RNA–Protein interactions for RNA: ENST00000624688.2

C3orf56-201, Transcript of chromosome 3 open reading frame 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C3orf56, Length 1,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56-201ENST00000624688 NRKQ7Z2Y5 1582 aa17.47■□□□□ 0.39
C3orf56-201ENST00000624688 PNPLA6Q8IY17 1366 aa17.47■□□□□ 0.39
C3orf56-201ENST00000624688 SETD1BQ9UPS6 1966 aaKnown RBP17.47■□□□□ 0.39
C3orf56-201ENST00000624688 NKTRP30414 1462 aaKnown RBP17.47■□□□□ 0.39
C3orf56-201ENST00000624688 RRP1P56182 461 aaKnown RBP17.46■□□□□ 0.39
C3orf56-201ENST00000624688 SLFN5Q08AF3 891 aa17.46■□□□□ 0.39
C3orf56-201ENST00000624688 ANKLE2Q86XL3 938 aa17.46■□□□□ 0.39
C3orf56-201ENST00000624688 NME9Q86XW9 330 aa17.46■□□□□ 0.39
C3orf56-201ENST00000624688 TRMT2AQ8IZ69 625 aaKnown RBP17.46■□□□□ 0.39
C3orf56-201ENST00000624688 PLEKHG3A1L390 1219 aa17.45■□□□□ 0.38
C3orf56-201ENST00000624688 PELP1Q8IZL8 1130 aaKnown RBP17.45■□□□□ 0.38
C3orf56-201ENST00000624688 ZNF692Q9BU19 519 aaPredicted RBP17.45■□□□□ 0.38
C3orf56-201ENST00000624688 KCNA6P17658 529 aa17.44■□□□□ 0.38
C3orf56-201ENST00000624688 SPINK5Q9NQ38 1064 aaPredicted RBP17.44■□□□□ 0.38
C3orf56-201ENST00000624688 ZRANB1Q9UGI0 708 aa17.44■□□□□ 0.38
C3orf56-201ENST00000624688 CHD2O14647 1828 aaKnown RBP17.44■□□□□ 0.38
C3orf56-201ENST00000624688 NUTM2FA1L443 756 aa17.43■□□□□ 0.38
C3orf56-201ENST00000624688 FBLN1P23142 703 aa17.43■□□□□ 0.38
C3orf56-201ENST00000624688 POLKQ9UBT6 870 aa17.43■□□□□ 0.38
C3orf56-201ENST00000624688 DMRT2Q9Y5R5 561 aa17.43■□□□□ 0.38
C3orf56-201ENST00000624688 MAP2P11137 1827 aaKnown RBP17.43■□□□□ 0.38
C3orf56-201ENST00000624688 ACEP12821 1306 aa17.43■□□□□ 0.38
C3orf56-201ENST00000624688 U2AF1L5P0DN76 240 aaPredicted RBP17.42■□□□□ 0.38
C3orf56-201ENST00000624688 U2AF1Q01081 240 aaKnown RBP eCLIP17.42■□□□□ 0.38
C3orf56-201ENST00000624688 WWC1Q8IX03 1113 aa17.42■□□□□ 0.38
C3orf56-201ENST00000624688 TCP11L2Q8N4U5 519 aa17.42■□□□□ 0.38
C3orf56-201ENST00000624688 RGPD8O14715 1765 aaPredicted RBP17.41■□□□□ 0.38
C3orf56-201ENST00000624688 AATKQ6ZMQ8 1374 aa17.41■□□□□ 0.38
C3orf56-201ENST00000624688 USP6P35125 1406 aa17.41■□□□□ 0.38
C3orf56-201ENST00000624688 PLEKHF1Q96S99 279 aa17.4■□□□□ 0.38
C3orf56-201ENST00000624688 FMN2Q9NZ56 1722 aa17.39■□□□□ 0.38
C3orf56-201ENST00000624688 SSH2Q76I76 1423 aa17.39■□□□□ 0.37
C3orf56-201ENST00000624688 DIAPH1O60610 1272 aaKnown RBP17.39■□□□□ 0.37
C3orf56-201ENST00000624688 RRP7AQ9Y3A4 280 aaKnown RBP17.39■□□□□ 0.37
C3orf56-201ENST00000624688 TTC21BQ7Z4L5 1316 aa17.39■□□□□ 0.37
C3orf56-201ENST00000624688 E9PSI1 815 aa17.38■□□□□ 0.37
C3orf56-201ENST00000624688 NCBP3Q53F19 620 aaKnown RBP17.38■□□□□ 0.37
C3orf56-201ENST00000624688 COG3Q96JB2 828 aa17.38■□□□□ 0.37
C3orf56-201ENST00000624688 U2SURPO15042 1029 aaKnown RBP17.38■□□□□ 0.37
C3orf56-201ENST00000624688 CCDC27Q2M243 656 aa17.38■□□□□ 0.37
C3orf56-201ENST00000624688 B4GALNT3Q6L9W6 998 aa17.38■□□□□ 0.37
C3orf56-201ENST00000624688 NPHP4O75161 1426 aaPredicted RBP17.37■□□□□ 0.37
C3orf56-201ENST00000624688 NALCNQ8IZF0 1738 aa17.37■□□□□ 0.37
C3orf56-201ENST00000624688 CDK12Q9NYV4 1490 aaPredicted RBP17.37■□□□□ 0.37
C3orf56-201ENST00000624688 EMILIN1Q9Y6C2 1016 aa17.37■□□□□ 0.37
C3orf56-201ENST00000624688 ANKARQ7Z5J8 1434 aa17.37■□□□□ 0.37
C3orf56-201ENST00000624688 NEUROD2Q15784 382 aa17.36■□□□□ 0.37
C3orf56-201ENST00000624688 OVOS2A0A0J9YW53 1432 aa17.36■□□□□ 0.37
C3orf56-201ENST00000624688 OVOS2Q6IE36 1432 aa17.36■□□□□ 0.37
C3orf56-201ENST00000624688 PPM1GO15355 546 aaPredicted RBP17.34■□□□□ 0.37
C3orf56-201ENST00000624688 PLIN1O60240 522 aa17.34■□□□□ 0.37
C3orf56-201ENST00000624688 WDR63Q8IWG1 891 aa17.34■□□□□ 0.37
C3orf56-201ENST00000624688 PMFBP1Q8TBY8 1022 aa17.34■□□□□ 0.37
C3orf56-201ENST00000624688 LRRC7Q96NW7 1537 aa17.33■□□□□ 0.36
C3orf56-201ENST00000624688 RRS1Q15050 365 aaKnown RBP17.33■□□□□ 0.36
C3orf56-201ENST00000624688 EXOC6Q8TAG9 804 aa17.33■□□□□ 0.36
C3orf56-201ENST00000624688 TSHZ2Q9NRE2 1034 aa17.33■□□□□ 0.36
C3orf56-201ENST00000624688 IL13P35225 146 aa17.32■□□□□ 0.36
C3orf56-201ENST00000624688 USP31Q70CQ4 1352 aa17.31■□□□□ 0.36
C3orf56-201ENST00000624688 TTC21AQ8NDW8 1320 aa17.31■□□□□ 0.36
C3orf56-201ENST00000624688 TMPOP42166 694 aaKnown RBP17.31■□□□□ 0.36
C3orf56-201ENST00000624688 FCHSD2O94868 740 aa17.3■□□□□ 0.36
C3orf56-201ENST00000624688 RSPH6AQ9H0K4 717 aa17.3■□□□□ 0.36
C3orf56-201ENST00000624688 NWD1Q149M9 1564 aa17.3■□□□□ 0.36
C3orf56-201ENST00000624688 NGDNQ8NEJ9 315 aaKnown RBP17.3■□□□□ 0.36
C3orf56-201ENST00000624688 PIK3C2AO00443 1686 aa17.29■□□□□ 0.36
C3orf56-201ENST00000624688 PNNQ9H307 717 aaKnown RBP17.29■□□□□ 0.36
C3orf56-201ENST00000624688 TRIM35Q9UPQ4 493 aa17.29■□□□□ 0.36
C3orf56-201ENST00000624688 ADGRL3Q9HAR2 1447 aa17.29■□□□□ 0.36
C3orf56-201ENST00000624688 PEAK1Q9H792 1746 aa17.29■□□□□ 0.36
C3orf56-201ENST00000624688 MAPK8IP3Q9UPT6 1336 aa17.28■□□□□ 0.36
C3orf56-201ENST00000624688 RBM33Q96EV2 1170 aaKnown RBP17.28■□□□□ 0.36
C3orf56-201ENST00000624688 C20orf194Q5TEA3 1177 aa17.27■□□□□ 0.36
C3orf56-201ENST00000624688 CCDC136Q96JN2 1154 aa17.27■□□□□ 0.36
C3orf56-201ENST00000624688 PRKAR2BP31323 418 aa17.27■□□□□ 0.35
C3orf56-201ENST00000624688 MARF1Q9Y4F3 1742 aaKnown RBP17.26■□□□□ 0.35
C3orf56-201ENST00000624688 CRBNQ96SW2 442 aa17.26■□□□□ 0.35
C3orf56-201ENST00000624688 USP54Q70EL1 1684 aa17.26■□□□□ 0.35
C3orf56-201ENST00000624688 BCAR3O75815 825 aa17.24■□□□□ 0.35
C3orf56-201ENST00000624688 HMOX1P09601 288 aa17.24■□□□□ 0.35
C3orf56-201ENST00000624688 RIPK4P57078 832 aa17.24■□□□□ 0.35
C3orf56-201ENST00000624688 PHACTR3Q96KR7 559 aa17.23■□□□□ 0.35
C3orf56-201ENST00000624688 MYH16Q9H6N6 1097 aa17.23■□□□□ 0.35
C3orf56-201ENST00000624688 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.22■□□□□ 0.35
C3orf56-201ENST00000624688 RGPD1P0DJD0 1748 aa17.22■□□□□ 0.35
C3orf56-201ENST00000624688 EIF4A2Q14240 407 aaKnown RBP17.21■□□□□ 0.35
C3orf56-201ENST00000624688 PHF8Q9UPP1 1060 aa17.21■□□□□ 0.35
C3orf56-201ENST00000624688 IL16Q14005 1332 aa17.21■□□□□ 0.35
C3orf56-201ENST00000624688 NFE2L2Q16236 605 aa17.2■□□□□ 0.34
C3orf56-201ENST00000624688 MAP3K19Q56UN5 1328 aa17.2■□□□□ 0.34
C3orf56-201ENST00000624688 FANCIQ9NVI1 1328 aa17.2■□□□□ 0.34
C3orf56-201ENST00000624688 RARSP54136 660 aaKnown RBP17.19■□□□□ 0.34
C3orf56-201ENST00000624688 HSP90AB2PQ58FF8 381 aa17.19■□□□□ 0.34
C3orf56-201ENST00000624688 SOX12O15370 315 aa17.18■□□□□ 0.34
C3orf56-201ENST00000624688 NEFMP07197 916 aa17.18■□□□□ 0.34
C3orf56-201ENST00000624688 NLRP6P59044 892 aa17.18■□□□□ 0.34
C3orf56-201ENST00000624688 TSR2Q969E8 191 aaKnown RBP17.18■□□□□ 0.34
C3orf56-201ENST00000624688 SBNO1A3KN83 1393 aa17.18■□□□□ 0.34
C3orf56-201ENST00000624688 DLG5Q8TDM6 1919 aa17.17■□□□□ 0.34
C3orf56-201ENST00000624688 STRCP1A6NGW2 1772 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms