RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 NPHP3Q7Z494 1330 aa19.78■□□□□ 0.76
LINC00339-208ENST00000634934 NSD3Q9BZ95 1437 aa19.78■□□□□ 0.76
LINC00339-208ENST00000634934 KRT28Q7Z3Y7 464 aa19.77■□□□□ 0.76
LINC00339-208ENST00000634934 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.77■□□□□ 0.76
LINC00339-208ENST00000634934 USP6P35125 1406 aa19.77■□□□□ 0.76
LINC00339-208ENST00000634934 JCADQ9P266 1359 aa19.77■□□□□ 0.76
LINC00339-208ENST00000634934 PAK3O75914 559 aaPredicted RBP19.76■□□□□ 0.75
LINC00339-208ENST00000634934 PER1O15534 1290 aaPredicted RBP19.76■□□□□ 0.75
LINC00339-208ENST00000634934 CNGB1Q14028 1251 aaPredicted RBP19.76■□□□□ 0.75
LINC00339-208ENST00000634934 MED1Q15648 1581 aaPredicted RBP19.76■□□□□ 0.75
LINC00339-208ENST00000634934 EDC4Q6P2E9 1401 aaKnown RBP19.75■□□□□ 0.75
LINC00339-208ENST00000634934 LRRC59Q96AG4 307 aaKnown RBP19.75■□□□□ 0.75
LINC00339-208ENST00000634934 AKAP12Q02952 1782 aa19.75■□□□□ 0.75
LINC00339-208ENST00000634934 TTC21BQ7Z4L5 1316 aa19.73■□□□□ 0.75
LINC00339-208ENST00000634934 TRPM3Q9HCF6 1732 aaPredicted RBP19.73■□□□□ 0.75
LINC00339-208ENST00000634934 PNPLA6Q8IY17 1366 aa19.73■□□□□ 0.75
LINC00339-208ENST00000634934 MON2Q7Z3U7 1717 aa19.72■□□□□ 0.75
LINC00339-208ENST00000634934 CGNL1Q0VF96 1302 aa19.72■□□□□ 0.75
LINC00339-208ENST00000634934 LMOD2Q6P5Q4 547 aa19.71■□□□□ 0.75
LINC00339-208ENST00000634934 LRP6O75581 1613 aa19.71■□□□□ 0.75
LINC00339-208ENST00000634934 BRD4O60885 1362 aaPredicted RBP19.71■□□□□ 0.75
LINC00339-208ENST00000634934 NME9Q86XW9 330 aa19.71■□□□□ 0.75
LINC00339-208ENST00000634934 SSH2Q76I76 1423 aa19.7■□□□□ 0.74
LINC00339-208ENST00000634934 AMER1Q5JTC6 1135 aaPredicted RBP19.7■□□□□ 0.74
LINC00339-208ENST00000634934 CC2D1BQ5T0F9 858 aaKnown RBP19.7■□□□□ 0.74
LINC00339-208ENST00000634934 TTC21AQ8NDW8 1320 aa19.69■□□□□ 0.74
LINC00339-208ENST00000634934 COL22A1Q8NFW1 1626 aaPredicted RBP19.69■□□□□ 0.74
LINC00339-208ENST00000634934 SPATA31A3Q5VYP0 1347 aa19.69■□□□□ 0.74
LINC00339-208ENST00000634934 NUTM2BA6NNL0 878 aaPredicted RBP19.68■□□□□ 0.74
LINC00339-208ENST00000634934 NUTM2EB1AL46 878 aaPredicted RBP19.68■□□□□ 0.74
LINC00339-208ENST00000634934 FYB1O15117 783 aa19.68■□□□□ 0.74
LINC00339-208ENST00000634934 NUTM2GQ5VZR2 741 aa19.68■□□□□ 0.74
LINC00339-208ENST00000634934 NUTM2AQ8IVF1 878 aaPredicted RBP19.68■□□□□ 0.74
LINC00339-208ENST00000634934 ABTB2Q8N961 1025 aa19.68■□□□□ 0.74
LINC00339-208ENST00000634934 GGNBP2Q9H3C7 697 aa19.68■□□□□ 0.74
LINC00339-208ENST00000634934 SBNO1A3KN83 1393 aa19.68■□□□□ 0.74
LINC00339-208ENST00000634934 TNS3Q68CZ2 1445 aa19.67■□□□□ 0.74
LINC00339-208ENST00000634934 ZRANB1Q9UGI0 708 aa19.67■□□□□ 0.74
LINC00339-208ENST00000634934 ALS2Q96Q42 1657 aa19.67■□□□□ 0.74
LINC00339-208ENST00000634934 NRKQ7Z2Y5 1582 aa19.67■□□□□ 0.74
LINC00339-208ENST00000634934 PLEKHG5O94827 1062 aa19.66■□□□□ 0.74
LINC00339-208ENST00000634934 SPATA31A6Q5VVP1 1343 aa19.66■□□□□ 0.74
LINC00339-208ENST00000634934 NLRP6P59044 892 aa19.66■□□□□ 0.74
LINC00339-208ENST00000634934 COG3Q96JB2 828 aa19.64■□□□□ 0.73
LINC00339-208ENST00000634934 NSD2O96028 1365 aa19.64■□□□□ 0.73
LINC00339-208ENST00000634934 ABCA3Q99758 1704 aa19.63■□□□□ 0.73
LINC00339-208ENST00000634934 MORC1Q86VD1 984 aa19.63■□□□□ 0.73
LINC00339-208ENST00000634934 NPC1L1Q9UHC9 1359 aa19.63■□□□□ 0.73
LINC00339-208ENST00000634934 ANP32CO43423 234 aa19.62■□□□□ 0.73
LINC00339-208ENST00000634934 ARHGEF10O15013 1369 aa19.61■□□□□ 0.73
LINC00339-208ENST00000634934 NLRP13Q86W25 1043 aa19.61■□□□□ 0.73
LINC00339-208ENST00000634934 CABLES1Q8TDN4 633 aa19.61■□□□□ 0.73
LINC00339-208ENST00000634934 TNNT2P45379 298 aaPredicted RBP19.61■□□□□ 0.73
LINC00339-208ENST00000634934 KIF20BQ96Q89 1820 aa19.6■□□□□ 0.73
LINC00339-208ENST00000634934 PIK3C2AO00443 1686 aa19.6■□□□□ 0.73
LINC00339-208ENST00000634934 USP31Q70CQ4 1352 aa19.6■□□□□ 0.73
LINC00339-208ENST00000634934 ADAMTS2O95450 1211 aa19.6■□□□□ 0.73
LINC00339-208ENST00000634934 CRYBG1Q9Y4K1 1723 aa19.6■□□□□ 0.73
LINC00339-208ENST00000634934 SOX12O15370 315 aa19.59■□□□□ 0.73
LINC00339-208ENST00000634934 MEX3CQ5U5Q3 659 aaKnown RBP19.59■□□□□ 0.73
LINC00339-208ENST00000634934 MARF1Q9Y4F3 1742 aaKnown RBP19.58■□□□□ 0.73
LINC00339-208ENST00000634934 MIER1Q8N108 512 aa19.58■□□□□ 0.73
LINC00339-208ENST00000634934 PRKRIP1Q9H875 184 aaPredicted RBP19.58■□□□□ 0.73
LINC00339-208ENST00000634934 OVOS2A0A0J9YW53 1432 aa19.58■□□□□ 0.72
LINC00339-208ENST00000634934 OVOS2Q6IE36 1432 aa19.58■□□□□ 0.72
LINC00339-208ENST00000634934 RALBP1Q15311 655 aa19.57■□□□□ 0.72
LINC00339-208ENST00000634934 PHF23Q9BUL5 403 aaPredicted RBP19.57■□□□□ 0.72
LINC00339-208ENST00000634934 GTF3C3Q9Y5Q9 886 aa19.56■□□□□ 0.72
LINC00339-208ENST00000634934 RGS17Q9UGC6 210 aaPredicted RBP19.56■□□□□ 0.72
LINC00339-208ENST00000634934 PARD3Q8TEW0 1356 aa19.55■□□□□ 0.72
LINC00339-208ENST00000634934 PHRF1Q9P1Y6 1649 aaKnown RBP19.55■□□□□ 0.72
LINC00339-208ENST00000634934 C8orf37Q96NL8 207 aa19.55■□□□□ 0.72
LINC00339-208ENST00000634934 USP19O94966 1318 aa19.54■□□□□ 0.72
LINC00339-208ENST00000634934 FBLN1P23142 703 aa19.54■□□□□ 0.72
LINC00339-208ENST00000634934 HAP1P54257 671 aaPredicted RBP19.54■□□□□ 0.72
LINC00339-208ENST00000634934 KCNH5Q8NCM2 988 aa19.53■□□□□ 0.72
LINC00339-208ENST00000634934 GCP02774 474 aa19.52■□□□□ 0.72
LINC00339-208ENST00000634934 ANKRD26Q9UPS8 1709 aa19.52■□□□□ 0.72
LINC00339-208ENST00000634934 PPP2R1AP30153 589 aa19.51■□□□□ 0.71
LINC00339-208ENST00000634934 ZBTB7CA1YPR0 619 aa19.5■□□□□ 0.71
LINC00339-208ENST00000634934 RRS1Q15050 365 aaKnown RBP19.5■□□□□ 0.71
LINC00339-208ENST00000634934 AFF2P51816 1311 aa19.49■□□□□ 0.71
LINC00339-208ENST00000634934 MYBBP1AQ9BQG0 1328 aaKnown RBP19.49■□□□□ 0.71
LINC00339-208ENST00000634934 USP54Q70EL1 1684 aa19.49■□□□□ 0.71
LINC00339-208ENST00000634934 ZC3H6P61129 1189 aaKnown RBP19.49■□□□□ 0.71
LINC00339-208ENST00000634934 NGLY1Q96IV0 654 aa19.49■□□□□ 0.71
LINC00339-208ENST00000634934 SLIT3O75094 1523 aa19.49■□□□□ 0.71
LINC00339-208ENST00000634934 AATKQ6ZMQ8 1374 aa19.48■□□□□ 0.71
LINC00339-208ENST00000634934 PPM1GO15355 546 aaPredicted RBP19.48■□□□□ 0.71
LINC00339-208ENST00000634934 PLCH1Q4KWH8 1693 aa19.47■□□□□ 0.71
LINC00339-208ENST00000634934 POTEAQ6S8J7 498 aa19.46■□□□□ 0.71
LINC00339-208ENST00000634934 POLKQ9UBT6 870 aa19.46■□□□□ 0.71
LINC00339-208ENST00000634934 EMILIN1Q9Y6C2 1016 aa19.46■□□□□ 0.71
LINC00339-208ENST00000634934 MTHFSP49914 203 aa19.46■□□□□ 0.71
LINC00339-208ENST00000634934 NFAT5O94916 1531 aa19.45■□□□□ 0.7
LINC00339-208ENST00000634934 MAP3K19Q56UN5 1328 aa19.45■□□□□ 0.7
LINC00339-208ENST00000634934 AMPHP49418 695 aa19.45■□□□□ 0.7
LINC00339-208ENST00000634934 FAM83GA6ND36 823 aa19.44■□□□□ 0.7
LINC00339-208ENST00000634934 ILDR2Q71H61 639 aa19.43■□□□□ 0.7
LINC00339-208ENST00000634934 ARHGEF25Q86VW2 580 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms