RNA–Protein interactions for RNA: ENST00000621176.1

TRIM6-212, Transcript of tripartite motif containing 6, humanhuman

TSL 5 BASIC

Gene TRIM6, Length 3,005 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-212ENST00000621176 PANK2Q9BZ23 570 aa11.08□□□□□ -0.64
TRIM6-212ENST00000621176 CHMP5Q9NZZ3 219 aa11.08□□□□□ -0.64
TRIM6-212ENST00000621176 GLI2P10070 1586 aa11.08□□□□□ -0.64
TRIM6-212ENST00000621176 ZBTB40Q9NUA8 1239 aa11.08□□□□□ -0.64
TRIM6-212ENST00000621176 RPGRIP1LQ68CZ1 1315 aa11.08□□□□□ -0.64
TRIM6-212ENST00000621176 A0A1W2PP64 1363 aa11.08□□□□□ -0.64
TRIM6-212ENST00000621176 GOLGA6L3A6NEY3 463 aa11.07□□□□□ -0.64
TRIM6-212ENST00000621176 RSPH6AQ9H0K4 717 aa11.07□□□□□ -0.64
TRIM6-212ENST00000621176 ASXL2Q76L83 1435 aa11.06□□□□□ -0.64
TRIM6-212ENST00000621176 TRAK2O60296 914 aa11.06□□□□□ -0.64
TRIM6-212ENST00000621176 ZNF692Q9BU19 519 aaPredicted RBP11.06□□□□□ -0.64
TRIM6-212ENST00000621176 ABCC11Q96J66 1382 aa11.06□□□□□ -0.64
TRIM6-212ENST00000621176 ARHGEF28Q8N1W1 1705 aaKnown RBP11.06□□□□□ -0.64
TRIM6-212ENST00000621176 RIPK4P57078 832 aa11.06□□□□□ -0.64
TRIM6-212ENST00000621176 COL3A1P02461 1466 aaPredicted RBP11.05□□□□□ -0.64
TRIM6-212ENST00000621176 FRMPD1Q5SYB0 1578 aa11.05□□□□□ -0.64
TRIM6-212ENST00000621176 FYB1O15117 783 aa11.05□□□□□ -0.64
TRIM6-212ENST00000621176 VGFO15240 615 aaPredicted RBP11.05□□□□□ -0.64
TRIM6-212ENST00000621176 STK26Q9P289 416 aa11.05□□□□□ -0.64
TRIM6-212ENST00000621176 SRPK2P78362 688 aaKnown RBP11.05□□□□□ -0.64
TRIM6-212ENST00000621176 LNPKQ9C0E8 428 aa11.05□□□□□ -0.64
TRIM6-212ENST00000621176 NUCB1Q02818 461 aa11.04□□□□□ -0.64
TRIM6-212ENST00000621176 HSCBQ8IWL3 235 aa11.04□□□□□ -0.64
TRIM6-212ENST00000621176 IL16Q14005 1332 aa11.04□□□□□ -0.64
TRIM6-212ENST00000621176 DDIT3P35638 169 aa11.03□□□□□ -0.64
TRIM6-212ENST00000621176 RBM25P49756 843 aaKnown RBP11.03□□□□□ -0.64
TRIM6-212ENST00000621176 CAMSAP1Q5T5Y3 1602 aa11.03□□□□□ -0.64
TRIM6-212ENST00000621176 KIF16BQ96L93 1317 aa11.02□□□□□ -0.64
TRIM6-212ENST00000621176 SIGLEC1Q9BZZ2 1709 aa11.02□□□□□ -0.64
TRIM6-212ENST00000621176 CHD1LQ86WJ1 897 aa11.02□□□□□ -0.65
TRIM6-212ENST00000621176 NCOA3Q9Y6Q9 1424 aa11.02□□□□□ -0.65
TRIM6-212ENST00000621176 ABCC3O15438 1527 aa11.02□□□□□ -0.65
TRIM6-212ENST00000621176 NEXMIFQ5QGS0 1516 aa11.02□□□□□ -0.65
TRIM6-212ENST00000621176 IPO8O15397 1037 aaKnown RBP11.02□□□□□ -0.65
TRIM6-212ENST00000621176 HECW2Q9P2P5 1572 aa11.01□□□□□ -0.65
TRIM6-212ENST00000621176 DIAPH1O60610 1272 aaKnown RBP11.01□□□□□ -0.65
TRIM6-212ENST00000621176 MINK1Q8N4C8 1332 aaPredicted RBP11.01□□□□□ -0.65
TRIM6-212ENST00000621176 FBLN1P23142 703 aa11.01□□□□□ -0.65
TRIM6-212ENST00000621176 IDI1Q13907 227 aa11.01□□□□□ -0.65
TRIM6-212ENST00000621176 KIF2CQ99661 725 aa11.01□□□□□ -0.65
TRIM6-212ENST00000621176 SNX21Q969T3 373 aa11.01□□□□□ -0.65
TRIM6-212ENST00000621176 POGZQ7Z3K3 1410 aa11□□□□□ -0.65
TRIM6-212ENST00000621176 CD163L1Q9NR16 1453 aa11□□□□□ -0.65
TRIM6-212ENST00000621176 ALDH1L2Q3SY69 923 aa11□□□□□ -0.65
TRIM6-212ENST00000621176 TNPO1Q92973 898 aaKnown RBP11□□□□□ -0.65
TRIM6-212ENST00000621176 MLH3Q9UHC1 1453 aa11□□□□□ -0.65
TRIM6-212ENST00000621176 DDX11L8A8MPP1 907 aa11□□□□□ -0.65
TRIM6-212ENST00000621176 CD2BP2O95400 341 aaKnown RBP11□□□□□ -0.65
TRIM6-212ENST00000621176 MRE11P49959 708 aa11□□□□□ -0.65
TRIM6-212ENST00000621176 TERF2IPQ9NYB0 399 aa11□□□□□ -0.65
TRIM6-212ENST00000621176 PNPLA6Q8IY17 1366 aa10.99□□□□□ -0.65
TRIM6-212ENST00000621176 PRAM1Q96QH2 718 aa10.99□□□□□ -0.65
TRIM6-212ENST00000621176 C1orf115Q9H7X2 142 aa10.99□□□□□ -0.65
TRIM6-212ENST00000621176 ZBTB7BO15156 539 aaPredicted RBP10.99□□□□□ -0.65
TRIM6-212ENST00000621176 BMP2KLQ5H9B9 411 aa10.99□□□□□ -0.65
TRIM6-212ENST00000621176 ANKRD45Q5TZF3 282 aa10.99□□□□□ -0.65
TRIM6-212ENST00000621176 GRPEL1Q9HAV7 217 aa10.99□□□□□ -0.65
TRIM6-212ENST00000621176 PIK3C2BO00750 1634 aa10.99□□□□□ -0.65
TRIM6-212ENST00000621176 PPIP5K1Q6PFW1 1433 aa10.99□□□□□ -0.65
TRIM6-212ENST00000621176 THUMPD2Q9BTF0 503 aaKnown RBP10.98□□□□□ -0.65
TRIM6-212ENST00000621176 PRKAR2BP31323 418 aa10.98□□□□□ -0.65
TRIM6-212ENST00000621176 FCHSD2O94868 740 aa10.98□□□□□ -0.65
TRIM6-212ENST00000621176 CLCN1P35523 988 aa10.98□□□□□ -0.65
TRIM6-212ENST00000621176 GAS2L3Q86XJ1 694 aa10.98□□□□□ -0.65
TRIM6-212ENST00000621176 TSPYL6Q8N831 410 aa10.98□□□□□ -0.65
TRIM6-212ENST00000621176 UBE2Q2Q8WVN8 375 aa10.98□□□□□ -0.65
TRIM6-212ENST00000621176 RBM42Q9BTD8 480 aaKnown RBP10.98□□□□□ -0.65
TRIM6-212ENST00000621176 FOXD4L1Q9NU39 408 aa10.98□□□□□ -0.65
TRIM6-212ENST00000621176 ATAD2Q6PL18 1390 aa10.97□□□□□ -0.65
TRIM6-212ENST00000621176 PTPRMP28827 1452 aa10.97□□□□□ -0.65
TRIM6-212ENST00000621176 RAPGEF3O95398 923 aa10.97□□□□□ -0.65
TRIM6-212ENST00000621176 HSP90AB1P08238 724 aaKnown RBP10.97□□□□□ -0.65
TRIM6-212ENST00000621176 SIRT2Q8IXJ6 389 aa10.97□□□□□ -0.65
TRIM6-212ENST00000621176 PHACTR3Q96KR7 559 aa10.97□□□□□ -0.65
TRIM6-212ENST00000621176 VAMP4O75379 141 aa10.97□□□□□ -0.65
TRIM6-212ENST00000621176 CABP1Q9NZU7 370 aa10.97□□□□□ -0.65
TRIM6-212ENST00000621176 MED14O60244 1454 aa10.97□□□□□ -0.65
TRIM6-212ENST00000621176 ELL2O00472 640 aaPredicted RBP10.96□□□□□ -0.65
TRIM6-212ENST00000621176 BRPF1P55201 1214 aaPredicted RBP10.96□□□□□ -0.65
TRIM6-212ENST00000621176 RAB3GAP1Q15042 981 aa10.96□□□□□ -0.65
TRIM6-212ENST00000621176 TBC1D9Q6ZT07 1266 aa10.96□□□□□ -0.65
TRIM6-212ENST00000621176 LRRC7Q96NW7 1537 aa10.96□□□□□ -0.65
TRIM6-212ENST00000621176 HMOX1P09601 288 aa10.96□□□□□ -0.66
TRIM6-212ENST00000621176 PNNQ9H307 717 aaKnown RBP10.96□□□□□ -0.66
TRIM6-212ENST00000621176 MRPL50Q8N5N7 158 aaKnown RBP10.95□□□□□ -0.66
TRIM6-212ENST00000621176 POLKQ9UBT6 870 aa10.95□□□□□ -0.66
TRIM6-212ENST00000621176 ANKRD26Q9UPS8 1709 aa10.95□□□□□ -0.66
TRIM6-212ENST00000621176 HDGFL2Q7Z4V5 671 aaPredicted RBP10.95□□□□□ -0.66
TRIM6-212ENST00000621176 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.95□□□□□ -0.66
TRIM6-212ENST00000621176 GCC1Q96CN9 775 aa10.95□□□□□ -0.66
TRIM6-212ENST00000621176 CDK19Q9BWU1 502 aa10.95□□□□□ -0.66
TRIM6-212ENST00000621176 CIZ1Q9ULV3 898 aaPredicted RBP10.95□□□□□ -0.66
TRIM6-212ENST00000621176 ZFYVE9O95405 1425 aa10.95□□□□□ -0.66
TRIM6-212ENST00000621176 FAM135BQ49AJ0 1406 aa10.95□□□□□ -0.66
TRIM6-212ENST00000621176 ERBB4Q15303 1308 aa10.95□□□□□ -0.66
TRIM6-212ENST00000621176 CFAP74Q9C0B2 1584 aa10.95□□□□□ -0.66
TRIM6-212ENST00000621176 ZNF428Q96B54 188 aa10.94□□□□□ -0.66
TRIM6-212ENST00000621176 HSP90AA1P07900 732 aaKnown RBP10.94□□□□□ -0.66
TRIM6-212ENST00000621176 GBP4Q96PP9 640 aa10.94□□□□□ -0.66
TRIM6-212ENST00000621176 YTHDC2Q9H6S0 1430 aaKnown RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms