RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 ANKLE2Q86XL3 938 aa25.02■■□□□ 1.6
PSPC1-206ENST00000619300 WWC1Q8IX03 1113 aa25.02■■□□□ 1.6
PSPC1-206ENST00000619300 COL3A1P02461 1466 aaPredicted RBP25.01■■□□□ 1.59
PSPC1-206ENST00000619300 PLEKHG3A1L390 1219 aa25.01■■□□□ 1.59
PSPC1-206ENST00000619300 NME9Q86XW9 330 aa25.01■■□□□ 1.59
PSPC1-206ENST00000619300 SPINK5Q9NQ38 1064 aaPredicted RBP25■■□□□ 1.59
PSPC1-206ENST00000619300 PIK3R4Q99570 1358 aa25■■□□□ 1.59
PSPC1-206ENST00000619300 NCBP3Q53F19 620 aaKnown RBP24.99■■□□□ 1.59
PSPC1-206ENST00000619300 POLKQ9UBT6 870 aa24.99■■□□□ 1.59
PSPC1-206ENST00000619300 DIAPH1O60610 1272 aaKnown RBP24.98■■□□□ 1.59
PSPC1-206ENST00000619300 IQSEC2Q5JU85 1478 aa24.98■■□□□ 1.59
PSPC1-206ENST00000619300 U2SURPO15042 1029 aaKnown RBP24.98■■□□□ 1.59
PSPC1-206ENST00000619300 MYT1Q01538 1121 aa24.98■■□□□ 1.59
PSPC1-206ENST00000619300 PHF23Q9BUL5 403 aaPredicted RBP24.98■■□□□ 1.59
PSPC1-206ENST00000619300 NUTM2FA1L443 756 aa24.97■■□□□ 1.59
PSPC1-206ENST00000619300 NEUROD2Q15784 382 aa24.96■■□□□ 1.59
PSPC1-206ENST00000619300 CCDC27Q2M243 656 aa24.96■■□□□ 1.59
PSPC1-206ENST00000619300 COG3Q96JB2 828 aa24.96■■□□□ 1.59
PSPC1-206ENST00000619300 RRP7AQ9Y3A4 280 aaKnown RBP24.96■■□□□ 1.59
PSPC1-206ENST00000619300 DMRT2Q9Y5R5 561 aa24.96■■□□□ 1.59
PSPC1-206ENST00000619300 ACEP12821 1306 aa24.96■■□□□ 1.59
PSPC1-206ENST00000619300 TSHZ2Q9NRE2 1034 aa24.96■■□□□ 1.59
PSPC1-206ENST00000619300 ZRANB1Q9UGI0 708 aa24.96■■□□□ 1.59
PSPC1-206ENST00000619300 MON2Q7Z3U7 1717 aa24.96■■□□□ 1.59
PSPC1-206ENST00000619300 KCNA6P17658 529 aa24.95■■□□□ 1.58
PSPC1-206ENST00000619300 FBLN1P23142 703 aa24.95■■□□□ 1.58
PSPC1-206ENST00000619300 AKAP12Q02952 1782 aa24.94■■□□□ 1.58
PSPC1-206ENST00000619300 PLEKHF1Q96S99 279 aa24.94■■□□□ 1.58
PSPC1-206ENST00000619300 AATKQ6ZMQ8 1374 aa24.94■■□□□ 1.58
PSPC1-206ENST00000619300 XRN1Q8IZH2 1706 aaKnown RBP24.94■■□□□ 1.58
PSPC1-206ENST00000619300 WDR63Q8IWG1 891 aa24.93■■□□□ 1.58
PSPC1-206ENST00000619300 ZNF142P52746 1687 aaPredicted RBP24.93■■□□□ 1.58
PSPC1-206ENST00000619300 SETD1BQ9UPS6 1966 aaKnown RBP24.93■■□□□ 1.58
PSPC1-206ENST00000619300 NKTRP30414 1462 aaKnown RBP24.92■■□□□ 1.58
PSPC1-206ENST00000619300 PPM1GO15355 546 aaPredicted RBP24.92■■□□□ 1.58
PSPC1-206ENST00000619300 CCDC136Q96JN2 1154 aa24.92■■□□□ 1.58
PSPC1-206ENST00000619300 TTC21BQ7Z4L5 1316 aa24.92■■□□□ 1.58
PSPC1-206ENST00000619300 TOPAZ1Q8N9V7 1692 aa24.92■■□□□ 1.58
PSPC1-206ENST00000619300 ITSN1Q15811 1721 aa24.92■■□□□ 1.58
PSPC1-206ENST00000619300 PLIN1O60240 522 aa24.91■■□□□ 1.58
PSPC1-206ENST00000619300 EXOC6Q8TAG9 804 aa24.91■■□□□ 1.58
PSPC1-206ENST00000619300 PNNQ9H307 717 aaKnown RBP24.91■■□□□ 1.58
PSPC1-206ENST00000619300 USP6P35125 1406 aa24.88■■□□□ 1.57
PSPC1-206ENST00000619300 EMILIN1Q9Y6C2 1016 aa24.88■■□□□ 1.57
PSPC1-206ENST00000619300 FCHSD2O94868 740 aa24.87■■□□□ 1.57
PSPC1-206ENST00000619300 MAPK8IP3Q9UPT6 1336 aa24.86■■□□□ 1.57
PSPC1-206ENST00000619300 TMPOP42166 694 aaKnown RBP24.85■■□□□ 1.57
PSPC1-206ENST00000619300 PMFBP1Q8TBY8 1022 aa24.85■■□□□ 1.57
PSPC1-206ENST00000619300 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.85■■□□□ 1.57
PSPC1-206ENST00000619300 MAP2P11137 1827 aaKnown RBP24.84■■□□□ 1.57
PSPC1-206ENST00000619300 SSH2Q76I76 1423 aa24.84■■□□□ 1.57
PSPC1-206ENST00000619300 CDK12Q9NYV4 1490 aaPredicted RBP24.83■■□□□ 1.57
PSPC1-206ENST00000619300 ANKARQ7Z5J8 1434 aa24.83■■□□□ 1.56
PSPC1-206ENST00000619300 IL13P35225 146 aa24.83■■□□□ 1.56
PSPC1-206ENST00000619300 RRS1Q15050 365 aaKnown RBP24.83■■□□□ 1.56
PSPC1-206ENST00000619300 NGDNQ8NEJ9 315 aaKnown RBP24.83■■□□□ 1.56
PSPC1-206ENST00000619300 NRKQ7Z2Y5 1582 aa24.82■■□□□ 1.56
PSPC1-206ENST00000619300 TTC21AQ8NDW8 1320 aa24.81■■□□□ 1.56
PSPC1-206ENST00000619300 RSPH6AQ9H0K4 717 aa24.81■■□□□ 1.56
PSPC1-206ENST00000619300 CRBNQ96SW2 442 aa24.8■■□□□ 1.56
PSPC1-206ENST00000619300 C20orf194Q5TEA3 1177 aa24.79■■□□□ 1.56
PSPC1-206ENST00000619300 MYH16Q9H6N6 1097 aa24.79■■□□□ 1.56
PSPC1-206ENST00000619300 TRIM35Q9UPQ4 493 aa24.79■■□□□ 1.56
PSPC1-206ENST00000619300 OVOS2A0A0J9YW53 1432 aa24.79■■□□□ 1.56
PSPC1-206ENST00000619300 OVOS2Q6IE36 1432 aa24.79■■□□□ 1.56
PSPC1-206ENST00000619300 CHD2O14647 1828 aaKnown RBP24.79■■□□□ 1.56
PSPC1-206ENST00000619300 NPHP4O75161 1426 aaPredicted RBP24.79■■□□□ 1.56
PSPC1-206ENST00000619300 RIPK4P57078 832 aa24.78■■□□□ 1.56
PSPC1-206ENST00000619300 BCAR3O75815 825 aa24.77■■□□□ 1.56
PSPC1-206ENST00000619300 PRKAR2BP31323 418 aa24.77■■□□□ 1.56
PSPC1-206ENST00000619300 USP31Q70CQ4 1352 aa24.77■■□□□ 1.56
PSPC1-206ENST00000619300 NEFMP07197 916 aa24.76■■□□□ 1.55
PSPC1-206ENST00000619300 HMOX1P09601 288 aa24.74■■□□□ 1.55
PSPC1-206ENST00000619300 IL16Q14005 1332 aa24.73■■□□□ 1.55
PSPC1-206ENST00000619300 RGPD8O14715 1765 aaPredicted RBP24.73■■□□□ 1.55
PSPC1-206ENST00000619300 LRRC7Q96NW7 1537 aa24.73■■□□□ 1.55
PSPC1-206ENST00000619300 FMN2Q9NZ56 1722 aa24.73■■□□□ 1.55
PSPC1-206ENST00000619300 RBM33Q96EV2 1170 aaKnown RBP24.71■■□□□ 1.55
PSPC1-206ENST00000619300 PHACTR3Q96KR7 559 aa24.71■■□□□ 1.55
PSPC1-206ENST00000619300 RARSP54136 660 aaKnown RBP24.7■■□□□ 1.54
PSPC1-206ENST00000619300 NFE2L2Q16236 605 aa24.69■■□□□ 1.54
PSPC1-206ENST00000619300 EIF4A2Q14240 407 aaKnown RBP24.68■■□□□ 1.54
PSPC1-206ENST00000619300 ADGRL3Q9HAR2 1447 aa24.67■■□□□ 1.54
PSPC1-206ENST00000619300 NALCNQ8IZF0 1738 aa24.67■■□□□ 1.54
PSPC1-206ENST00000619300 FANCIQ9NVI1 1328 aa24.67■■□□□ 1.54
PSPC1-206ENST00000619300 CT47B1P0C2W7 299 aaPredicted RBP24.67■■□□□ 1.54
PSPC1-206ENST00000619300 PHF8Q9UPP1 1060 aa24.67■■□□□ 1.54
PSPC1-206ENST00000619300 PDE3AQ14432 1141 aa24.66■■□□□ 1.54
PSPC1-206ENST00000619300 TSR2Q969E8 191 aaKnown RBP24.66■■□□□ 1.54
PSPC1-206ENST00000619300 SOX12O15370 315 aa24.65■■□□□ 1.54
PSPC1-206ENST00000619300 RBM19Q9Y4C8 960 aaKnown RBP24.65■■□□□ 1.54
PSPC1-206ENST00000619300 NLRP6P59044 892 aa24.64■■□□□ 1.54
PSPC1-206ENST00000619300 HSP90AB2PQ58FF8 381 aa24.64■■□□□ 1.54
PSPC1-206ENST00000619300 MAP3K19Q56UN5 1328 aa24.63■■□□□ 1.53
PSPC1-206ENST00000619300 C14orf37Q86TY3 774 aa24.62■■□□□ 1.53
PSPC1-206ENST00000619300 CANXP27824 592 aaKnown RBP24.62■■□□□ 1.53
PSPC1-206ENST00000619300 EXOSC9Q06265 439 aaKnown RBP24.62■■□□□ 1.53
PSPC1-206ENST00000619300 ABTB2Q8N961 1025 aa24.61■■□□□ 1.53
PSPC1-206ENST00000619300 PIK3C2AO00443 1686 aa24.61■■□□□ 1.53
PSPC1-206ENST00000619300 SBNO1A3KN83 1393 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms