RNA–Protein interactions for RNA: ENST00000619160.4

PCSK6-218, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCSK6, Length 3,093 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-218ENST00000619160 C1orf115Q9H7X2 142 aa28.94■■■□□ 2.22
PCSK6-218ENST00000619160 CHD1LQ86WJ1 897 aa28.94■■■□□ 2.22
PCSK6-218ENST00000619160 NUCB1Q02818 461 aa28.92■■■□□ 2.22
PCSK6-218ENST00000619160 KIF16BQ96L93 1317 aa28.91■■■□□ 2.22
PCSK6-218ENST00000619160 PLEKHF1Q96S99 279 aa28.9■■■□□ 2.22
PCSK6-218ENST00000619160 ANKRD36BQ8N2N9 1353 aa28.9■■■□□ 2.22
PCSK6-218ENST00000619160 RBM25P49756 843 aaKnown RBP28.9■■■□□ 2.22
PCSK6-218ENST00000619160 DEPDC5O75140 1603 aa28.9■■■□□ 2.22
PCSK6-218ENST00000619160 ADGRL1O94910 1474 aa28.9■■■□□ 2.22
PCSK6-218ENST00000619160 CD109Q6YHK3 1445 aa28.9■■■□□ 2.22
PCSK6-218ENST00000619160 GAS2L3Q86XJ1 694 aa28.9■■■□□ 2.22
PCSK6-218ENST00000619160 KIF1BO60333 1816 aa28.88■■■□□ 2.21
PCSK6-218ENST00000619160 RBM42Q9BTD8 480 aaKnown RBP28.88■■■□□ 2.21
PCSK6-218ENST00000619160 ELL2O00472 640 aaPredicted RBP28.87■■■□□ 2.21
PCSK6-218ENST00000619160 CD2BP2O95400 341 aaKnown RBP28.87■■■□□ 2.21
PCSK6-218ENST00000619160 SNX21Q969T3 373 aa28.86■■■□□ 2.21
PCSK6-218ENST00000619160 VWDEQ8N2E2 1590 aa28.86■■■□□ 2.21
PCSK6-218ENST00000619160 MROH2AA6NES4 1674 aa28.84■■■□□ 2.21
PCSK6-218ENST00000619160 CFAP65Q6ZU64 1925 aaKnown RBP28.84■■■□□ 2.21
PCSK6-218ENST00000619160 NRXN1Q9ULB1 1477 aa28.84■■■□□ 2.21
PCSK6-218ENST00000619160 DIAPH1O60610 1272 aaKnown RBP28.84■■■□□ 2.21
PCSK6-218ENST00000619160 NCBP3Q53F19 620 aaKnown RBP28.83■■■□□ 2.21
PCSK6-218ENST00000619160 NSD2O96028 1365 aa28.83■■■□□ 2.21
PCSK6-218ENST00000619160 EFCAB6Q5THR3 1501 aa28.82■■■□□ 2.2
PCSK6-218ENST00000619160 DDIT3P35638 169 aa28.82■■■□□ 2.2
PCSK6-218ENST00000619160 RAB3GAP1Q15042 981 aa28.82■■■□□ 2.2
PCSK6-218ENST00000619160 ABCC11Q96J66 1382 aa28.82■■■□□ 2.2
PCSK6-218ENST00000619160 A0A1W2PP64 1363 aa28.82■■■□□ 2.2
PCSK6-218ENST00000619160 MINK1Q8N4C8 1332 aaPredicted RBP28.81■■■□□ 2.2
PCSK6-218ENST00000619160 PLEKHG5O94827 1062 aa28.81■■■□□ 2.2
PCSK6-218ENST00000619160 BMP2KLQ5H9B9 411 aa28.81■■■□□ 2.2
PCSK6-218ENST00000619160 ARID3AQ99856 593 aa28.81■■■□□ 2.2
PCSK6-218ENST00000619160 THUMPD2Q9BTF0 503 aaKnown RBP28.81■■■□□ 2.2
PCSK6-218ENST00000619160 CIZ1Q9ULV3 898 aaPredicted RBP28.81■■■□□ 2.2
PCSK6-218ENST00000619160 QRICH2Q9H0J4 1663 aa28.81■■■□□ 2.2
PCSK6-218ENST00000619160 MYO3AQ8NEV4 1616 aa28.8■■■□□ 2.2
PCSK6-218ENST00000619160 SSFA2P28290 1259 aa28.8■■■□□ 2.2
PCSK6-218ENST00000619160 TBC1D9Q6ZT07 1266 aa28.8■■■□□ 2.2
PCSK6-218ENST00000619160 ISY1Q9ULR0 285 aaKnown RBP28.8■■■□□ 2.2
PCSK6-218ENST00000619160 RBM10P98175 930 aaKnown RBP28.8■■■□□ 2.2
PCSK6-218ENST00000619160 K7ELQ4 463 aaPredicted RBP28.79■■■□□ 2.2
PCSK6-218ENST00000619160 FBLN1P23142 703 aa28.79■■■□□ 2.2
PCSK6-218ENST00000619160 SKOR2Q2VWA4 1001 aaPredicted RBP28.79■■■□□ 2.2
PCSK6-218ENST00000619160 PODXL2Q9NZ53 605 aa28.79■■■□□ 2.2
PCSK6-218ENST00000619160 GOLGA6L22H0YM25 854 aa28.78■■■□□ 2.2
PCSK6-218ENST00000619160 FYB1O15117 783 aa28.78■■■□□ 2.2
PCSK6-218ENST00000619160 VGFO15240 615 aaPredicted RBP28.78■■■□□ 2.2
PCSK6-218ENST00000619160 KIF2CQ99661 725 aa28.78■■■□□ 2.2
PCSK6-218ENST00000619160 IL16Q14005 1332 aa28.77■■■□□ 2.2
PCSK6-218ENST00000619160 NEURL4Q96JN8 1562 aa28.77■■■□□ 2.2
PCSK6-218ENST00000619160 NCLP19338 710 aaKnown RBP28.77■■■□□ 2.2
PCSK6-218ENST00000619160 DDX49Q9Y6V7 483 aaKnown RBP28.77■■■□□ 2.2
PCSK6-218ENST00000619160 NCOA3Q9Y6Q9 1424 aa28.77■■■□□ 2.2
PCSK6-218ENST00000619160 MROH1Q8NDA8 1641 aa28.77■■■□□ 2.2
PCSK6-218ENST00000619160 PRKAR2BP31323 418 aa28.76■■■□□ 2.2
PCSK6-218ENST00000619160 NPATQ14207 1427 aa28.76■■■□□ 2.19
PCSK6-218ENST00000619160 INO80Q9ULG1 1556 aaPredicted RBP28.76■■■□□ 2.19
PCSK6-218ENST00000619160 GAS2L2Q8NHY3 880 aa28.76■■■□□ 2.19
PCSK6-218ENST00000619160 TERF2IPQ9NYB0 399 aa28.76■■■□□ 2.19
PCSK6-218ENST00000619160 SETBP1Q9Y6X0 1596 aa28.75■■■□□ 2.19
PCSK6-218ENST00000619160 HMOX1P09601 288 aa28.75■■■□□ 2.19
PCSK6-218ENST00000619160 KIAA1211Q6ZU35 1233 aa28.75■■■□□ 2.19
PCSK6-218ENST00000619160 PPRC1Q5VV67 1664 aaKnown RBP28.75■■■□□ 2.19
PCSK6-218ENST00000619160 ALDH1L2Q3SY69 923 aa28.74■■■□□ 2.19
PCSK6-218ENST00000619160 ANP32BQ92688 251 aaKnown RBP28.74■■■□□ 2.19
PCSK6-218ENST00000619160 ADGRB1O14514 1584 aa28.74■■■□□ 2.19
PCSK6-218ENST00000619160 ADGRB3O60242 1522 aa28.74■■■□□ 2.19
PCSK6-218ENST00000619160 UHRF1BP1LA0JNW5 1464 aa28.74■■■□□ 2.19
PCSK6-218ENST00000619160 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.73■■■□□ 2.199e-7■■■□□ 15.2
PCSK6-218ENST00000619160 RPGRIP1LQ68CZ1 1315 aa28.73■■■□□ 2.19
PCSK6-218ENST00000619160 ZBTB7BO15156 539 aaPredicted RBP28.73■■■□□ 2.19
PCSK6-218ENST00000619160 GCC1Q96CN9 775 aa28.73■■■□□ 2.19
PCSK6-218ENST00000619160 ADGRB2O60241 1585 aa28.72■■■□□ 2.19
PCSK6-218ENST00000619160 NASPP49321 788 aaPredicted RBP28.71■■■□□ 2.19
PCSK6-218ENST00000619160 TSPYL6Q8N831 410 aa28.71■■■□□ 2.19
PCSK6-218ENST00000619160 TULP4Q9NRJ4 1543 aa28.71■■■□□ 2.19
PCSK6-218ENST00000619160 IFT172Q9UG01 1749 aa28.69■■■□□ 2.18
PCSK6-218ENST00000619160 PUS7Q96PZ0 661 aaKnown RBP28.69■■■□□ 2.18
PCSK6-218ENST00000619160 PPIP5K1Q6PFW1 1433 aa28.69■■■□□ 2.18
PCSK6-218ENST00000619160 ARAP3Q8WWN8 1544 aa28.69■■■□□ 2.18
PCSK6-218ENST00000619160 PTMSP20962 102 aa28.68■■■□□ 2.18
PCSK6-218ENST00000619160 PRAM1Q96QH2 718 aa28.68■■■□□ 2.18
PCSK6-218ENST00000619160 HDGFL2Q7Z4V5 671 aaPredicted RBP28.67■■■□□ 2.18
PCSK6-218ENST00000619160 CDC45O75419 566 aa28.67■■■□□ 2.18
PCSK6-218ENST00000619160 MCTP1Q6DN14 999 aa28.66■■■□□ 2.18
PCSK6-218ENST00000619160 PDCL3Q9H2J4 239 aa28.66■■■□□ 2.18
PCSK6-218ENST00000619160 CHMP4BQ9H444 224 aaKnown RBP28.66■■■□□ 2.18
PCSK6-218ENST00000619160 APBB1O00213 710 aa28.66■■■□□ 2.18
PCSK6-218ENST00000619160 SIRT2Q8IXJ6 389 aa28.66■■■□□ 2.18
PCSK6-218ENST00000619160 PHACTR3Q96KR7 559 aa28.66■■■□□ 2.18
PCSK6-218ENST00000619160 FCHSD2O94868 740 aa28.65■■■□□ 2.18
PCSK6-218ENST00000619160 BAG4O95429 457 aaKnown RBP28.65■■■□□ 2.18
PCSK6-218ENST00000619160 VAMP4O75379 141 aa28.65■■■□□ 2.18
PCSK6-218ENST00000619160 USP32Q8NFA0 1604 aa28.64■■■□□ 2.18
PCSK6-218ENST00000619160 TPM2P07951 284 aa28.64■■■□□ 2.18
PCSK6-218ENST00000619160 MRPL50Q8N5N7 158 aaKnown RBP28.64■■■□□ 2.18
PCSK6-218ENST00000619160 CABP1Q9NZU7 370 aa28.64■■■□□ 2.18
PCSK6-218ENST00000619160 A0A0U1RQG5 324 aaPredicted RBP28.63■■■□□ 2.17
PCSK6-218ENST00000619160 FAM13BQ9NYF5 915 aa28.63■■■□□ 2.17
PCSK6-218ENST00000619160 CCDC173Q0VFZ6 552 aa28.62■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms