RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 PPRC1Q5VV67 1664 aaKnown RBP19.79■□□□□ 0.76
NPHP4-211ENST00000622020 EFCAB6Q5THR3 1501 aa19.79■□□□□ 0.76
NPHP4-211ENST00000622020 DIAPH1O60610 1272 aaKnown RBP19.79■□□□□ 0.76
NPHP4-211ENST00000622020 RAPGEF3O95398 923 aa19.79■□□□□ 0.76
NPHP4-211ENST00000622020 CD2BP2O95400 341 aaKnown RBP19.79■□□□□ 0.76
NPHP4-211ENST00000622020 QRICH2Q9H0J4 1663 aa19.78■□□□□ 0.76
NPHP4-211ENST00000622020 VGFO15240 615 aaPredicted RBP19.78■□□□□ 0.76
NPHP4-211ENST00000622020 CHD1LQ86WJ1 897 aa19.78■□□□□ 0.76
NPHP4-211ENST00000622020 PRAM1Q96QH2 718 aa19.78■□□□□ 0.76
NPHP4-211ENST00000622020 TNPO1Q92973 898 aaKnown RBP19.78■□□□□ 0.76
NPHP4-211ENST00000622020 FSD2A1L4K1 749 aa19.77■□□□□ 0.76
NPHP4-211ENST00000622020 PRKAR2BP31323 418 aa19.77■□□□□ 0.76
NPHP4-211ENST00000622020 IPO8O15397 1037 aaKnown RBP19.76■□□□□ 0.75
NPHP4-211ENST00000622020 IDI1Q13907 227 aa19.76■□□□□ 0.75
NPHP4-211ENST00000622020 TSPYL6Q8N831 410 aa19.76■□□□□ 0.75
NPHP4-211ENST00000622020 INO80Q9ULG1 1556 aaPredicted RBP19.76■□□□□ 0.75
NPHP4-211ENST00000622020 NRXN1Q9ULB1 1477 aa19.76■□□□□ 0.75
NPHP4-211ENST00000622020 NUCB1Q02818 461 aa19.76■□□□□ 0.75
NPHP4-211ENST00000622020 CABP1Q9NZU7 370 aa19.76■□□□□ 0.75
NPHP4-211ENST00000622020 ZNF692Q9BU19 519 aaPredicted RBP19.75■□□□□ 0.75
NPHP4-211ENST00000622020 UHRF1BP1LA0JNW5 1464 aa19.75■□□□□ 0.75
NPHP4-211ENST00000622020 PHACTR3Q96KR7 559 aa19.75■□□□□ 0.75
NPHP4-211ENST00000622020 PNNQ9H307 717 aaKnown RBP19.75■□□□□ 0.75
NPHP4-211ENST00000622020 GRPEL1Q9HAV7 217 aa19.74■□□□□ 0.75
NPHP4-211ENST00000622020 ADGRB1O14514 1584 aa19.74■□□□□ 0.75
NPHP4-211ENST00000622020 APBB1O00213 710 aa19.73■□□□□ 0.75
NPHP4-211ENST00000622020 GAS2L3Q86XJ1 694 aa19.73■□□□□ 0.75
NPHP4-211ENST00000622020 CT47B1P0C2W7 299 aaPredicted RBP19.73■□□□□ 0.75
NPHP4-211ENST00000622020 KIF16BQ96L93 1317 aa19.72■□□□□ 0.75
NPHP4-211ENST00000622020 TULP4Q9NRJ4 1543 aa19.72■□□□□ 0.75
NPHP4-211ENST00000622020 TERF2IPQ9NYB0 399 aa19.72■□□□□ 0.75
NPHP4-211ENST00000622020 ADGRB3O60242 1522 aa19.72■□□□□ 0.75
NPHP4-211ENST00000622020 ATAD2Q6PL18 1390 aa19.72■□□□□ 0.75
NPHP4-211ENST00000622020 ASXL2Q76L83 1435 aa19.72■□□□□ 0.75
NPHP4-211ENST00000622020 MRE11P49959 708 aa19.71■□□□□ 0.75
NPHP4-211ENST00000622020 DDX11L8A8MPP1 907 aa19.7■□□□□ 0.74
NPHP4-211ENST00000622020 MYO3AQ8NEV4 1616 aa19.7■□□□□ 0.74
NPHP4-211ENST00000622020 TBC1D9Q6ZT07 1266 aa19.7■□□□□ 0.74
NPHP4-211ENST00000622020 IFT172Q9UG01 1749 aa19.69■□□□□ 0.74
NPHP4-211ENST00000622020 NPM1P06748 294 aaKnown RBP eCLIP19.69■□□□□ 0.74
NPHP4-211ENST00000622020 RBM25P49756 843 aaKnown RBP19.69■□□□□ 0.74
NPHP4-211ENST00000622020 ZMYM3Q14202 1370 aa19.69■□□□□ 0.74
NPHP4-211ENST00000622020 ZBTB7BO15156 539 aaPredicted RBP19.68■□□□□ 0.74
NPHP4-211ENST00000622020 DCTN1Q14203 1278 aa19.68■□□□□ 0.74
NPHP4-211ENST00000622020 KIF2CQ99661 725 aa19.68■□□□□ 0.74
NPHP4-211ENST00000622020 CDK19Q9BWU1 502 aa19.68■□□□□ 0.74
NPHP4-211ENST00000622020 RPGRIP1LQ68CZ1 1315 aa19.68■□□□□ 0.74
NPHP4-211ENST00000622020 KIDINS220Q9ULH0 1771 aa19.68■□□□□ 0.74
NPHP4-211ENST00000622020 FAM83GA6ND36 823 aa19.68■□□□□ 0.74
NPHP4-211ENST00000622020 SSFA2P28290 1259 aa19.68■□□□□ 0.74
NPHP4-211ENST00000622020 ABCC11Q96J66 1382 aa19.67■□□□□ 0.74
NPHP4-211ENST00000622020 HDGFL2Q7Z4V5 671 aaPredicted RBP19.67■□□□□ 0.74
NPHP4-211ENST00000622020 NSD2O96028 1365 aa19.67■□□□□ 0.74
NPHP4-211ENST00000622020 SETBP1Q9Y6X0 1596 aa19.67■□□□□ 0.74
NPHP4-211ENST00000622020 ERBB4Q15303 1308 aa19.67■□□□□ 0.74
NPHP4-211ENST00000622020 SIRT2Q8IXJ6 389 aa19.67■□□□□ 0.74
NPHP4-211ENST00000622020 EMILIN1Q9Y6C2 1016 aa19.67■□□□□ 0.74
NPHP4-211ENST00000622020 WAPLQ7Z5K2 1190 aa19.66■□□□□ 0.74
NPHP4-211ENST00000622020 ZRANB1Q9UGI0 708 aa19.66■□□□□ 0.74
NPHP4-211ENST00000622020 ABCA9Q8IUA7 1624 aa19.66■□□□□ 0.74
NPHP4-211ENST00000622020 C16orf71Q8IYS4 520 aaPredicted RBP19.66■□□□□ 0.74
NPHP4-211ENST00000622020 GAS2L2Q8NHY3 880 aa19.66■□□□□ 0.74
NPHP4-211ENST00000622020 TRIM44Q96DX7 344 aaPredicted RBP19.66■□□□□ 0.74
NPHP4-211ENST00000622020 GLI2P10070 1586 aa19.66■□□□□ 0.74
NPHP4-211ENST00000622020 VAMP4O75379 141 aa19.65■□□□□ 0.74
NPHP4-211ENST00000622020 PPIP5K1Q6PFW1 1433 aa19.65■□□□□ 0.74
NPHP4-211ENST00000622020 NCLP19338 710 aaKnown RBP19.65■□□□□ 0.74
NPHP4-211ENST00000622020 BMP2KLQ5H9B9 411 aa19.65■□□□□ 0.74
NPHP4-211ENST00000622020 GBP4Q96PP9 640 aa19.65■□□□□ 0.74
NPHP4-211ENST00000622020 STAG3Q9UJ98 1225 aa19.65■□□□□ 0.74
NPHP4-211ENST00000622020 ARAP3Q8WWN8 1544 aa19.65■□□□□ 0.74
NPHP4-211ENST00000622020 FBXO31Q5XUX0 539 aaPredicted RBP19.64■□□□□ 0.73
NPHP4-211ENST00000622020 POLKQ9UBT6 870 aa19.64■□□□□ 0.73
NPHP4-211ENST00000622020 DDIT3P35638 169 aa19.63■□□□□ 0.73
NPHP4-211ENST00000622020 MRPL50Q8N5N7 158 aaKnown RBP19.63■□□□□ 0.73
NPHP4-211ENST00000622020 C8orf58Q8NAV2 365 aa19.63■□□□□ 0.73
NPHP4-211ENST00000622020 MBIPQ9NS73 344 aa19.63■□□□□ 0.73
NPHP4-211ENST00000622020 IL16Q14005 1332 aa19.63■□□□□ 0.73
NPHP4-211ENST00000622020 FCHSD2O94868 740 aa19.62■□□□□ 0.73
NPHP4-211ENST00000622020 CLCN1P35523 988 aa19.62■□□□□ 0.73
NPHP4-211ENST00000622020 ALDH1L2Q3SY69 923 aa19.62■□□□□ 0.73
NPHP4-211ENST00000622020 SNX21Q969T3 373 aa19.62■□□□□ 0.73
NPHP4-211ENST00000622020 PPLO60437 1756 aa19.62■□□□□ 0.73
NPHP4-211ENST00000622020 ESPNB1AK53 854 aa19.62■□□□□ 0.73
NPHP4-211ENST00000622020 K7ELQ4 463 aaPredicted RBP19.62■□□□□ 0.73
NPHP4-211ENST00000622020 RAB3GAP1Q15042 981 aa19.62■□□□□ 0.73
NPHP4-211ENST00000622020 NEURL4Q96JN8 1562 aa19.62■□□□□ 0.73
NPHP4-211ENST00000622020 ADGRB2O60241 1585 aa19.62■□□□□ 0.73
NPHP4-211ENST00000622020 KRT24Q2M2I5 525 aa19.61■□□□□ 0.73
NPHP4-211ENST00000622020 TWISTNBQ3B726 338 aaPredicted RBP19.61■□□□□ 0.73
NPHP4-211ENST00000622020 ZC3H13Q5T200 1668 aaKnown RBP19.61■□□□□ 0.73
NPHP4-211ENST00000622020 RRS1Q15050 365 aaKnown RBP19.61■□□□□ 0.73
NPHP4-211ENST00000622020 OSCARQ8IYS5 282 aa19.6■□□□□ 0.73
NPHP4-211ENST00000622020 OTUD7AQ8TE49 926 aaPredicted RBP19.6■□□□□ 0.73
NPHP4-211ENST00000622020 NCKAP5LQ9HCH0 1330 aa19.6■□□□□ 0.73
NPHP4-211ENST00000622020 DDX49Q9Y6V7 483 aaKnown RBP19.6■□□□□ 0.73
NPHP4-211ENST00000622020 CAMSAP1Q5T5Y3 1602 aa19.59■□□□□ 0.73
NPHP4-211ENST00000622020 GCC1Q96CN9 775 aa19.59■□□□□ 0.73
NPHP4-211ENST00000622020 GSPT1P15170 499 aaKnown RBP19.59■□□□□ 0.73
NPHP4-211ENST00000622020 NFE2L2Q16236 605 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms