RNA–Protein interactions for RNA: ENST00000621936.1

PCCA-210, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

Gene PCCA, Length 1,850 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-210ENST00000621936 U2AF1Q01081 240 aaKnown RBP eCLIP15.08■□□□□ 0
PCCA-210ENST00000621936 PLEKHF1Q96S99 279 aa15.08■□□□□ 0
PCCA-210ENST00000621936 CANXP27824 592 aaKnown RBP15.07■□□□□ 0
PCCA-210ENST00000621936 TNNT2P45379 298 aaPredicted RBP15.07■□□□□ 0
PCCA-210ENST00000621936 C8orf34Q49A92 452 aa15.07■□□□□ 0
PCCA-210ENST00000621936 SAFB2Q14151 953 aaKnown RBP eCLIP15.06■□□□□ 0
PCCA-210ENST00000621936 VIRMAQ69YN4 1812 aaKnown RBP15.05■□□□□ 0
PCCA-210ENST00000621936 MINK1Q8N4C8 1332 aaPredicted RBP15.05■□□□□ -0
PCCA-210ENST00000621936 CDK19Q9BWU1 502 aa15.05■□□□□ -0
PCCA-210ENST00000621936 NPM2Q86SE8 214 aaKnown RBP15.04■□□□□ -0
PCCA-210ENST00000621936 TMPOP42166 694 aaKnown RBP15.03■□□□□ -0
PCCA-210ENST00000621936 RTL5Q5HYW3 569 aaPredicted RBP15.03■□□□□ -0
PCCA-210ENST00000621936 KNDC1Q76NI1 1749 aa15.03■□□□□ -0
PCCA-210ENST00000621936 FAM135BQ49AJ0 1406 aa15.02■□□□□ -0
PCCA-210ENST00000621936 DIAPH1O60610 1272 aaKnown RBP15.02■□□□□ -0
PCCA-210ENST00000621936 FCHSD2O94868 740 aa15.02■□□□□ -0
PCCA-210ENST00000621936 IGHDP01880 384 aa15.02■□□□□ -0
PCCA-210ENST00000621936 MLECQ14165 292 aa15.02■□□□□ -0
PCCA-210ENST00000621936 ZNF428Q96B54 188 aa15.02■□□□□ -0
PCCA-210ENST00000621936 RRP7AQ9Y3A4 280 aaKnown RBP15.02■□□□□ -0
PCCA-210ENST00000621936 NEUROD2Q15784 382 aa15.01□□□□□ -0.01
PCCA-210ENST00000621936 GGNBP2Q9H3C7 697 aa15.01□□□□□ -0.01
PCCA-210ENST00000621936 COG6Q9Y2V7 657 aa15.01□□□□□ -0.01
PCCA-210ENST00000621936 TECPR2O15040 1411 aa15.01□□□□□ -0.01
PCCA-210ENST00000621936 ZKSCAN2Q63HK3 967 aa15.01□□□□□ -0.01
PCCA-210ENST00000621936 PANK1Q8TE04 598 aa15.01□□□□□ -0.01
PCCA-210ENST00000621936 RWDD1Q9H446 243 aaPredicted RBP15.01□□□□□ -0.01
PCCA-210ENST00000621936 TRIM35Q9UPQ4 493 aa15□□□□□ -0.01
PCCA-210ENST00000621936 TNRQ92752 1358 aa15□□□□□ -0.01
PCCA-210ENST00000621936 CPSF1Q10570 1443 aaKnown RBP15□□□□□ -0.01
PCCA-210ENST00000621936 EDC4Q6P2E9 1401 aaKnown RBP15□□□□□ -0.01
PCCA-210ENST00000621936 PPIP5K1Q6PFW1 1433 aa14.99□□□□□ -0.01
PCCA-210ENST00000621936 AATKQ6ZMQ8 1374 aa14.99□□□□□ -0.01
PCCA-210ENST00000621936 BRPF1P55201 1214 aaPredicted RBP14.99□□□□□ -0.01
PCCA-210ENST00000621936 MVPQ14764 893 aaKnown RBP14.99□□□□□ -0.01
PCCA-210ENST00000621936 NRXN3Q9Y4C0 1643 aa14.99□□□□□ -0.01
PCCA-210ENST00000621936 DEKP35659 375 aaKnown RBP14.98□□□□□ -0.01
PCCA-210ENST00000621936 FRAT1Q92837 279 aaPredicted RBP14.98□□□□□ -0.01
PCCA-210ENST00000621936 CABP1Q9NZU7 370 aa14.98□□□□□ -0.01
PCCA-210ENST00000621936 ALDH1L2Q3SY69 923 aa14.97□□□□□ -0.01
PCCA-210ENST00000621936 SKAP1Q86WV1 359 aa14.97□□□□□ -0.01
PCCA-210ENST00000621936 DZIP1LQ8IYY4 767 aaKnown RBP14.97□□□□□ -0.01
PCCA-210ENST00000621936 U2SURPO15042 1029 aaKnown RBP14.97□□□□□ -0.01
PCCA-210ENST00000621936 CALD1Q05682 793 aaKnown RBP14.97□□□□□ -0.01
PCCA-210ENST00000621936 CPS1P31327 1500 aa14.96□□□□□ -0.01
PCCA-210ENST00000621936 RGS3P49796 1198 aa14.96□□□□□ -0.01
PCCA-210ENST00000621936 WASLO00401 505 aaPredicted RBP14.95□□□□□ -0.02
PCCA-210ENST00000621936 NBR1Q14596 966 aa14.95□□□□□ -0.02
PCCA-210ENST00000621936 DAXXQ9UER7 740 aaPredicted RBP14.95□□□□□ -0.02
PCCA-210ENST00000621936 CDK12Q9NYV4 1490 aaPredicted RBP14.95□□□□□ -0.02
PCCA-210ENST00000621936 IPO8O15397 1037 aaKnown RBP14.95□□□□□ -0.02
PCCA-210ENST00000621936 NEFMP07197 916 aa14.95□□□□□ -0.02
PCCA-210ENST00000621936 RLBP1P12271 317 aa14.95□□□□□ -0.02
PCCA-210ENST00000621936 DDX19BQ9UMR2 479 aa14.95□□□□□ -0.02
PCCA-210ENST00000621936 KIF16BQ96L93 1317 aa14.95□□□□□ -0.02
PCCA-210ENST00000621936 UBR1Q8IWV7 1749 aa14.94□□□□□ -0.02
PCCA-210ENST00000621936 RIPK4P57078 832 aa14.94□□□□□ -0.02
PCCA-210ENST00000621936 HDAC1Q13547 482 aaPredicted RBP14.94□□□□□ -0.02
PCCA-210ENST00000621936 POLKQ9UBT6 870 aa14.94□□□□□ -0.02
PCCA-210ENST00000621936 PCDHB15Q9Y5E8 787 aa14.94□□□□□ -0.02
PCCA-210ENST00000621936 TMEM2Q9UHN6 1383 aa14.94□□□□□ -0.02
PCCA-210ENST00000621936 MON2Q7Z3U7 1717 aa14.94□□□□□ -0.02
PCCA-210ENST00000621936 EXOSC9Q06265 439 aaKnown RBP14.93□□□□□ -0.02
PCCA-210ENST00000621936 WAPLQ7Z5K2 1190 aa14.93□□□□□ -0.02
PCCA-210ENST00000621936 ZNF692Q9BU19 519 aaPredicted RBP14.93□□□□□ -0.02
PCCA-210ENST00000621936 RSPH6AQ9H0K4 717 aa14.93□□□□□ -0.02
PCCA-210ENST00000621936 LRRC7Q96NW7 1537 aa14.93□□□□□ -0.02
PCCA-210ENST00000621936 ATF7IPQ6VMQ6 1270 aa14.93□□□□□ -0.02
PCCA-210ENST00000621936 CHMP4BQ9H444 224 aaKnown RBP14.93□□□□□ -0.02
PCCA-210ENST00000621936 FTSJ3Q8IY81 847 aaKnown RBP14.92□□□□□ -0.02
PCCA-210ENST00000621936 SMC4Q9NTJ3 1288 aa14.92□□□□□ -0.02
PCCA-210ENST00000621936 METP08581 1390 aa14.92□□□□□ -0.02
PCCA-210ENST00000621936 AKAP12Q02952 1782 aa14.92□□□□□ -0.02
PCCA-210ENST00000621936 NFE2L2Q16236 605 aa14.91□□□□□ -0.02
PCCA-210ENST00000621936 PDZRN3Q9UPQ7 1066 aa14.91□□□□□ -0.02
PCCA-210ENST00000621936 MAP2P11137 1827 aaKnown RBP14.9□□□□□ -0.02
PCCA-210ENST00000621936 USP19O94966 1318 aa14.9□□□□□ -0.02
PCCA-210ENST00000621936 LMOD3Q0VAK6 560 aa14.9□□□□□ -0.02
PCCA-210ENST00000621936 SSH1Q8WYL5 1049 aa14.9□□□□□ -0.02
PCCA-210ENST00000621936 ARHGAP45Q92619 1136 aa14.9□□□□□ -0.02
PCCA-210ENST00000621936 CCDC61Q9Y6R9 512 aa14.9□□□□□ -0.02
PCCA-210ENST00000621936 PLEKHG1Q9ULL1 1385 aa14.89□□□□□ -0.03
PCCA-210ENST00000621936 TSR2Q969E8 191 aaKnown RBP14.89□□□□□ -0.03
PCCA-210ENST00000621936 C3P01024 1663 aa14.89□□□□□ -0.03
PCCA-210ENST00000621936 TRIM27P14373 513 aa14.89□□□□□ -0.03
PCCA-210ENST00000621936 IL13P35225 146 aa14.89□□□□□ -0.03
PCCA-210ENST00000621936 TXNDC2Q86VQ3 553 aa14.88□□□□□ -0.03
PCCA-210ENST00000621936 NUDT16Q96DE0 195 aaKnown RBP14.88□□□□□ -0.03
PCCA-210ENST00000621936 IFT57Q9NWB7 429 aa14.88□□□□□ -0.03
PCCA-210ENST00000621936 ITSN1Q15811 1721 aa14.88□□□□□ -0.03
PCCA-210ENST00000621936 GNAI1P63096 354 aa14.87□□□□□ -0.03
PCCA-210ENST00000621936 BECN1Q14457 450 aa14.87□□□□□ -0.03
PCCA-210ENST00000621936 BCL2L13Q9BXK5 485 aa14.87□□□□□ -0.03
PCCA-210ENST00000621936 UPF2Q9HAU5 1272 aaKnown RBP14.87□□□□□ -0.03
PCCA-210ENST00000621936 TNNQ9UQP3 1299 aa14.87□□□□□ -0.03
PCCA-210ENST00000621936 PIK3R4Q99570 1358 aa14.87□□□□□ -0.03
PCCA-210ENST00000621936 PRKAR2BP31323 418 aa14.86□□□□□ -0.03
PCCA-210ENST00000621936 SMC5Q8IY18 1101 aa14.86□□□□□ -0.03
PCCA-210ENST00000621936 ZNF853P0CG23 659 aa14.86□□□□□ -0.03
PCCA-210ENST00000621936 COG3Q96JB2 828 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms