RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 CARD14Q9BXL6 1004 aa9.03□□□□□ -0.96
SRGAP3-213ENST00000618999 CABP1Q9NZU7 370 aa9.03□□□□□ -0.96
SRGAP3-213ENST00000618999 POLR1AO95602 1720 aaPredicted RBP9.03□□□□□ -0.96
SRGAP3-213ENST00000618999 HDGFL2Q7Z4V5 671 aaPredicted RBP9.02□□□□□ -0.96
SRGAP3-213ENST00000618999 ABCC11Q96J66 1382 aa9.02□□□□□ -0.97
SRGAP3-213ENST00000618999 PLEKHH1Q9ULM0 1364 aa9.02□□□□□ -0.97
SRGAP3-213ENST00000618999 SAMD1Q6SPF0 538 aaPredicted RBP9.02□□□□□ -0.97
SRGAP3-213ENST00000618999 TBX22Q9Y458 520 aa9.02□□□□□ -0.97
SRGAP3-213ENST00000618999 PLEKHG1Q9ULL1 1385 aa9.01□□□□□ -0.97
SRGAP3-213ENST00000618999 PLIN1O60240 522 aa9.01□□□□□ -0.97
SRGAP3-213ENST00000618999 CCDC9Q9Y3X0 531 aaKnown RBP9.01□□□□□ -0.97
SRGAP3-213ENST00000618999 CGNL1Q0VF96 1302 aa9.01□□□□□ -0.97
SRGAP3-213ENST00000618999 C3P01024 1663 aa9.01□□□□□ -0.97
SRGAP3-213ENST00000618999 WASLO00401 505 aaPredicted RBP9□□□□□ -0.97
SRGAP3-213ENST00000618999 CANXP27824 592 aaKnown RBP9□□□□□ -0.97
SRGAP3-213ENST00000618999 PUS7Q96PZ0 661 aaKnown RBP9□□□□□ -0.97
SRGAP3-213ENST00000618999 ANO8Q9HCE9 1232 aaPredicted RBP9□□□□□ -0.97
SRGAP3-213ENST00000618999 ATAD2Q6PL18 1390 aa9□□□□□ -0.97
SRGAP3-213ENST00000618999 PPP2R1AP30153 589 aa9□□□□□ -0.97
SRGAP3-213ENST00000618999 GSE1Q14687 1217 aa9□□□□□ -0.97
SRGAP3-213ENST00000618999 CRBNQ96SW2 442 aa9□□□□□ -0.97
SRGAP3-213ENST00000618999 NSD3Q9BZ95 1437 aa9□□□□□ -0.97
SRGAP3-213ENST00000618999 RIMS1Q86UR5 1692 aaKnown RBP9□□□□□ -0.97
SRGAP3-213ENST00000618999 PARD3Q8TEW0 1356 aa9□□□□□ -0.97
SRGAP3-213ENST00000618999 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.99□□□□□ -0.97
SRGAP3-213ENST00000618999 ASXL1Q8IXJ9 1541 aa8.99□□□□□ -0.97
SRGAP3-213ENST00000618999 RGS3P49796 1198 aa8.99□□□□□ -0.97
SRGAP3-213ENST00000618999 PTPRMP28827 1452 aa8.99□□□□□ -0.97
SRGAP3-213ENST00000618999 NUDT16Q96DE0 195 aaKnown RBP8.99□□□□□ -0.97
SRGAP3-213ENST00000618999 WDR70Q9NW82 654 aa8.99□□□□□ -0.97
SRGAP3-213ENST00000618999 KDM5AP29375 1690 aaKnown RBP8.99□□□□□ -0.97
SRGAP3-213ENST00000618999 PDIA4P13667 645 aaKnown RBP8.99□□□□□ -0.97
SRGAP3-213ENST00000618999 GGNBP2Q9H3C7 697 aa8.99□□□□□ -0.97
SRGAP3-213ENST00000618999 RBM33Q96EV2 1170 aaKnown RBP8.98□□□□□ -0.97
SRGAP3-213ENST00000618999 MKRN4PQ13434 485 aaPredicted RBP8.98□□□□□ -0.97
SRGAP3-213ENST00000618999 CDCA7LQ96GN5 454 aa8.98□□□□□ -0.97
SRGAP3-213ENST00000618999 GPBP1L1Q9HC44 474 aaPredicted RBP8.98□□□□□ -0.97
SRGAP3-213ENST00000618999 CCDC61Q9Y6R9 512 aa8.98□□□□□ -0.97
SRGAP3-213ENST00000618999 ADAMTS13Q76LX8 1427 aa8.98□□□□□ -0.97
SRGAP3-213ENST00000618999 KCNA6P17658 529 aa8.98□□□□□ -0.97
SRGAP3-213ENST00000618999 SIRT1Q96EB6 747 aa8.98□□□□□ -0.97
SRGAP3-213ENST00000618999 QRICH2Q9H0J4 1663 aa8.97□□□□□ -0.97
SRGAP3-213ENST00000618999 ROBO2Q9HCK4 1378 aa8.97□□□□□ -0.97
SRGAP3-213ENST00000618999 UBR1Q8IWV7 1749 aa8.97□□□□□ -0.97
SRGAP3-213ENST00000618999 CENPQQ7L2Z9 268 aaPredicted RBP8.97□□□□□ -0.97
SRGAP3-213ENST00000618999 NCKAP5LQ9HCH0 1330 aa8.97□□□□□ -0.97
SRGAP3-213ENST00000618999 SLC4A3P48751 1232 aa8.97□□□□□ -0.97
SRGAP3-213ENST00000618999 UPF2Q9HAU5 1272 aaKnown RBP8.97□□□□□ -0.97
SRGAP3-213ENST00000618999 ANKRD36BQ8N2N9 1353 aa8.96□□□□□ -0.97
SRGAP3-213ENST00000618999 NFKBIBQ15653 356 aa8.96□□□□□ -0.97
SRGAP3-213ENST00000618999 FAM161AQ3B820 660 aa8.96□□□□□ -0.97
SRGAP3-213ENST00000618999 BECN1Q14457 450 aa8.96□□□□□ -0.98
SRGAP3-213ENST00000618999 TULP4Q9NRJ4 1543 aa8.96□□□□□ -0.98
SRGAP3-213ENST00000618999 HSPA2P54652 639 aa8.96□□□□□ -0.98
SRGAP3-213ENST00000618999 CFAP53Q96M91 514 aa8.95□□□□□ -0.98
SRGAP3-213ENST00000618999 A0A1W2PP64 1363 aa8.95□□□□□ -0.98
SRGAP3-213ENST00000618999 ARHGEF28Q8N1W1 1705 aaKnown RBP8.95□□□□□ -0.98
SRGAP3-213ENST00000618999 NGDNQ8NEJ9 315 aaKnown RBP8.95□□□□□ -0.98
SRGAP3-213ENST00000618999 PMFBP1Q8TBY8 1022 aa8.95□□□□□ -0.98
SRGAP3-213ENST00000618999 NINLQ9Y2I6 1382 aa8.95□□□□□ -0.98
SRGAP3-213ENST00000618999 CEP170BQ9Y4F5 1589 aaPredicted RBP8.95□□□□□ -0.98
SRGAP3-213ENST00000618999 ARHGAP23Q9P227 1491 aa8.94□□□□□ -0.98
SRGAP3-213ENST00000618999 MTHFSP49914 203 aa8.94□□□□□ -0.98
SRGAP3-213ENST00000618999 ADAMTS8Q9UP79 889 aa8.94□□□□□ -0.98
SRGAP3-213ENST00000618999 SETD1BQ9UPS6 1966 aaKnown RBP8.94□□□□□ -0.98
SRGAP3-213ENST00000618999 MYO3AQ8NEV4 1616 aa8.94□□□□□ -0.98
SRGAP3-213ENST00000618999 FAM135BQ49AJ0 1406 aa8.94□□□□□ -0.98
SRGAP3-213ENST00000618999 NPC1L1Q9UHC9 1359 aa8.94□□□□□ -0.98
SRGAP3-213ENST00000618999 SLIT1O75093 1534 aa8.94□□□□□ -0.98
SRGAP3-213ENST00000618999 HOXD11P31277 338 aaPredicted RBP8.94□□□□□ -0.98
SRGAP3-213ENST00000618999 RSPH6AQ9H0K4 717 aa8.94□□□□□ -0.98
SRGAP3-213ENST00000618999 GOLGA2Q08379 1002 aa8.93□□□□□ -0.98
SRGAP3-213ENST00000618999 FYB1O15117 783 aa8.93□□□□□ -0.98
SRGAP3-213ENST00000618999 BRPF3Q9ULD4 1205 aa8.93□□□□□ -0.98
SRGAP3-213ENST00000618999 PTPRUQ92729 1446 aa8.93□□□□□ -0.98
SRGAP3-213ENST00000618999 PPIP5K1Q6PFW1 1433 aa8.93□□□□□ -0.98
SRGAP3-213ENST00000618999 DLC1Q96QB1 1528 aa8.92□□□□□ -0.98
SRGAP3-213ENST00000618999 ADAMTSL3P82987 1691 aa8.92□□□□□ -0.98
SRGAP3-213ENST00000618999 SOX12O15370 315 aa8.92□□□□□ -0.98
SRGAP3-213ENST00000618999 PROSER2Q86WR7 435 aaPredicted RBP8.92□□□□□ -0.98
SRGAP3-213ENST00000618999 CCDC146Q8IYE0 955 aa8.92□□□□□ -0.98
SRGAP3-213ENST00000618999 RAD21O60216 631 aa8.92□□□□□ -0.98
SRGAP3-213ENST00000618999 ZNF692Q9BU19 519 aaPredicted RBP8.92□□□□□ -0.98
SRGAP3-213ENST00000618999 NRXN3Q9Y4C0 1643 aa8.92□□□□□ -0.98
SRGAP3-213ENST00000618999 FRAT1Q92837 279 aaPredicted RBP8.91□□□□□ -0.98
SRGAP3-213ENST00000618999 PRR36Q9H6K5 1346 aa8.91□□□□□ -0.98
SRGAP3-213ENST00000618999 TECPR2O15040 1411 aa8.91□□□□□ -0.98
SRGAP3-213ENST00000618999 U2SURPO15042 1029 aaKnown RBP8.91□□□□□ -0.98
SRGAP3-213ENST00000618999 RBM25P49756 843 aaKnown RBP8.91□□□□□ -0.98
SRGAP3-213ENST00000618999 NME9Q86XW9 330 aa8.91□□□□□ -0.98
SRGAP3-213ENST00000618999 SKAP1Q86WV1 359 aa8.91□□□□□ -0.98
SRGAP3-213ENST00000618999 COG3Q96JB2 828 aa8.91□□□□□ -0.98
SRGAP3-213ENST00000618999 ACEP12821 1306 aa8.91□□□□□ -0.98
SRGAP3-213ENST00000618999 NPHP4O75161 1426 aaPredicted RBP8.91□□□□□ -0.98
SRGAP3-213ENST00000618999 KCTD17Q8N5Z5 321 aa8.9□□□□□ -0.98
SRGAP3-213ENST00000618999 PLEKHG5O94827 1062 aa8.9□□□□□ -0.98
SRGAP3-213ENST00000618999 U2AF1L5P0DN76 240 aaPredicted RBP8.9□□□□□ -0.98
SRGAP3-213ENST00000618999 FBLN1P23142 703 aa8.9□□□□□ -0.98
SRGAP3-213ENST00000618999 U2AF1Q01081 240 aaKnown RBP eCLIP8.9□□□□□ -0.98
SRGAP3-213ENST00000618999 U3KPZ7 1027 aaPredicted RBP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms