RNA–Protein interactions for RNA: ENST00000623364.3

CDKL5-204, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 3

Gene CDKL5, Length 483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-204ENST00000623364 CASKIN1Q8WXD9 1431 aa10.67□□□□□ -0.7
CDKL5-204ENST00000623364 KANK1Q14678 1352 aa10.67□□□□□ -0.7
CDKL5-204ENST00000623364 PLSCR1O15162 318 aa10.67□□□□□ -0.7
CDKL5-204ENST00000623364 RGS19P49795 217 aa10.66□□□□□ -0.7
CDKL5-204ENST00000623364 CABLES1Q8TDN4 633 aa10.66□□□□□ -0.7
CDKL5-204ENST00000623364 RGPD3A6NKT7 1758 aaPredicted RBP10.66□□□□□ -0.7
CDKL5-204ENST00000623364 RGPD4Q7Z3J3 1758 aa10.66□□□□□ -0.7
CDKL5-204ENST00000623364 NRAPQ86VF7 1730 aa10.65□□□□□ -0.7
CDKL5-204ENST00000623364 PLEKHG5O94827 1062 aa10.65□□□□□ -0.7
CDKL5-204ENST00000623364 SLC15A2Q16348 729 aa10.64□□□□□ -0.71
CDKL5-204ENST00000623364 NLGN2Q8NFZ4 835 aa10.64□□□□□ -0.71
CDKL5-204ENST00000623364 ABHD8Q96I13 439 aa10.64□□□□□ -0.71
CDKL5-204ENST00000623364 GCC2Q8IWJ2 1684 aa10.63□□□□□ -0.71
CDKL5-204ENST00000623364 C11orf95C9JLR9 678 aaPredicted RBP10.63□□□□□ -0.71
CDKL5-204ENST00000623364 RBM46Q8TBY0 533 aaKnown RBP10.63□□□□□ -0.71
CDKL5-204ENST00000623364 POLD1P28340 1107 aa10.62□□□□□ -0.71
CDKL5-204ENST00000623364 PRDM10Q9NQV6 1147 aa10.62□□□□□ -0.71
CDKL5-204ENST00000623364 FSTL1Q12841 308 aa10.61□□□□□ -0.71
CDKL5-204ENST00000623364 ARHGEF5Q12774 1597 aa10.6□□□□□ -0.71
CDKL5-204ENST00000623364 RRBP1Q9P2E9 1410 aaKnown RBP10.6□□□□□ -0.71
CDKL5-204ENST00000623364 C16orf71Q8IYS4 520 aaPredicted RBP10.6□□□□□ -0.71
CDKL5-204ENST00000623364 SPATA31A1Q5TZJ5 1347 aa10.59□□□□□ -0.71
CDKL5-204ENST00000623364 DUOX2Q9NRD8 1548 aa10.59□□□□□ -0.71
CDKL5-204ENST00000623364 METP08581 1390 aa10.59□□□□□ -0.71
CDKL5-204ENST00000623364 CCDC144AA2RUR9 1427 aa10.58□□□□□ -0.72
CDKL5-204ENST00000623364 CCDC85CA6NKD9 419 aa10.58□□□□□ -0.72
CDKL5-204ENST00000623364 ARHGEF28Q8N1W1 1705 aaKnown RBP10.58□□□□□ -0.72
CDKL5-204ENST00000623364 LMTK2Q8IWU2 1503 aa10.58□□□□□ -0.72
CDKL5-204ENST00000623364 DHX57Q6P158 1386 aaKnown RBP10.57□□□□□ -0.72
CDKL5-204ENST00000623364 LMOD2Q6P5Q4 547 aa10.57□□□□□ -0.72
CDKL5-204ENST00000623364 PPP4R3CPQ6ZMV5 832 aa10.57□□□□□ -0.72
CDKL5-204ENST00000623364 KRT28Q7Z3Y7 464 aa10.57□□□□□ -0.72
CDKL5-204ENST00000623364 PROM2Q8N271 834 aa10.57□□□□□ -0.72
CDKL5-204ENST00000623364 COL14A1Q05707 1796 aaKnown RBP10.57□□□□□ -0.72
CDKL5-204ENST00000623364 TNS3Q68CZ2 1445 aa10.56□□□□□ -0.72
CDKL5-204ENST00000623364 TULP4Q9NRJ4 1543 aa10.55□□□□□ -0.72
CDKL5-204ENST00000623364 PSME1Q06323 249 aa10.55□□□□□ -0.72
CDKL5-204ENST00000623364 ABCA3Q99758 1704 aa10.55□□□□□ -0.72
CDKL5-204ENST00000623364 ARHGEF10O15013 1369 aa10.54□□□□□ -0.72
CDKL5-204ENST00000623364 UBTFP17480 764 aaKnown RBP10.54□□□□□ -0.72
CDKL5-204ENST00000623364 PMFBP1Q8TBY8 1022 aa10.54□□□□□ -0.72
CDKL5-204ENST00000623364 ERBINQ96RT1 1412 aa10.54□□□□□ -0.72
CDKL5-204ENST00000623364 FOXN1O15353 648 aa10.53□□□□□ -0.72
CDKL5-204ENST00000623364 TXNRD1Q16881 649 aa10.53□□□□□ -0.72
CDKL5-204ENST00000623364 BARGINQ6ZT62 677 aa10.53□□□□□ -0.72
CDKL5-204ENST00000623364 NRXN3Q9Y4C0 1643 aa10.53□□□□□ -0.72
CDKL5-204ENST00000623364 HOXD11P31277 338 aaPredicted RBP10.52□□□□□ -0.73
CDKL5-204ENST00000623364 CTCFP49711 727 aaPredicted RBP10.52□□□□□ -0.73
CDKL5-204ENST00000623364 SLC16A10Q8TF71 515 aa10.52□□□□□ -0.73
CDKL5-204ENST00000623364 NMRK2Q9NPI5 230 aa10.52□□□□□ -0.73
CDKL5-204ENST00000623364 USP35Q9P2H5 1018 aa10.52□□□□□ -0.73
CDKL5-204ENST00000623364 RNF39Q9H2S5 420 aa10.51□□□□□ -0.73
CDKL5-204ENST00000623364 TECPR2O15040 1411 aa10.5□□□□□ -0.73
CDKL5-204ENST00000623364 DLL1O00548 723 aa10.5□□□□□ -0.73
CDKL5-204ENST00000623364 AIDAQ96BJ3 306 aa10.5□□□□□ -0.73
CDKL5-204ENST00000623364 ROBO2Q9HCK4 1378 aa10.5□□□□□ -0.73
CDKL5-204ENST00000623364 OVOS2A0A0G2JMS6 1433 aa10.5□□□□□ -0.73
CDKL5-204ENST00000623364 OVOS2A0A0J9YW53 1432 aa10.5□□□□□ -0.73
CDKL5-204ENST00000623364 EEA1Q15075 1411 aa10.5□□□□□ -0.73
CDKL5-204ENST00000623364 OVOS2Q6IE36 1432 aa10.5□□□□□ -0.73
CDKL5-204ENST00000623364 CDC42BPGQ6DT37 1551 aa10.49□□□□□ -0.73
CDKL5-204ENST00000623364 NUTM2FA1L443 756 aa10.49□□□□□ -0.73
CDKL5-204ENST00000623364 STRN4Q9NRL3 753 aa10.49□□□□□ -0.73
CDKL5-204ENST00000623364 KIF15Q9NS87 1388 aa10.49□□□□□ -0.73
CDKL5-204ENST00000623364 PRAG1Q86YV5 1406 aa10.49□□□□□ -0.73
CDKL5-204ENST00000623364 PRPF38BQ5VTL8 546 aaKnown RBP10.48□□□□□ -0.73
CDKL5-204ENST00000623364 CFAP44Q96MT7 982 aa10.48□□□□□ -0.73
CDKL5-204ENST00000623364 PRDM11Q9NQV5 511 aa10.48□□□□□ -0.73
CDKL5-204ENST00000623364 SBNO1A3KN83 1393 aa10.48□□□□□ -0.73
CDKL5-204ENST00000623364 HFM1A2PYH4 1435 aa10.48□□□□□ -0.73
CDKL5-204ENST00000623364 KIF1AQ12756 1690 aa10.47□□□□□ -0.73
CDKL5-204ENST00000623364 TOPAZ1Q8N9V7 1692 aa10.47□□□□□ -0.73
CDKL5-204ENST00000623364 SMC1BQ8NDV3 1235 aa10.47□□□□□ -0.73
CDKL5-204ENST00000623364 TNRC18O15417 2968 aaPredicted RBP10.46□□□□□ -0.73
CDKL5-204ENST00000623364 PTF1AQ7RTS3 328 aa10.46□□□□□ -0.73
CDKL5-204ENST00000623364 CEP162Q5TB80 1403 aa10.46□□□□□ -0.74
CDKL5-204ENST00000623364 SBF2Q86WG5 1849 aa10.46□□□□□ -0.74
CDKL5-204ENST00000623364 LBX1P52954 281 aa10.45□□□□□ -0.74
CDKL5-204ENST00000623364 TCP11L2Q8N4U5 519 aa10.45□□□□□ -0.74
CDKL5-204ENST00000623364 RRP7BPQ9NSQ0 103 aa10.45□□□□□ -0.74
CDKL5-204ENST00000623364 EVA1CP58658 441 aa10.44□□□□□ -0.74
CDKL5-204ENST00000623364 CNKSR2Q8WXI2 1034 aa10.43□□□□□ -0.74
CDKL5-204ENST00000623364 COL24A1Q17RW2 1714 aa10.43□□□□□ -0.74
CDKL5-204ENST00000623364 PEAK1Q9H792 1746 aa10.42□□□□□ -0.74
CDKL5-204ENST00000623364 CD2APQ9Y5K6 639 aa10.42□□□□□ -0.74
CDKL5-204ENST00000623364 CUL9Q8IWT3 2517 aa10.42□□□□□ -0.74
CDKL5-204ENST00000623364 THRAP3Q9Y2W1 955 aaKnown RBP10.41□□□□□ -0.74
CDKL5-204ENST00000623364 IQGAP3Q86VI3 1631 aa10.4□□□□□ -0.74
CDKL5-204ENST00000623364 GCC1Q96CN9 775 aa10.4□□□□□ -0.74
CDKL5-204ENST00000623364 NAIPQ13075 1403 aa10.4□□□□□ -0.75
CDKL5-204ENST00000623364 PARP4Q9UKK3 1724 aaKnown RBP10.39□□□□□ -0.75
CDKL5-204ENST00000623364 ATP7BP35670 1465 aa10.39□□□□□ -0.75
CDKL5-204ENST00000623364 ZNF827Q17R98 1081 aa10.39□□□□□ -0.75
CDKL5-204ENST00000623364 RNF216Q9NWF9 866 aaPredicted RBP10.39□□□□□ -0.75
CDKL5-204ENST00000623364 PHF8Q9UPP1 1060 aa10.39□□□□□ -0.75
CDKL5-204ENST00000623364 PITPNM2Q9BZ72 1349 aa10.38□□□□□ -0.75
CDKL5-204ENST00000623364 ZNF326Q5BKZ1 582 aaKnown RBP10.38□□□□□ -0.75
CDKL5-204ENST00000623364 SSH2Q76I76 1423 aa10.38□□□□□ -0.75
CDKL5-204ENST00000623364 KDM2BQ8NHM5 1336 aa10.37□□□□□ -0.75
CDKL5-204ENST00000623364 CHRNA2Q15822 529 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms