RNA–Protein interactions for RNA: ENST00000630720.3

TCF4-273, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-273ENST00000630720 PHF8Q9UPP1 1060 aa12.04□□□□□ -0.48
TCF4-273ENST00000630720 ATP7BP35670 1465 aa12.04□□□□□ -0.48
TCF4-273ENST00000630720 NHSL1Q5SYE7 1610 aa12.03□□□□□ -0.48
TCF4-273ENST00000630720 SLC24A1O60721 1099 aa12.03□□□□□ -0.48
TCF4-273ENST00000630720 DISP3Q9P2K9 1392 aa12.03□□□□□ -0.48
TCF4-273ENST00000630720 COL16A1Q07092 1604 aaPredicted RBP12.02□□□□□ -0.48
TCF4-273ENST00000630720 AHDC1Q5TGY3 1603 aaPredicted RBP12.02□□□□□ -0.48
TCF4-273ENST00000630720 ANKARQ7Z5J8 1434 aa12.02□□□□□ -0.48
TCF4-273ENST00000630720 CDCA8Q53HL2 280 aa12.01□□□□□ -0.49
TCF4-273ENST00000630720 EVC2Q86UK5 1308 aa12.01□□□□□ -0.49
TCF4-273ENST00000630720 SBNO2Q9Y2G9 1366 aa12□□□□□ -0.49
TCF4-273ENST00000630720 TOPAZ1Q8N9V7 1692 aa12□□□□□ -0.49
TCF4-273ENST00000630720 CCDC61Q9Y6R9 512 aa12□□□□□ -0.49
TCF4-273ENST00000630720 PXDNQ92626 1479 aa11.99□□□□□ -0.49
TCF4-273ENST00000630720 KRT28Q7Z3Y7 464 aa11.99□□□□□ -0.49
TCF4-273ENST00000630720 CABP1Q9NZU7 370 aa11.99□□□□□ -0.49
TCF4-273ENST00000630720 SOS2Q07890 1332 aaPredicted RBP11.99□□□□□ -0.49
TCF4-273ENST00000630720 PPIP5K1Q6PFW1 1433 aa11.99□□□□□ -0.49
TCF4-273ENST00000630720 NGDNQ8NEJ9 315 aaKnown RBP11.98□□□□□ -0.49
TCF4-273ENST00000630720 ACEP12821 1306 aa11.98□□□□□ -0.49
TCF4-273ENST00000630720 NPHP3Q7Z494 1330 aa11.98□□□□□ -0.49
TCF4-273ENST00000630720 KIF1AQ12756 1690 aa11.98□□□□□ -0.49
TCF4-273ENST00000630720 NEFLP07196 543 aa11.97□□□□□ -0.49
TCF4-273ENST00000630720 PSME1Q06323 249 aa11.97□□□□□ -0.49
TCF4-273ENST00000630720 ITSN1Q15811 1721 aa11.97□□□□□ -0.49
TCF4-273ENST00000630720 PRKRIP1Q9H875 184 aaPredicted RBP11.97□□□□□ -0.49
TCF4-273ENST00000630720 PLEKHG5O94827 1062 aa11.96□□□□□ -0.49
TCF4-273ENST00000630720 PLEKHG3A1L390 1219 aa11.96□□□□□ -0.5
TCF4-273ENST00000630720 TMC1Q8TDI8 760 aa11.96□□□□□ -0.5
TCF4-273ENST00000630720 LRRC59Q96AG4 307 aaKnown RBP11.96□□□□□ -0.5
TCF4-273ENST00000630720 SPDYE4A6NLX3 237 aa11.95□□□□□ -0.5
TCF4-273ENST00000630720 CNGB1Q14028 1251 aaPredicted RBP11.95□□□□□ -0.5
TCF4-273ENST00000630720 SLC12A5Q9H2X9 1139 aa11.95□□□□□ -0.5
TCF4-273ENST00000630720 POLR3AO14802 1390 aaPredicted RBP11.94□□□□□ -0.5
TCF4-273ENST00000630720 PNPLA6Q8IY17 1366 aa11.94□□□□□ -0.5
TCF4-273ENST00000630720 JCADQ9P266 1359 aa11.94□□□□□ -0.5
TCF4-273ENST00000630720 LMOD2Q6P5Q4 547 aa11.94□□□□□ -0.5
TCF4-273ENST00000630720 SPATA31A3Q5VYP0 1347 aa11.93□□□□□ -0.5
TCF4-273ENST00000630720 NUTM2BA6NNL0 878 aaPredicted RBP11.93□□□□□ -0.5
TCF4-273ENST00000630720 NUTM2EB1AL46 878 aaPredicted RBP11.93□□□□□ -0.5
TCF4-273ENST00000630720 PAK3O75914 559 aaPredicted RBP11.93□□□□□ -0.5
TCF4-273ENST00000630720 HNRNPUQ00839 825 aaKnown RBP eCLIP11.93□□□□□ -0.5
TCF4-273ENST00000630720 NUTM2AQ8IVF1 878 aaPredicted RBP11.93□□□□□ -0.5
TCF4-273ENST00000630720 RBM42Q9BTD8 480 aaKnown RBP11.93□□□□□ -0.5
TCF4-273ENST00000630720 TRPM3Q9HCF6 1732 aaPredicted RBP11.93□□□□□ -0.5
TCF4-273ENST00000630720 ATAD2Q6PL18 1390 aa11.93□□□□□ -0.5
TCF4-273ENST00000630720 CABLES1Q8TDN4 633 aa11.92□□□□□ -0.5
TCF4-273ENST00000630720 PANK3Q9H999 370 aa11.92□□□□□ -0.5
TCF4-273ENST00000630720 SHPRHQ149N8 1683 aa11.92□□□□□ -0.5
TCF4-273ENST00000630720 CD163L1Q9NR16 1453 aa11.92□□□□□ -0.5
TCF4-273ENST00000630720 NUTM2GQ5VZR2 741 aa11.92□□□□□ -0.5
TCF4-273ENST00000630720 LRP6O75581 1613 aa11.92□□□□□ -0.5
TCF4-273ENST00000630720 PUS7Q96PZ0 661 aaKnown RBP11.91□□□□□ -0.5
TCF4-273ENST00000630720 TNS3Q68CZ2 1445 aa11.91□□□□□ -0.5
TCF4-273ENST00000630720 SBNO1A3KN83 1393 aa11.91□□□□□ -0.5
TCF4-273ENST00000630720 USP6P35125 1406 aa11.9□□□□□ -0.5
TCF4-273ENST00000630720 CPSF1Q10570 1443 aaKnown RBP11.9□□□□□ -0.5
TCF4-273ENST00000630720 ALS2Q96Q42 1657 aa11.9□□□□□ -0.5
TCF4-273ENST00000630720 AKAP12Q02952 1782 aa11.9□□□□□ -0.5
TCF4-273ENST00000630720 MED1Q15648 1581 aaPredicted RBP11.89□□□□□ -0.51
TCF4-273ENST00000630720 ADAMTS2O95450 1211 aa11.89□□□□□ -0.51
TCF4-273ENST00000630720 CCDC184Q52MB2 194 aa11.89□□□□□ -0.51
TCF4-273ENST00000630720 MRS2Q9HD23 443 aa11.89□□□□□ -0.51
TCF4-273ENST00000630720 A0A1W2PP64 1363 aa11.89□□□□□ -0.51
TCF4-273ENST00000630720 MYOM1P52179 1685 aa11.89□□□□□ -0.51
TCF4-273ENST00000630720 SSH2Q76I76 1423 aa11.89□□□□□ -0.51
TCF4-273ENST00000630720 KTN1Q86UP2 1357 aaKnown RBP11.88□□□□□ -0.51
TCF4-273ENST00000630720 SPATA31A6Q5VVP1 1343 aa11.88□□□□□ -0.51
TCF4-273ENST00000630720 COL22A1Q8NFW1 1626 aaPredicted RBP11.88□□□□□ -0.51
TCF4-273ENST00000630720 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.88□□□□□ -0.51
TCF4-273ENST00000630720 ABTB2Q8N961 1025 aa11.88□□□□□ -0.51
TCF4-273ENST00000630720 TSHZ2Q9NRE2 1034 aa11.88□□□□□ -0.51
TCF4-273ENST00000630720 ZRANB1Q9UGI0 708 aa11.88□□□□□ -0.51
TCF4-273ENST00000630720 KNSTRNQ9Y448 316 aa11.88□□□□□ -0.51
TCF4-273ENST00000630720 MON2Q7Z3U7 1717 aa11.87□□□□□ -0.51
TCF4-273ENST00000630720 TTC21BQ7Z4L5 1316 aa11.86□□□□□ -0.51
TCF4-273ENST00000630720 NRKQ7Z2Y5 1582 aa11.86□□□□□ -0.51
TCF4-273ENST00000630720 HDGFL2Q7Z4V5 671 aaPredicted RBP11.86□□□□□ -0.51
TCF4-273ENST00000630720 ZNF692Q9BU19 519 aaPredicted RBP11.86□□□□□ -0.51
TCF4-273ENST00000630720 ARHGEF10O15013 1369 aa11.85□□□□□ -0.51
TCF4-273ENST00000630720 SPDYE2BA6NHP3 402 aa11.85□□□□□ -0.51
TCF4-273ENST00000630720 SPDYE6P0CI01 402 aa11.85□□□□□ -0.51
TCF4-273ENST00000630720 SPDYE2Q495Y8 402 aa11.85□□□□□ -0.51
TCF4-273ENST00000630720 ERICH6BQ5W0A0 696 aa11.85□□□□□ -0.51
TCF4-273ENST00000630720 NME9Q86XW9 330 aa11.85□□□□□ -0.51
TCF4-273ENST00000630720 CARD14Q9BXL6 1004 aa11.85□□□□□ -0.51
TCF4-273ENST00000630720 TERF2IPQ9NYB0 399 aa11.85□□□□□ -0.51
TCF4-273ENST00000630720 PIK3C2AO00443 1686 aa11.85□□□□□ -0.51
TCF4-273ENST00000630720 ZBED9Q6R2W3 1325 aa11.85□□□□□ -0.51
TCF4-273ENST00000630720 ABCA3Q99758 1704 aa11.85□□□□□ -0.51
TCF4-273ENST00000630720 CC2D1BQ5T0F9 858 aaKnown RBP11.84□□□□□ -0.51
TCF4-273ENST00000630720 MEX3CQ5U5Q3 659 aaKnown RBP11.84□□□□□ -0.51
TCF4-273ENST00000630720 FAM9BQ8IZU0 186 aa11.84□□□□□ -0.51
TCF4-273ENST00000630720 C8orf37Q96NL8 207 aa11.84□□□□□ -0.51
TCF4-273ENST00000630720 RGS17Q9UGC6 210 aaPredicted RBP11.84□□□□□ -0.51
TCF4-273ENST00000630720 CRYBG1Q9Y4K1 1723 aa11.84□□□□□ -0.51
TCF4-273ENST00000630720 ANKRD36BQ8N2N9 1353 aa11.84□□□□□ -0.51
TCF4-273ENST00000630720 NINLQ9Y2I6 1382 aa11.84□□□□□ -0.51
TCF4-273ENST00000630720 PER1O15534 1290 aaPredicted RBP11.84□□□□□ -0.51
TCF4-273ENST00000630720 NLRP6P59044 892 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms