RNA–Protein interactions for RNA: ENST00000636571.1

CTSD-207, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,790 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-207ENST00000636571 ILDR1Q86SU0 546 aaPredicted RBP21.45■■□□□ 1.02
CTSD-207ENST00000636571 SSH2Q76I76 1423 aa21.45■■□□□ 1.02
CTSD-207ENST00000636571 PLEKHG5O94827 1062 aa21.44■■□□□ 1.02
CTSD-207ENST00000636571 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.44■■□□□ 1.02
CTSD-207ENST00000636571 ALS2Q96Q42 1657 aa21.44■■□□□ 1.02
CTSD-207ENST00000636571 ZNF692Q9BU19 519 aaPredicted RBP21.43■■□□□ 1.02
CTSD-207ENST00000636571 SPATA31A3Q5VYP0 1347 aa21.43■■□□□ 1.02
CTSD-207ENST00000636571 NUTM2GQ5VZR2 741 aa21.43■■□□□ 1.02
CTSD-207ENST00000636571 LMOD2Q6P5Q4 547 aa21.43■■□□□ 1.02
CTSD-207ENST00000636571 TNS3Q68CZ2 1445 aa21.42■■□□□ 1.02
CTSD-207ENST00000636571 SBNO1A3KN83 1393 aa21.41■■□□□ 1.02
CTSD-207ENST00000636571 TTC21BQ7Z4L5 1316 aa21.41■■□□□ 1.02
CTSD-207ENST00000636571 PIK3C2AO00443 1686 aa21.41■■□□□ 1.02
CTSD-207ENST00000636571 NSD3Q9BZ95 1437 aa21.41■■□□□ 1.02
CTSD-207ENST00000636571 ZRANB1Q9UGI0 708 aa21.41■■□□□ 1.02
CTSD-207ENST00000636571 EDC4Q6P2E9 1401 aaKnown RBP21.4■■□□□ 1.02
CTSD-207ENST00000636571 LRRC59Q96AG4 307 aaKnown RBP21.4■■□□□ 1.02
CTSD-207ENST00000636571 NME9Q86XW9 330 aa21.39■■□□□ 1.01
CTSD-207ENST00000636571 PNPLA6Q8IY17 1366 aa21.38■■□□□ 1.01
CTSD-207ENST00000636571 DDX10Q13206 875 aaKnown RBP21.38■■□□□ 1.01
CTSD-207ENST00000636571 ABTB2Q8N961 1025 aa21.38■■□□□ 1.01
CTSD-207ENST00000636571 MARF1Q9Y4F3 1742 aaKnown RBP21.38■■□□□ 1.01
CTSD-207ENST00000636571 CABLES1Q8TDN4 633 aa21.36■■□□□ 1.01
CTSD-207ENST00000636571 SHPRHQ149N8 1683 aa21.36■■□□□ 1.01
CTSD-207ENST00000636571 KIF20BQ96Q89 1820 aa21.35■■□□□ 1.01
CTSD-207ENST00000636571 JCADQ9P266 1359 aa21.34■■□□□ 1.01
CTSD-207ENST00000636571 MED1Q15648 1581 aaPredicted RBP21.34■■□□□ 1.01
CTSD-207ENST00000636571 PER1O15534 1290 aaPredicted RBP21.33■■□□□ 1.01
CTSD-207ENST00000636571 CRYBG1Q9Y4K1 1723 aa21.33■■□□□ 1.01
CTSD-207ENST00000636571 COL22A1Q8NFW1 1626 aaPredicted RBP21.33■■□□□ 1.01
CTSD-207ENST00000636571 TTC21AQ8NDW8 1320 aa21.33■■□□□ 1.01
CTSD-207ENST00000636571 ARHGEF10O15013 1369 aa21.33■■□□□ 1
CTSD-207ENST00000636571 BRD4O60885 1362 aaPredicted RBP21.33■■□□□ 1
CTSD-207ENST00000636571 ABCA3Q99758 1704 aa21.33■■□□□ 1
CTSD-207ENST00000636571 GGNBP2Q9H3C7 697 aa21.33■■□□□ 1
CTSD-207ENST00000636571 FYB1O15117 783 aa21.32■■□□□ 1
CTSD-207ENST00000636571 NLRP6P59044 892 aa21.32■■□□□ 1
CTSD-207ENST00000636571 CNGB1Q14028 1251 aaPredicted RBP21.32■■□□□ 1
CTSD-207ENST00000636571 DIEXFQ68CQ4 756 aaKnown RBP21.32■■□□□ 1
CTSD-207ENST00000636571 PHRF1Q9P1Y6 1649 aaKnown RBP21.3■■□□□ 1
CTSD-207ENST00000636571 NUTM2BA6NNL0 878 aaPredicted RBP21.3■■□□□ 1
CTSD-207ENST00000636571 NUTM2EB1AL46 878 aaPredicted RBP21.3■■□□□ 1
CTSD-207ENST00000636571 NUTM2AQ8IVF1 878 aaPredicted RBP21.3■■□□□ 1
CTSD-207ENST00000636571 SOX12O15370 315 aa21.29■■□□□ 1
CTSD-207ENST00000636571 KNSTRNQ9Y448 316 aa21.29■■□□□ 1
CTSD-207ENST00000636571 LRP6O75581 1613 aa21.28■■□□□ 1
CTSD-207ENST00000636571 OVOS2A0A0J9YW53 1432 aa21.28■■□□□ 1
CTSD-207ENST00000636571 OVOS2Q6IE36 1432 aa21.28■■□□□ 1
CTSD-207ENST00000636571 AMER1Q5JTC6 1135 aaPredicted RBP21.28■■□□□ 1
CTSD-207ENST00000636571 CGNL1Q0VF96 1302 aa21.28■■□□□ 1
CTSD-207ENST00000636571 USP54Q70EL1 1684 aa21.27■■□□□ 1
CTSD-207ENST00000636571 FBLN1P23142 703 aa21.27■■□□□ 1
CTSD-207ENST00000636571 NLRP13Q86W25 1043 aa21.27■■□□□ 1
CTSD-207ENST00000636571 USP19O94966 1318 aa21.27■■□□□ 1
CTSD-207ENST00000636571 USP31Q70CQ4 1352 aa21.27■■□□□ 1
CTSD-207ENST00000636571 SLIT3O75094 1523 aa21.25■□□□□ 0.99
CTSD-207ENST00000636571 CC2D1BQ5T0F9 858 aaKnown RBP21.25■□□□□ 0.99
CTSD-207ENST00000636571 ANKRD26Q9UPS8 1709 aa21.25■□□□□ 0.99
CTSD-207ENST00000636571 ADAMTS2O95450 1211 aa21.23■□□□□ 0.99
CTSD-207ENST00000636571 COG3Q96JB2 828 aa21.23■□□□□ 0.99
CTSD-207ENST00000636571 HAP1P54257 671 aaPredicted RBP21.23■□□□□ 0.99
CTSD-207ENST00000636571 SPATA31A6Q5VVP1 1343 aa21.22■□□□□ 0.99
CTSD-207ENST00000636571 GCP02774 474 aa21.22■□□□□ 0.99
CTSD-207ENST00000636571 ZC3H6P61129 1189 aaKnown RBP21.22■□□□□ 0.99
CTSD-207ENST00000636571 TNNT2P45379 298 aaPredicted RBP21.21■□□□□ 0.99
CTSD-207ENST00000636571 NFAT5O94916 1531 aa21.21■□□□□ 0.99
CTSD-207ENST00000636571 ZBTB7CA1YPR0 619 aa21.19■□□□□ 0.98
CTSD-207ENST00000636571 KIAA0232Q92628 1395 aa21.18■□□□□ 0.98
CTSD-207ENST00000636571 LTN1O94822 1766 aa21.18■□□□□ 0.98
CTSD-207ENST00000636571 CHRNA2Q15822 529 aa21.17■□□□□ 0.98
CTSD-207ENST00000636571 NSD2O96028 1365 aa21.17■□□□□ 0.98
CTSD-207ENST00000636571 RRS1Q15050 365 aaKnown RBP21.16■□□□□ 0.98
CTSD-207ENST00000636571 MORC1Q86VD1 984 aa21.16■□□□□ 0.98
CTSD-207ENST00000636571 MAP2P11137 1827 aaKnown RBP21.16■□□□□ 0.98
CTSD-207ENST00000636571 NPC1L1Q9UHC9 1359 aa21.15■□□□□ 0.98
CTSD-207ENST00000636571 FAM83GA6ND36 823 aa21.15■□□□□ 0.98
CTSD-207ENST00000636571 KCNH5Q8NCM2 988 aa21.15■□□□□ 0.98
CTSD-207ENST00000636571 C8orf37Q96NL8 207 aa21.14■□□□□ 0.97
CTSD-207ENST00000636571 RGPD5Q99666 1765 aa21.13■□□□□ 0.97
CTSD-207ENST00000636571 MEX3CQ5U5Q3 659 aaKnown RBP21.13■□□□□ 0.97
CTSD-207ENST00000636571 PRDM11Q9NQV5 511 aa21.13■□□□□ 0.97
CTSD-207ENST00000636571 PLCH1Q4KWH8 1693 aa21.12■□□□□ 0.97
CTSD-207ENST00000636571 PEAK1Q9H792 1746 aa21.12■□□□□ 0.97
CTSD-207ENST00000636571 ARHGEF25Q86VW2 580 aa21.12■□□□□ 0.97
CTSD-207ENST00000636571 MAP3K19Q56UN5 1328 aa21.12■□□□□ 0.97
CTSD-207ENST00000636571 CPDO75976 1380 aa21.11■□□□□ 0.97
CTSD-207ENST00000636571 COL18A1P39060 1754 aa21.11■□□□□ 0.97
CTSD-207ENST00000636571 EMILIN1Q9Y6C2 1016 aa21.11■□□□□ 0.97
CTSD-207ENST00000636571 AXIN2Q9Y2T1 843 aa21.1■□□□□ 0.97
CTSD-207ENST00000636571 COL14A1Q05707 1796 aaKnown RBP21.09■□□□□ 0.97
CTSD-207ENST00000636571 LMO7Q8WWI1 1683 aa21.09■□□□□ 0.97
CTSD-207ENST00000636571 MIER1Q8N108 512 aa21.08■□□□□ 0.97
CTSD-207ENST00000636571 NGLY1Q96IV0 654 aa21.08■□□□□ 0.97
CTSD-207ENST00000636571 POLKQ9UBT6 870 aa21.08■□□□□ 0.97
CTSD-207ENST00000636571 CAMTA1Q9Y6Y1 1673 aa21.08■□□□□ 0.96
CTSD-207ENST00000636571 PPM1GO15355 546 aaPredicted RBP21.08■□□□□ 0.96
CTSD-207ENST00000636571 AATKQ6ZMQ8 1374 aa21.07■□□□□ 0.96
CTSD-207ENST00000636571 PARD3Q8TEW0 1356 aa21.07■□□□□ 0.96
CTSD-207ENST00000636571 BTG4Q9NY30 223 aa21.06■□□□□ 0.96
CTSD-207ENST00000636571 AFF2P51816 1311 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms