11.45	□□□□□ -0.58
CACNB4-240	ENST00000637007	RBM33	Q96EV2	1170 aa	Known RBP	11.45	□□□□□ -0.58
CACNB4-240	ENST00000637007	CARD14	Q9BXL6	1004 aa		11.45	□□□□□ -0.58
CACNB4-240	ENST00000637007	C19orf44	Q9H6X5	657 aa		11.45	□□□□□ -0.58
CACNB4-240	ENST00000637007	PLEKHG3	A1L390	1219 aa		11.44	□□□□□ -0.58
CACNB4-240	ENST00000637007	ATF3	P18847	181 aa		11.44	□□□□□ -0.58
CACNB4-240	ENST00000637007	NGDN	Q8NEJ9	315 aa	Known RBP	11.43	□□□□□ -0.58
CACNB4-240	ENST00000637007	USP6	P35125	1406 aa		11.43	□□□□□ -0.58
CACNB4-240	ENST00000637007	POLR3A	O14802	1390 aa	Predicted RBP	11.42	□□□□□ -0.58
CACNB4-240	ENST00000637007	ACE	P12821	1306 aa		11.42	□□□□□ -0.58
CACNB4-240	ENST00000637007	CADPS2	Q86UW7	1296 aa		11.42	□□□□□ -0.58
CACNB4-240	ENST00000637007	C1orf167	Q5SNV9	1468 aa		11.42	□□□□□ -0.58
CACNB4-240	ENST00000637007	MORC1	Q86VD1	984 aa		11.41	□□□□□ -0.58
CACNB4-240	ENST00000637007	PHF8	Q9UPP1	1060 aa		11.41	□□□□□ -0.58
CACNB4-240	ENST00000637007	MST1R	Q04912	1400 aa		11.41	□□□□□ -0.58
CACNB4-240	ENST00000637007	BRD4	O60885	1362 aa	Predicted RBP	11.41	□□□□□ -0.58
CACNB4-240	ENST00000637007	ESCO1	Q5FWF5	840 aa		11.4	□□□□□ -0.58
CACNB4-240	ENST00000637007	NLRP13	Q86W25	1043 aa		11.4	□□□□□ -0.58
CACNB4-240	ENST00000637007	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	11.4	□□□□□ -0.58
CACNB4-240	ENST00000637007	PMFBP1	Q8TBY8	1022 aa		11.4	□□□□□ -0.58
CACNB4-240	ENST00000637007	MRS2	Q9HD23	443 aa		11.4	□□□□□ -0.58
CACNB4-240	ENST00000637007	USP54	Q70EL1	1684 aa		11.4	□□□□□ -0.59
CACNB4-240	ENST00000637007	TTC21A	Q8NDW8	1320 aa		11.39	□□□□□ -0.59
CACNB4-240	ENST00000637007	LTBP4	Q8N2S1	1624 aa		11.39	□□□□□ -0.59
CACNB4-240	ENST00000637007	POTEB2	H3BUK9	544 aa		11.39	□□□□□ -0.59
CACNB4-240	ENST00000637007	TTC21B	Q7Z4L5	1316 aa		11.38	□□□□□ -0.59
CACNB4-240	ENST00000637007	MAP2	P11137	1827 aa	Known RBP	11.38	□□□□□ -0.59
CACNB4-240	ENST00000637007	PIK3C2A	O00443	1686 aa		11.38	□□□□□ -0.59
CACNB4-240	ENST00000637007	GGNBP2	Q9H3C7	697 aa		11.37	□□□□□ -0.59
CACNB4-240	ENST00000637007	TRPM3	Q9HCF6	1732 aa	Predicted RBP	11.37	□□□□□ -0.59
CACNB4-240	ENST00000637007	SSH2	Q76I76	1423 aa		11.36	□□□□□ -0.59
CACNB4-240	ENST00000637007	FYB1	O15117	783 aa		11.36	□□□□□ -0.59
CACNB4-240	ENST00000637007	ZBTB22	O15209	634 aa		11.36	□□□□□ -0.59
CACNB4-240	ENST00000637007	PPP2R1A	P30153	589 aa		11.36	□□□□□ -0.59
CACNB4-240	ENST00000637007	COG3	Q96JB2	828 aa		11.36	□□□□□ -0.59
CACNB4-240	ENST00000637007	PSME1	Q06323	249 aa		11.35	□□□□□ -0.59
CACNB4-240	ENST00000637007	NME9	Q86XW9	330 aa		11.35	□□□□□ -0.59
CACNB4-240	ENST00000637007	ORAI2	Q96SN7	254 aa		11.35	□□□□□ -0.59
CACNB4-240	ENST00000637007	ZRANB1	Q9UGI0	708 aa		11.35	□□□□□ -0.59
CACNB4-240	ENST00000637007	MARF1	Q9Y4F3	1742 aa	Known RBP	11.35	□□□□□ -0.59
CACNB4-240	ENST00000637007	OVOS2	A0A0J9YW53	1432 aa		11.34	□□□□□ -0.59
CACNB4-240	ENST00000637007	OVOS2	Q6IE36	1432 aa		11.34	□□□□□ -0.59
CACNB4-240	ENST00000637007	USP31	Q70CQ4	1352 aa		11.33	□□□□□ -0.6
CACNB4-240	ENST00000637007	PAK3	O75914	559 aa	Predicted RBP	11.33	□□□□□ -0.6
CACNB4-240	ENST00000637007	TNNT2	P45379	298 aa	Predicted RBP	11.33	□□□□□ -0.6
CACNB4-240	ENST00000637007	CFAP53	Q96M91	514 aa		11.33	□□□□□ -0.6
CACNB4-240	ENST00000637007	NHSL1	Q5SYE7	1610 aa		11.33	□□□□□ -0.6
CACNB4-240	ENST00000637007	ALS2	Q96Q42	1657 aa		11.33	□□□□□ -0.6
CACNB4-240	ENST00000637007	NPHP3	Q7Z494	1330 aa		11.33	□□□□□ -0.6
CACNB4-240	ENST00000637007	GALR2	O43603	387 aa	Predicted RBP	11.32	□□□□□ -0.6
CACNB4-240	ENST00000637007	CCDC184	Q52MB2	194 aa		11.32	□□□□□ -0.6
CACNB4-240	ENST00000637007	YTHDC1	Q96MU7	727 aa	Known RBP	11.32	□□□□□ -0.6
CACNB4-240	ENST00000637007	AATK	Q6ZMQ8	1374 aa		11.31	□□□□□ -0.6
CACNB4-240	ENST00000637007	FOXO3	O43524	673 aa		11.31	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms