RNA–Protein interactions for RNA: ENST00000628810.1

SOX2-OT-249, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 618 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-249ENST00000628810 WASHC2AQ641Q2 1341 aa13.72□□□□□ -0.21
SOX2-OT-249ENST00000628810 SLAIN2Q9P270 581 aa13.72□□□□□ -0.21
SOX2-OT-249ENST00000628810 CCDC61Q9Y6R9 512 aa13.72□□□□□ -0.21
SOX2-OT-249ENST00000628810 CD163L1Q9NR16 1453 aa13.72□□□□□ -0.21
SOX2-OT-249ENST00000628810 AHDC1Q5TGY3 1603 aaPredicted RBP13.72□□□□□ -0.21
SOX2-OT-249ENST00000628810 NRKQ7Z2Y5 1582 aa13.71□□□□□ -0.21
SOX2-OT-249ENST00000628810 AKAP12Q02952 1782 aa13.71□□□□□ -0.21
SOX2-OT-249ENST00000628810 TOM1O60784 492 aa13.71□□□□□ -0.21
SOX2-OT-249ENST00000628810 MON2Q7Z3U7 1717 aa13.7□□□□□ -0.22
SOX2-OT-249ENST00000628810 PLEKHG3A1L390 1219 aa13.7□□□□□ -0.22
SOX2-OT-249ENST00000628810 CPSF1Q10570 1443 aaKnown RBP13.7□□□□□ -0.22
SOX2-OT-249ENST00000628810 NUTM2FA1L443 756 aa13.69□□□□□ -0.22
SOX2-OT-249ENST00000628810 BRINP3Q76B58 766 aa13.69□□□□□ -0.22
SOX2-OT-249ENST00000628810 UBAP1LF5GYI3 381 aa13.68□□□□□ -0.22
SOX2-OT-249ENST00000628810 ANKRD36BQ8N2N9 1353 aa13.68□□□□□ -0.22
SOX2-OT-249ENST00000628810 PXDNQ92626 1479 aa13.67□□□□□ -0.22
SOX2-OT-249ENST00000628810 TRPM3Q9HCF6 1732 aaPredicted RBP13.67□□□□□ -0.22
SOX2-OT-249ENST00000628810 ZNF316A6NFI3 1004 aaPredicted RBP13.67□□□□□ -0.22
SOX2-OT-249ENST00000628810 ESCO1Q5FWF5 840 aa13.67□□□□□ -0.22
SOX2-OT-249ENST00000628810 ORAI2Q96SN7 254 aa13.67□□□□□ -0.22
SOX2-OT-249ENST00000628810 PHF8Q9UPP1 1060 aa13.67□□□□□ -0.22
SOX2-OT-249ENST00000628810 CABP1Q9NZU7 370 aa13.66□□□□□ -0.22
SOX2-OT-249ENST00000628810 A0A1W2PP64 1363 aa13.66□□□□□ -0.22
SOX2-OT-249ENST00000628810 BRD4O60885 1362 aaPredicted RBP13.66□□□□□ -0.22
SOX2-OT-249ENST00000628810 USP6P35125 1406 aa13.65□□□□□ -0.22
SOX2-OT-249ENST00000628810 SSH2Q76I76 1423 aa13.65□□□□□ -0.22
SOX2-OT-249ENST00000628810 ACEP12821 1306 aa13.64□□□□□ -0.23
SOX2-OT-249ENST00000628810 NPHP3Q7Z494 1330 aa13.64□□□□□ -0.23
SOX2-OT-249ENST00000628810 COL16A1Q07092 1604 aaPredicted RBP13.64□□□□□ -0.23
SOX2-OT-249ENST00000628810 SLC12A5Q9H2X9 1139 aa13.64□□□□□ -0.23
SOX2-OT-249ENST00000628810 EDC4Q6P2E9 1401 aaKnown RBP13.64□□□□□ -0.23
SOX2-OT-249ENST00000628810 ALS2Q96Q42 1657 aa13.63□□□□□ -0.23
SOX2-OT-249ENST00000628810 TERF2IPQ9NYB0 399 aa13.63□□□□□ -0.23
SOX2-OT-249ENST00000628810 SOS2Q07890 1332 aaPredicted RBP13.63□□□□□ -0.23
SOX2-OT-249ENST00000628810 USP54Q70EL1 1684 aa13.63□□□□□ -0.23
SOX2-OT-249ENST00000628810 PHLPP1O60346 1717 aa13.62□□□□□ -0.23
SOX2-OT-249ENST00000628810 SBNO1A3KN83 1393 aa13.62□□□□□ -0.23
SOX2-OT-249ENST00000628810 PMFBP1Q8TBY8 1022 aa13.62□□□□□ -0.23
SOX2-OT-249ENST00000628810 TMC1Q8TDI8 760 aa13.62□□□□□ -0.23
SOX2-OT-249ENST00000628810 KTN1Q86UP2 1357 aaKnown RBP13.61□□□□□ -0.23
SOX2-OT-249ENST00000628810 FOXO3O43524 673 aa13.61□□□□□ -0.23
SOX2-OT-249ENST00000628810 PRR29P0C7W0 189 aa13.61□□□□□ -0.23
SOX2-OT-249ENST00000628810 HDGFL2Q7Z4V5 671 aaPredicted RBP13.61□□□□□ -0.23
SOX2-OT-249ENST00000628810 NGDNQ8NEJ9 315 aaKnown RBP13.61□□□□□ -0.23
SOX2-OT-249ENST00000628810 PIK3C2AO00443 1686 aa13.6□□□□□ -0.23
SOX2-OT-249ENST00000628810 PRKAR2AP13861 404 aaKnown RBP13.6□□□□□ -0.23
SOX2-OT-249ENST00000628810 PIP4K2BP78356 416 aa13.6□□□□□ -0.23
SOX2-OT-249ENST00000628810 MED1Q15648 1581 aaPredicted RBP13.6□□□□□ -0.23
SOX2-OT-249ENST00000628810 TNS3Q68CZ2 1445 aa13.6□□□□□ -0.23
SOX2-OT-249ENST00000628810 POLR3GLQ9BT43 218 aa13.6□□□□□ -0.23
SOX2-OT-249ENST00000628810 NSD3Q9BZ95 1437 aa13.59□□□□□ -0.23
SOX2-OT-249ENST00000628810 COL22A1Q8NFW1 1626 aaPredicted RBP13.59□□□□□ -0.23
SOX2-OT-249ENST00000628810 KIF20BQ96Q89 1820 aa13.59□□□□□ -0.23
SOX2-OT-249ENST00000628810 SPDYE4A6NLX3 237 aa13.58□□□□□ -0.24
SOX2-OT-249ENST00000628810 HAX1O00165 279 aa13.58□□□□□ -0.24
SOX2-OT-249ENST00000628810 FBXO41Q8TF61 875 aa13.58□□□□□ -0.24
SOX2-OT-249ENST00000628810 CARD14Q9BXL6 1004 aa13.58□□□□□ -0.24
SOX2-OT-249ENST00000628810 PANK3Q9H999 370 aa13.58□□□□□ -0.24
SOX2-OT-249ENST00000628810 MARF1Q9Y4F3 1742 aaKnown RBP13.58□□□□□ -0.24
SOX2-OT-249ENST00000628810 CRYBG1Q9Y4K1 1723 aa13.58□□□□□ -0.24
SOX2-OT-249ENST00000628810 TTC21AQ8NDW8 1320 aa13.58□□□□□ -0.24
SOX2-OT-249ENST00000628810 SHPRHQ149N8 1683 aa13.57□□□□□ -0.24
SOX2-OT-249ENST00000628810 ANKRD26Q9UPS8 1709 aa13.57□□□□□ -0.24
SOX2-OT-249ENST00000628810 PSME1Q06323 249 aa13.57□□□□□ -0.24
SOX2-OT-249ENST00000628810 KRT28Q7Z3Y7 464 aa13.57□□□□□ -0.24
SOX2-OT-249ENST00000628810 DDX17Q92841 729 aaKnown RBP13.57□□□□□ -0.24
SOX2-OT-249ENST00000628810 TTC21BQ7Z4L5 1316 aa13.57□□□□□ -0.24
SOX2-OT-249ENST00000628810 PER1O15534 1290 aaPredicted RBP13.56□□□□□ -0.24
SOX2-OT-249ENST00000628810 SPATA31A3Q5VYP0 1347 aa13.56□□□□□ -0.24
SOX2-OT-249ENST00000628810 ARHGEF10O15013 1369 aa13.56□□□□□ -0.24
SOX2-OT-249ENST00000628810 NPC1L1Q9UHC9 1359 aa13.56□□□□□ -0.24
SOX2-OT-249ENST00000628810 ABCA3Q99758 1704 aa13.56□□□□□ -0.24
SOX2-OT-249ENST00000628810 OVOS2A0A0J9YW53 1432 aa13.56□□□□□ -0.24
SOX2-OT-249ENST00000628810 OVOS2Q6IE36 1432 aa13.56□□□□□ -0.24
SOX2-OT-249ENST00000628810 NSD2O96028 1365 aa13.55□□□□□ -0.24
SOX2-OT-249ENST00000628810 USP31Q70CQ4 1352 aa13.55□□□□□ -0.24
SOX2-OT-249ENST00000628810 SLIT3O75094 1523 aa13.54□□□□□ -0.24
SOX2-OT-249ENST00000628810 PHRF1Q9P1Y6 1649 aaKnown RBP13.54□□□□□ -0.24
SOX2-OT-249ENST00000628810 XPCQ01831 940 aaPredicted RBP13.54□□□□□ -0.24
SOX2-OT-249ENST00000628810 CGNL1Q0VF96 1302 aa13.53□□□□□ -0.24
SOX2-OT-249ENST00000628810 PNPLA6Q8IY17 1366 aa13.53□□□□□ -0.24
SOX2-OT-249ENST00000628810 DDX10Q13206 875 aaKnown RBP13.52□□□□□ -0.25
SOX2-OT-249ENST00000628810 AMER1Q5JTC6 1135 aaPredicted RBP13.52□□□□□ -0.25
SOX2-OT-249ENST00000628810 SP7Q8TDD2 431 aaPredicted RBP13.52□□□□□ -0.25
SOX2-OT-249ENST00000628810 LRRC59Q96AG4 307 aaKnown RBP13.52□□□□□ -0.25
SOX2-OT-249ENST00000628810 USP19O94966 1318 aa13.52□□□□□ -0.25
SOX2-OT-249ENST00000628810 JCADQ9P266 1359 aa13.51□□□□□ -0.25
SOX2-OT-249ENST00000628810 HSPA1LP34931 641 aa13.51□□□□□ -0.25
SOX2-OT-249ENST00000628810 KNSTRNQ9Y448 316 aa13.51□□□□□ -0.25
SOX2-OT-249ENST00000628810 NFAT5O94916 1531 aa13.5□□□□□ -0.25
SOX2-OT-249ENST00000628810 FYB1O15117 783 aa13.5□□□□□ -0.25
SOX2-OT-249ENST00000628810 PAK3O75914 559 aaPredicted RBP13.49□□□□□ -0.25
SOX2-OT-249ENST00000628810 NME9Q86XW9 330 aa13.49□□□□□ -0.25
SOX2-OT-249ENST00000628810 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.49□□□□□ -0.25
SOX2-OT-249ENST00000628810 ABTB2Q8N961 1025 aa13.49□□□□□ -0.25
SOX2-OT-249ENST00000628810 ABCC6O95255 1503 aa13.46□□□□□ -0.25
SOX2-OT-249ENST00000628810 NLRP13Q86W25 1043 aa13.46□□□□□ -0.25
SOX2-OT-249ENST00000628810 PARD3Q8TEW0 1356 aa13.45□□□□□ -0.26
SOX2-OT-249ENST00000628810 SPATA31A6Q5VVP1 1343 aa13.45□□□□□ -0.26
SOX2-OT-249ENST00000628810 NLRP6P59044 892 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms