RNA–Protein interactions for RNA: ENST00000636861.1

CHD2-225, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 146 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-225ENST00000636861 CACNA1GO43497 2377 aa5.39□□□□□ -1.55
CHD2-225ENST00000636861 TRIOBPQ9H2D6 2365 aa5.39□□□□□ -1.55
CHD2-225ENST00000636861 ADAMTS7Q9UKP4 1686 aa5.39□□□□□ -1.55
CHD2-225ENST00000636861 RANBP2P49792 3224 aaKnown RBP5.39□□□□□ -1.55
CHD2-225ENST00000636861 MEGF6O75095 1541 aa5.38□□□□□ -1.55
CHD2-225ENST00000636861 COL24A1Q17RW2 1714 aa5.38□□□□□ -1.55
CHD2-225ENST00000636861 RGPD3A6NKT7 1758 aaPredicted RBP5.38□□□□□ -1.55
CHD2-225ENST00000636861 RGPD4Q7Z3J3 1758 aa5.38□□□□□ -1.55
CHD2-225ENST00000636861 FAM98CQ17RN3 349 aaKnown RBP5.38□□□□□ -1.55
CHD2-225ENST00000636861 C14orf37Q86TY3 774 aa5.38□□□□□ -1.55
CHD2-225ENST00000636861 ARXQ96QS3 562 aa5.38□□□□□ -1.55
CHD2-225ENST00000636861 DHX57Q6P158 1386 aaKnown RBP5.38□□□□□ -1.55
CHD2-225ENST00000636861 DCCP43146 1447 aa5.38□□□□□ -1.55
CHD2-225ENST00000636861 NEXMIFQ5QGS0 1516 aa5.38□□□□□ -1.55
CHD2-225ENST00000636861 ANP32CO43423 234 aa5.37□□□□□ -1.55
CHD2-225ENST00000636861 NCLP19338 710 aaKnown RBP5.37□□□□□ -1.55
CHD2-225ENST00000636861 VSIG10Q8N0Z9 540 aa5.37□□□□□ -1.55
CHD2-225ENST00000636861 DDRGK1Q96HY6 314 aa5.37□□□□□ -1.55
CHD2-225ENST00000636861 SPAG9O60271 1321 aaKnown RBP5.37□□□□□ -1.55
CHD2-225ENST00000636861 CDC42BPAQ5VT25 1732 aa5.37□□□□□ -1.55
CHD2-225ENST00000636861 ZMYND15Q9H091 742 aa5.36□□□□□ -1.55
CHD2-225ENST00000636861 EID1Q9Y6B2 187 aa5.36□□□□□ -1.55
CHD2-225ENST00000636861 TULP4Q9NRJ4 1543 aa5.36□□□□□ -1.55
CHD2-225ENST00000636861 CICQ96RK0 1608 aaPredicted RBP5.36□□□□□ -1.55
CHD2-225ENST00000636861 PTPN23Q9H3S7 1636 aa5.36□□□□□ -1.55
CHD2-225ENST00000636861 NALCNQ8IZF0 1738 aa5.36□□□□□ -1.55
CHD2-225ENST00000636861 ABCA3Q99758 1704 aa5.36□□□□□ -1.55
CHD2-225ENST00000636861 TRPM2O94759 1503 aa5.35□□□□□ -1.55
CHD2-225ENST00000636861 A0A0G2JS52 829 aa5.35□□□□□ -1.55
CHD2-225ENST00000636861 PLEKHG5O94827 1062 aa5.35□□□□□ -1.55
CHD2-225ENST00000636861 ITGAEP38570 1179 aa5.35□□□□□ -1.55
CHD2-225ENST00000636861 FXR1P51114 621 aaKnown RBP eCLIP5.35□□□□□ -1.55
CHD2-225ENST00000636861 PDE4CQ08493 712 aa5.35□□□□□ -1.55
CHD2-225ENST00000636861 HABP4Q5JVS0 413 aaKnown RBP5.35□□□□□ -1.55
CHD2-225ENST00000636861 NMRK2Q9NPI5 230 aa5.35□□□□□ -1.55
CHD2-225ENST00000636861 RTN4Q9NQC3 1192 aaKnown RBP5.35□□□□□ -1.55
CHD2-225ENST00000636861 EHBP1L1Q8N3D4 1523 aa5.34□□□□□ -1.55
CHD2-225ENST00000636861 LAMA3Q16787 3333 aa5.34□□□□□ -1.55
CHD2-225ENST00000636861 LAMA2P24043 3122 aaKnown RBP5.34□□□□□ -1.55
CHD2-225ENST00000636861 HSP90AA1P07900 732 aaKnown RBP5.34□□□□□ -1.55
CHD2-225ENST00000636861 HSP90AA2PQ14568 343 aaPredicted RBP5.34□□□□□ -1.55
CHD2-225ENST00000636861 GSE1Q14687 1217 aa5.34□□□□□ -1.55
CHD2-225ENST00000636861 RBM46Q8TBY0 533 aaKnown RBP5.34□□□□□ -1.55
CHD2-225ENST00000636861 MTFR1LQ9H019 292 aa5.34□□□□□ -1.55
CHD2-225ENST00000636861 SBF2Q86WG5 1849 aa5.34□□□□□ -1.55
CHD2-225ENST00000636861 CEP152O94986 1710 aa5.34□□□□□ -1.56
CHD2-225ENST00000636861 PXDNQ92626 1479 aa5.33□□□□□ -1.56
CHD2-225ENST00000636861 NOS1P29475 1434 aa5.33□□□□□ -1.56
CHD2-225ENST00000636861 PRAG1Q86YV5 1406 aa5.33□□□□□ -1.56
CHD2-225ENST00000636861 PTPRUQ92729 1446 aa5.33□□□□□ -1.56
CHD2-225ENST00000636861 ADGRL3Q9HAR2 1447 aa5.33□□□□□ -1.56
CHD2-225ENST00000636861 VIRMAQ69YN4 1812 aaKnown RBP5.33□□□□□ -1.56
CHD2-225ENST00000636861 GRIN3BO60391 1043 aa5.33□□□□□ -1.56
CHD2-225ENST00000636861 CHGAP10645 457 aaKnown RBP5.33□□□□□ -1.56
CHD2-225ENST00000636861 PDIA4P13667 645 aaKnown RBP5.33□□□□□ -1.56
CHD2-225ENST00000636861 LBX1P52954 281 aa5.33□□□□□ -1.56
CHD2-225ENST00000636861 SLC17A8Q8NDX2 589 aa5.33□□□□□ -1.56
CHD2-225ENST00000636861 TIMELESSQ9UNS1 1208 aa5.33□□□□□ -1.56
CHD2-225ENST00000636861 C1orf167Q5SNV9 1468 aa5.32□□□□□ -1.56
CHD2-225ENST00000636861 MYO5BQ9ULV0 1848 aa5.32□□□□□ -1.56
CHD2-225ENST00000636861 CENPJQ9HC77 1338 aaPredicted RBP5.32□□□□□ -1.56
CHD2-225ENST00000636861 TAF7LQ5H9L4 462 aa5.32□□□□□ -1.56
CHD2-225ENST00000636861 L1TD1Q5T7N2 865 aaKnown RBP5.32□□□□□ -1.56
CHD2-225ENST00000636861 PROM2Q8N271 834 aa5.32□□□□□ -1.56
CHD2-225ENST00000636861 CCDC9Q9Y3X0 531 aaKnown RBP5.32□□□□□ -1.56
CHD2-225ENST00000636861 CEP290O15078 2479 aa5.32□□□□□ -1.56
CHD2-225ENST00000636861 TTC28Q96AY4 2481 aa5.31□□□□□ -1.56
CHD2-225ENST00000636861 PPP1R15AO75807 674 aaPredicted RBP5.31□□□□□ -1.56
CHD2-225ENST00000636861 FGD1P98174 961 aa5.31□□□□□ -1.56
CHD2-225ENST00000636861 KLHL34Q8N239 644 aa5.31□□□□□ -1.56
CHD2-225ENST00000636861 XRN1Q8IZH2 1706 aaKnown RBP5.31□□□□□ -1.56
CHD2-225ENST00000636861 LRRIQ1Q96JM4 1722 aa5.31□□□□□ -1.56
CHD2-225ENST00000636861 VPS8Q8N3P4 1428 aa5.31□□□□□ -1.56
CHD2-225ENST00000636861 DHX29Q7Z478 1369 aaKnown RBP5.3□□□□□ -1.56
CHD2-225ENST00000636861 LMTK2Q8IWU2 1503 aa5.3□□□□□ -1.56
CHD2-225ENST00000636861 KIF3BO15066 747 aa5.3□□□□□ -1.56
CHD2-225ENST00000636861 CTCFP49711 727 aaPredicted RBP5.3□□□□□ -1.56
CHD2-225ENST00000636861 CALD1Q05682 793 aaKnown RBP5.3□□□□□ -1.56
CHD2-225ENST00000636861 FSTL1Q12841 308 aa5.3□□□□□ -1.56
CHD2-225ENST00000636861 NCBP3Q53F19 620 aaKnown RBP5.3□□□□□ -1.56
CHD2-225ENST00000636861 FAM196AQ6ZSG2 479 aa5.3□□□□□ -1.56
CHD2-225ENST00000636861 ORAI2Q96SN7 254 aa5.3□□□□□ -1.56
CHD2-225ENST00000636861 PIEZO1Q92508 2521 aa5.3□□□□□ -1.56
CHD2-225ENST00000636861 ADAMTS13Q76LX8 1427 aa5.3□□□□□ -1.56
CHD2-225ENST00000636861 HSPA8P11142 646 aaKnown RBP5.29□□□□□ -1.56
CHD2-225ENST00000636861 AAMPQ13685 434 aa5.29□□□□□ -1.56
CHD2-225ENST00000636861 SNX27Q96L92 541 aa5.29□□□□□ -1.56
CHD2-225ENST00000636861 CFAP44Q96MT7 982 aa5.29□□□□□ -1.56
CHD2-225ENST00000636861 MAP7D2Q96T17 732 aa5.29□□□□□ -1.56
CHD2-225ENST00000636861 EYSQ5T1H1 3165 aa5.29□□□□□ -1.56
CHD2-225ENST00000636861 TROQ12816 1431 aaPredicted RBP5.29□□□□□ -1.56
CHD2-225ENST00000636861 TOPAZ1Q8N9V7 1692 aa5.28□□□□□ -1.56
CHD2-225ENST00000636861 CASP8AP2Q9UKL3 1982 aa5.28□□□□□ -1.56
CHD2-225ENST00000636861 TPM2P07951 284 aa5.28□□□□□ -1.56
CHD2-225ENST00000636861 PTF1AQ7RTS3 328 aa5.28□□□□□ -1.56
CHD2-225ENST00000636861 PNNQ9H307 717 aaKnown RBP5.28□□□□□ -1.56
CHD2-225ENST00000636861 RAPGEFL1Q9UHV5 662 aa5.28□□□□□ -1.56
CHD2-225ENST00000636861 ZFYVE9O95405 1425 aa5.28□□□□□ -1.56
CHD2-225ENST00000636861 CENPFP49454 3210 aa5.28□□□□□ -1.56
CHD2-225ENST00000636861 PEAK1Q9H792 1746 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms