RNA–Protein interactions for RNA: ENST00000622179.4

SIRPA-204, Transcript of signal regulatory protein alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SIRPA, Length 4,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-204ENST00000622179 MIS18AQ9NYP9 233 aa16.37■□□□□ 0.21
SIRPA-204ENST00000622179 SAMD9LQ8IVG5 1584 aa16.37■□□□□ 0.21
SIRPA-204ENST00000622179 CEBPAP49715 358 aaPredicted RBP16.37■□□□□ 0.21
SIRPA-204ENST00000622179 WASLO00401 505 aaPredicted RBP16.37■□□□□ 0.21
SIRPA-204ENST00000622179 FOXD4L6Q3SYB3 417 aaPredicted RBP16.37■□□□□ 0.21
SIRPA-204ENST00000622179 FOXD4L3Q6VB84 417 aaPredicted RBP16.37■□□□□ 0.21
SIRPA-204ENST00000622179 MAST1Q9Y2H9 1570 aa16.37■□□□□ 0.21
SIRPA-204ENST00000622179 ARHGEF5Q12774 1597 aa16.36■□□□□ 0.21
SIRPA-204ENST00000622179 DMRT2Q9Y5R5 561 aa16.36■□□□□ 0.21
SIRPA-204ENST00000622179 MCM10Q7L590 875 aa16.36■□□□□ 0.21
SIRPA-204ENST00000622179 CFAP65Q6ZU64 1925 aaKnown RBP16.35■□□□□ 0.21
SIRPA-204ENST00000622179 RNF123Q5XPI4 1314 aa16.35■□□□□ 0.21
SIRPA-204ENST00000622179 DDX11L8A8MPP1 907 aa16.34■□□□□ 0.21
SIRPA-204ENST00000622179 CHD1LQ86WJ1 897 aa16.34■□□□□ 0.21
SIRPA-204ENST00000622179 PCDHB15Q9Y5E8 787 aa16.34■□□□□ 0.21
SIRPA-204ENST00000622179 KDM5CP41229 1560 aa16.34■□□□□ 0.21
SIRPA-204ENST00000622179 C9orf78Q9NZ63 289 aaPredicted RBP16.34■□□□□ 0.21
SIRPA-204ENST00000622179 ANKRD36BQ8N2N9 1353 aa16.34■□□□□ 0.21
SIRPA-204ENST00000622179 REC8O95072 547 aa16.34■□□□□ 0.21
SIRPA-204ENST00000622179 GCC1Q96CN9 775 aa16.34■□□□□ 0.21
SIRPA-204ENST00000622179 ESCO1Q5FWF5 840 aa16.33■□□□□ 0.21
SIRPA-204ENST00000622179 DDX49Q9Y6V7 483 aaKnown RBP16.33■□□□□ 0.21
SIRPA-204ENST00000622179 LRRIQ1Q96JM4 1722 aa16.33■□□□□ 0.21
SIRPA-204ENST00000622179 DNTTIP2Q5QJE6 756 aaKnown RBP16.33■□□□□ 0.2
SIRPA-204ENST00000622179 ANO2Q9NQ90 1003 aa16.33■□□□□ 0.2
SIRPA-204ENST00000622179 PIK3C2GO75747 1445 aa16.33■□□□□ 0.2
SIRPA-204ENST00000622179 CDC45O75419 566 aa16.33■□□□□ 0.2
SIRPA-204ENST00000622179 THEMISQ8N1K5 641 aaPredicted RBP16.33■□□□□ 0.2
SIRPA-204ENST00000622179 CCDC9Q9Y3X0 531 aaKnown RBP16.33■□□□□ 0.2
SIRPA-204ENST00000622179 POLR3AO14802 1390 aaPredicted RBP16.33■□□□□ 0.2
SIRPA-204ENST00000622179 ATP7AQ04656 1500 aa16.33■□□□□ 0.2
SIRPA-204ENST00000622179 GAS2L2Q8NHY3 880 aa16.33■□□□□ 0.2
SIRPA-204ENST00000622179 GOLGA6L4A6NEF3 574 aa16.32■□□□□ 0.2
SIRPA-204ENST00000622179 INTS3Q68E01 1043 aaKnown RBP16.32■□□□□ 0.2
SIRPA-204ENST00000622179 FAM83GA6ND36 823 aa16.32■□□□□ 0.2
SIRPA-204ENST00000622179 RLBP1P12271 317 aa16.32■□□□□ 0.2
SIRPA-204ENST00000622179 GPATCH3Q96I76 525 aa16.32■□□□□ 0.2
SIRPA-204ENST00000622179 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.31■□□□□ 0.2
SIRPA-204ENST00000622179 TTC37Q6PGP7 1564 aa16.31■□□□□ 0.2
SIRPA-204ENST00000622179 ZRANB1Q9UGI0 708 aa16.31■□□□□ 0.2
SIRPA-204ENST00000622179 NSD2O96028 1365 aa16.31■□□□□ 0.2
SIRPA-204ENST00000622179 PLA2R1Q13018 1463 aa16.31■□□□□ 0.2
SIRPA-204ENST00000622179 HDAC5Q9UQL6 1122 aa16.31■□□□□ 0.2
SIRPA-204ENST00000622179 PTMSP20962 102 aa16.31■□□□□ 0.2
SIRPA-204ENST00000622179 RBM33Q96EV2 1170 aaKnown RBP16.3■□□□□ 0.2
SIRPA-204ENST00000622179 UBTFL1P0CB47 393 aaPredicted RBP16.29■□□□□ 0.2
SIRPA-204ENST00000622179 AIMP1Q12904 312 aaKnown RBP16.29■□□□□ 0.2
SIRPA-204ENST00000622179 CCDC30Q5VVM6 783 aa16.29■□□□□ 0.2
SIRPA-204ENST00000622179 ZNF428Q96B54 188 aa16.29■□□□□ 0.2
SIRPA-204ENST00000622179 ABCC11Q96J66 1382 aa16.29■□□□□ 0.2
SIRPA-204ENST00000622179 MAGI2Q86UL8 1455 aa16.28■□□□□ 0.2
SIRPA-204ENST00000622179 IFT57Q9NWB7 429 aa16.27■□□□□ 0.2
SIRPA-204ENST00000622179 NCKAP5LQ9HCH0 1330 aa16.27■□□□□ 0.2
SIRPA-204ENST00000622179 MSNP26038 577 aaKnown RBP16.27■□□□□ 0.2
SIRPA-204ENST00000622179 ALDH1L2Q3SY69 923 aa16.27■□□□□ 0.2
SIRPA-204ENST00000622179 A0A1W2PP64 1363 aa16.27■□□□□ 0.19
SIRPA-204ENST00000622179 ZRSR1Q15695 479 aaKnown RBP16.27■□□□□ 0.19
SIRPA-204ENST00000622179 ERCC6L2Q5T890 1561 aa16.27■□□□□ 0.19
SIRPA-204ENST00000622179 ATP10AO60312 1499 aa16.27■□□□□ 0.19
SIRPA-204ENST00000622179 NLRP2Q9NX02 1062 aa16.26■□□□□ 0.19
SIRPA-204ENST00000622179 BRPF3Q9ULD4 1205 aa16.26■□□□□ 0.19
SIRPA-204ENST00000622179 AMOTL2Q9Y2J4 779 aa16.26■□□□□ 0.19
SIRPA-204ENST00000622179 CDC42BPAQ5VT25 1732 aa16.26■□□□□ 0.19
SIRPA-204ENST00000622179 XPCQ01831 940 aaPredicted RBP16.26■□□□□ 0.19
SIRPA-204ENST00000622179 HDGFL1Q5TGJ6 251 aa16.26■□□□□ 0.19
SIRPA-204ENST00000622179 POLKQ9UBT6 870 aa16.26■□□□□ 0.19
SIRPA-204ENST00000622179 SURF6O75683 361 aaKnown RBP16.26■□□□□ 0.19
SIRPA-204ENST00000622179 MYO5CQ9NQX4 1742 aa16.26■□□□□ 0.19
SIRPA-204ENST00000622179 GNAI3P08754 354 aa16.25■□□□□ 0.19
SIRPA-204ENST00000622179 MBIPQ9NS73 344 aa16.25■□□□□ 0.19
SIRPA-204ENST00000622179 DIAPH3Q9NSV4 1193 aa16.25■□□□□ 0.19
SIRPA-204ENST00000622179 C8orf34Q49A92 452 aa16.25■□□□□ 0.19
SIRPA-204ENST00000622179 GNAI2P04899 355 aa16.25■□□□□ 0.19
SIRPA-204ENST00000622179 CCDC27Q2M243 656 aa16.24■□□□□ 0.19
SIRPA-204ENST00000622179 GORABQ5T7V8 394 aa16.24■□□□□ 0.19
SIRPA-204ENST00000622179 NEXNQ0ZGT2 675 aa16.24■□□□□ 0.19
SIRPA-204ENST00000622179 NPC1L1Q9UHC9 1359 aa16.24■□□□□ 0.19
SIRPA-204ENST00000622179 TTC5Q8N0Z6 440 aa16.24■□□□□ 0.19
SIRPA-204ENST00000622179 IFIT2P09913 472 aaKnown RBP16.23■□□□□ 0.19
SIRPA-204ENST00000622179 IL27Q8NEV9 243 aa16.23■□□□□ 0.19
SIRPA-204ENST00000622179 RAPGEF4Q8WZA2 1011 aa16.23■□□□□ 0.19
SIRPA-204ENST00000622179 BLMP54132 1417 aaPredicted RBP16.23■□□□□ 0.19
SIRPA-204ENST00000622179 F6X3S4 739 aa16.23■□□□□ 0.19
SIRPA-204ENST00000622179 PHACTR3Q96KR7 559 aa16.23■□□□□ 0.19
SIRPA-204ENST00000622179 ACEP12821 1306 aa16.23■□□□□ 0.19
SIRPA-204ENST00000622179 TRAK2O60296 914 aa16.23■□□□□ 0.19
SIRPA-204ENST00000622179 PREX2Q70Z35 1606 aa16.22■□□□□ 0.19
SIRPA-204ENST00000622179 BCORL1Q5H9F3 1711 aa16.22■□□□□ 0.19
SIRPA-204ENST00000622179 UGGT1Q9NYU2 1555 aa16.22■□□□□ 0.19
SIRPA-204ENST00000622179 HSP90AB2PQ58FF8 381 aa16.22■□□□□ 0.19
SIRPA-204ENST00000622179 USHBP1Q8N6Y0 703 aa16.22■□□□□ 0.19
SIRPA-204ENST00000622179 ZMYM4Q5VZL5 1548 aa16.22■□□□□ 0.19
SIRPA-204ENST00000622179 SMARCA5O60264 1052 aaPredicted RBP16.22■□□□□ 0.19
SIRPA-204ENST00000622179 SKOR2Q2VWA4 1001 aaPredicted RBP16.21■□□□□ 0.19
SIRPA-204ENST00000622179 MCTP1Q6DN14 999 aa16.21■□□□□ 0.19
SIRPA-204ENST00000622179 AEBP1Q8IUX7 1158 aa16.21■□□□□ 0.19
SIRPA-204ENST00000622179 EXOC6BQ9Y2D4 811 aa16.21■□□□□ 0.19
SIRPA-204ENST00000622179 NPATQ14207 1427 aa16.21■□□□□ 0.19
SIRPA-204ENST00000622179 TAF7LQ5H9L4 462 aa16.21■□□□□ 0.19
SIRPA-204ENST00000622179 PTPRTO14522 1441 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms