RNA–Protein interactions for RNA: ENST00000618511.4

RDM1-222, Transcript of RAD52 motif containing 1, humanhuman

TSL 1 (best)

Gene RDM1, Length 518 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDM1-222ENST00000618511 ATP7BP35670 1465 aa8.52□□□□□ -1.05
RDM1-222ENST00000618511 POLR3AO14802 1390 aaPredicted RBP8.52□□□□□ -1.05
RDM1-222ENST00000618511 SBNO2Q9Y2G9 1366 aa8.52□□□□□ -1.05
RDM1-222ENST00000618511 WASLO00401 505 aaPredicted RBP8.52□□□□□ -1.05
RDM1-222ENST00000618511 FOXO3O43524 673 aa8.52□□□□□ -1.05
RDM1-222ENST00000618511 PAK3O75914 559 aaPredicted RBP8.51□□□□□ -1.05
RDM1-222ENST00000618511 PSME1Q06323 249 aa8.51□□□□□ -1.05
RDM1-222ENST00000618511 DDX17Q92841 729 aaKnown RBP8.51□□□□□ -1.05
RDM1-222ENST00000618511 POGKQ9P215 609 aa8.51□□□□□ -1.05
RDM1-222ENST00000618511 AFF2P51816 1311 aa8.51□□□□□ -1.05
RDM1-222ENST00000618511 PRR36Q9H6K5 1346 aa8.51□□□□□ -1.05
RDM1-222ENST00000618511 SLIT2O94813 1529 aa8.5□□□□□ -1.05
RDM1-222ENST00000618511 PLEKHG3A1L390 1219 aa8.5□□□□□ -1.05
RDM1-222ENST00000618511 ATRNO75882 1429 aa8.5□□□□□ -1.05
RDM1-222ENST00000618511 TRAK1Q9UPV9 953 aa8.5□□□□□ -1.05
RDM1-222ENST00000618511 BCL9LQ86UU0 1499 aa8.5□□□□□ -1.05
RDM1-222ENST00000618511 RBM6P78332 1123 aaKnown RBP8.49□□□□□ -1.05
RDM1-222ENST00000618511 MEX3CQ5U5Q3 659 aaKnown RBP8.49□□□□□ -1.05
RDM1-222ENST00000618511 KRT28Q7Z3Y7 464 aa8.49□□□□□ -1.05
RDM1-222ENST00000618511 L3MBTL2Q969R5 705 aa8.49□□□□□ -1.05
RDM1-222ENST00000618511 USP32Q8NFA0 1604 aa8.49□□□□□ -1.05
RDM1-222ENST00000618511 RXRBP28702 533 aa8.48□□□□□ -1.05
RDM1-222ENST00000618511 TRIM26Q12899 539 aaPredicted RBP8.48□□□□□ -1.05
RDM1-222ENST00000618511 DCBLD2Q96PD2 775 aa8.48□□□□□ -1.05
RDM1-222ENST00000618511 PHF12Q96QT6 1004 aa8.48□□□□□ -1.05
RDM1-222ENST00000618511 TRPC5Q9UL62 973 aaPredicted RBP8.48□□□□□ -1.05
RDM1-222ENST00000618511 KDM2AQ9Y2K7 1162 aa8.48□□□□□ -1.05
RDM1-222ENST00000618511 CCDC61Q9Y6R9 512 aa8.48□□□□□ -1.05
RDM1-222ENST00000618511 CLSPNQ9HAW4 1339 aa8.48□□□□□ -1.05
RDM1-222ENST00000618511 CENPJQ9HC77 1338 aaPredicted RBP8.48□□□□□ -1.05
RDM1-222ENST00000618511 ARHGEF28Q8N1W1 1705 aaKnown RBP8.47□□□□□ -1.05
RDM1-222ENST00000618511 GALR2O43603 387 aaPredicted RBP8.47□□□□□ -1.05
RDM1-222ENST00000618511 NBPF1Q3BBV0 1214 aa8.47□□□□□ -1.05
RDM1-222ENST00000618511 LHX8Q68G74 356 aa8.47□□□□□ -1.05
RDM1-222ENST00000618511 NGLY1Q96IV0 654 aa8.47□□□□□ -1.05
RDM1-222ENST00000618511 RGS12O14924 1447 aa8.46□□□□□ -1.05
RDM1-222ENST00000618511 RALGAPBQ86X10 1494 aa8.46□□□□□ -1.05
RDM1-222ENST00000618511 C8orf37Q96NL8 207 aa8.46□□□□□ -1.06
RDM1-222ENST00000618511 PUS7Q96PZ0 661 aaKnown RBP8.46□□□□□ -1.06
RDM1-222ENST00000618511 MINK1Q8N4C8 1332 aaPredicted RBP8.46□□□□□ -1.06
RDM1-222ENST00000618511 SSH2Q76I76 1423 aa8.46□□□□□ -1.06
RDM1-222ENST00000618511 NUTM2BA6NNL0 878 aaPredicted RBP8.45□□□□□ -1.06
RDM1-222ENST00000618511 NUTM2EB1AL46 878 aaPredicted RBP8.45□□□□□ -1.06
RDM1-222ENST00000618511 ONECUT3O60422 494 aaPredicted RBP8.45□□□□□ -1.06
RDM1-222ENST00000618511 NUTM2AQ8IVF1 878 aaPredicted RBP8.45□□□□□ -1.06
RDM1-222ENST00000618511 MIER1Q8N108 512 aa8.45□□□□□ -1.06
RDM1-222ENST00000618511 NUDT16Q96DE0 195 aaKnown RBP8.45□□□□□ -1.06
RDM1-222ENST00000618511 USP21Q9UK80 565 aa8.45□□□□□ -1.06
RDM1-222ENST00000618511 TIMELESSQ9UNS1 1208 aa8.45□□□□□ -1.06
RDM1-222ENST00000618511 USP19O94966 1318 aa8.45□□□□□ -1.06
RDM1-222ENST00000618511 TOPAZ1Q8N9V7 1692 aa8.44□□□□□ -1.06
RDM1-222ENST00000618511 TRPM3Q9HCF6 1732 aaPredicted RBP8.44□□□□□ -1.06
RDM1-222ENST00000618511 SAFB2Q14151 953 aaKnown RBP eCLIP8.44□□□□□ -1.06
RDM1-222ENST00000618511 FKBP8Q14318 412 aa8.44□□□□□ -1.06
RDM1-222ENST00000618511 UNC5CLQ8IV45 518 aa8.44□□□□□ -1.06
RDM1-222ENST00000618511 CDK19Q9BWU1 502 aa8.44□□□□□ -1.06
RDM1-222ENST00000618511 QTRT2Q9H974 415 aaKnown RBP8.44□□□□□ -1.06
RDM1-222ENST00000618511 ROCK2O75116 1388 aaKnown RBP8.44□□□□□ -1.06
RDM1-222ENST00000618511 CPDO75976 1380 aa8.44□□□□□ -1.06
RDM1-222ENST00000618511 TRPM1Q7Z4N2 1603 aa8.43□□□□□ -1.06
RDM1-222ENST00000618511 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.43□□□□□ -1.06
RDM1-222ENST00000618511 NUTM2FA1L443 756 aa8.43□□□□□ -1.06
RDM1-222ENST00000618511 SLC24A1O60721 1099 aa8.43□□□□□ -1.06
RDM1-222ENST00000618511 ADAMTS2O95450 1211 aa8.43□□□□□ -1.06
RDM1-222ENST00000618511 XPCQ01831 940 aaPredicted RBP8.43□□□□□ -1.06
RDM1-222ENST00000618511 VPS72Q15906 364 aa8.43□□□□□ -1.06
RDM1-222ENST00000618511 HIRIP3Q9BW71 556 aaPredicted RBP8.43□□□□□ -1.06
RDM1-222ENST00000618511 ATAD2Q6PL18 1390 aa8.43□□□□□ -1.06
RDM1-222ENST00000618511 ALS2Q96Q42 1657 aa8.43□□□□□ -1.06
RDM1-222ENST00000618511 NBPF8Q3BBV2 869 aa8.42□□□□□ -1.06
RDM1-222ENST00000618511 UPF1Q92900 1129 aaKnown RBP eCLIP8.42□□□□□ -1.06
RDM1-222ENST00000618511 GJD4Q96KN9 370 aaPredicted RBP8.42□□□□□ -1.06
RDM1-222ENST00000618511 SIN3AQ96ST3 1273 aa8.42□□□□□ -1.06
RDM1-222ENST00000618511 TSPYL2Q9H2G4 693 aaPredicted RBP8.42□□□□□ -1.06
RDM1-222ENST00000618511 EVC2Q86UK5 1308 aa8.42□□□□□ -1.06
RDM1-222ENST00000618511 USP6P35125 1406 aa8.42□□□□□ -1.06
RDM1-222ENST00000618511 CPSF1Q10570 1443 aaKnown RBP8.42□□□□□ -1.06
RDM1-222ENST00000618511 ACEP12821 1306 aa8.41□□□□□ -1.06
RDM1-222ENST00000618511 PLEKHG5O94827 1062 aa8.41□□□□□ -1.06
RDM1-222ENST00000618511 CCDC125Q86Z20 511 aa8.41□□□□□ -1.06
RDM1-222ENST00000618511 NGDNQ8NEJ9 315 aaKnown RBP8.41□□□□□ -1.06
RDM1-222ENST00000618511 PMFBP1Q8TBY8 1022 aa8.41□□□□□ -1.06
RDM1-222ENST00000618511 PPIP5K1Q6PFW1 1433 aa8.4□□□□□ -1.06
RDM1-222ENST00000618511 TONSLQ96HA7 1378 aa8.4□□□□□ -1.06
RDM1-222ENST00000618511 NINLQ9Y2I6 1382 aa8.4□□□□□ -1.06
RDM1-222ENST00000618511 ITSN1Q15811 1721 aa8.4□□□□□ -1.07
RDM1-222ENST00000618511 FAM83GA6ND36 823 aa8.39□□□□□ -1.07
RDM1-222ENST00000618511 NWD2Q9ULI1 1742 aa8.39□□□□□ -1.07
RDM1-222ENST00000618511 GLI3P10071 1580 aa8.39□□□□□ -1.07
RDM1-222ENST00000618511 SLIT3O75094 1523 aa8.39□□□□□ -1.07
RDM1-222ENST00000618511 ABCC6O95255 1503 aa8.39□□□□□ -1.07
RDM1-222ENST00000618511 ABCA3Q99758 1704 aa8.38□□□□□ -1.07
RDM1-222ENST00000618511 CRYBG1Q9Y4K1 1723 aa8.38□□□□□ -1.07
RDM1-222ENST00000618511 TTC21AQ8NDW8 1320 aa8.38□□□□□ -1.07
RDM1-222ENST00000618511 PLCD3Q8N3E9 789 aa8.38□□□□□ -1.07
RDM1-222ENST00000618511 AATKQ6ZMQ8 1374 aa8.37□□□□□ -1.07
RDM1-222ENST00000618511 USP31Q70CQ4 1352 aa8.37□□□□□ -1.07
RDM1-222ENST00000618511 SPATA31A5Q5VU36 1347 aa8.37□□□□□ -1.07
RDM1-222ENST00000618511 SPATA31A7Q8IWB4 1347 aa8.37□□□□□ -1.07
RDM1-222ENST00000618511 SRPK2P78362 688 aaKnown RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms