RNA–Protein interactions for RNA: ENST00000617697.4

SLC39A1-210, Transcript of solute carrier family 39 member 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLC39A1, Length 2,214 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A1-210ENST00000617697 RIMBP3CA6NJZ7 1639 aa22.93■■□□□ 1.26
SLC39A1-210ENST00000617697 RIMBP3BA6NNM3 1639 aa22.93■■□□□ 1.26
SLC39A1-210ENST00000617697 RIMBP3Q9UFD9 1639 aa22.93■■□□□ 1.26
SLC39A1-210ENST00000617697 ZMYM3Q14202 1370 aa22.93■■□□□ 1.26
SLC39A1-210ENST00000617697 IL16Q14005 1332 aa22.93■■□□□ 1.26
SLC39A1-210ENST00000617697 CDK19Q9BWU1 502 aa22.93■■□□□ 1.26
SLC39A1-210ENST00000617697 A2ML1A8K2U0 1454 aa22.92■■□□□ 1.26
SLC39A1-210ENST00000617697 TSPOAP1O95153 1857 aa22.92■■□□□ 1.26
SLC39A1-210ENST00000617697 IGHDP01880 384 aa22.92■■□□□ 1.26
SLC39A1-210ENST00000617697 PLEKHF1Q96S99 279 aa22.9■■□□□ 1.26
SLC39A1-210ENST00000617697 RIMS2Q9UQ26 1411 aa22.9■■□□□ 1.26
SLC39A1-210ENST00000617697 CDC42BPGQ6DT37 1551 aa22.9■■□□□ 1.26
SLC39A1-210ENST00000617697 DIAPH1O60610 1272 aaKnown RBP22.9■■□□□ 1.26
SLC39A1-210ENST00000617697 SETD1AO15047 1707 aaKnown RBP22.89■■□□□ 1.26
SLC39A1-210ENST00000617697 TMPOP42166 694 aaKnown RBP22.89■■□□□ 1.26
SLC39A1-210ENST00000617697 ZKSCAN2Q63HK3 967 aa22.89■■□□□ 1.26
SLC39A1-210ENST00000617697 PNPLA6Q8IY17 1366 aa22.89■■□□□ 1.25
SLC39A1-210ENST00000617697 RWDD1Q9H446 243 aaPredicted RBP22.88■■□□□ 1.25
SLC39A1-210ENST00000617697 SENP3Q9H4L4 574 aaPredicted RBP22.87■■□□□ 1.25
SLC39A1-210ENST00000617697 LAS1LQ9Y4W2 734 aaKnown RBP22.87■■□□□ 1.25
SLC39A1-210ENST00000617697 NEFMP07197 916 aa22.86■■□□□ 1.25
SLC39A1-210ENST00000617697 FTSJ3Q8IY81 847 aaKnown RBP22.86■■□□□ 1.25
SLC39A1-210ENST00000617697 MVPQ14764 893 aaKnown RBP22.85■■□□□ 1.25
SLC39A1-210ENST00000617697 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.85■■□□□ 1.25
SLC39A1-210ENST00000617697 CABP1Q9NZU7 370 aa22.85■■□□□ 1.25
SLC39A1-210ENST00000617697 BCL2L13Q9BXK5 485 aa22.85■■□□□ 1.25
SLC39A1-210ENST00000617697 BCL11AQ9H165 835 aa22.85■■□□□ 1.25
SLC39A1-210ENST00000617697 DZIP1LQ8IYY4 767 aaKnown RBP22.84■■□□□ 1.25
SLC39A1-210ENST00000617697 SMC4Q9NTJ3 1288 aa22.83■■□□□ 1.25
SLC39A1-210ENST00000617697 RLBP1P12271 317 aa22.82■■□□□ 1.24
SLC39A1-210ENST00000617697 TRIM35Q9UPQ4 493 aa22.82■■□□□ 1.24
SLC39A1-210ENST00000617697 FCHSD2O94868 740 aa22.82■■□□□ 1.24
SLC39A1-210ENST00000617697 KNDC1Q76NI1 1749 aa22.81■■□□□ 1.24
SLC39A1-210ENST00000617697 RIPK4P57078 832 aa22.81■■□□□ 1.24
SLC39A1-210ENST00000617697 EXOSC9Q06265 439 aaKnown RBP22.81■■□□□ 1.24
SLC39A1-210ENST00000617697 TSR2Q969E8 191 aaKnown RBP22.8■■□□□ 1.24
SLC39A1-210ENST00000617697 LRRC7Q96NW7 1537 aa22.8■■□□□ 1.24
SLC39A1-210ENST00000617697 HDGFP51858 240 aaKnown RBP22.8■■□□□ 1.24
SLC39A1-210ENST00000617697 EDC4Q6P2E9 1401 aaKnown RBP22.8■■□□□ 1.24
SLC39A1-210ENST00000617697 KIF16BQ96L93 1317 aa22.79■■□□□ 1.24
SLC39A1-210ENST00000617697 ESF1Q9H501 851 aaKnown RBP22.79■■□□□ 1.24
SLC39A1-210ENST00000617697 PCDHB15Q9Y5E8 787 aa22.79■■□□□ 1.24
SLC39A1-210ENST00000617697 DDX19BQ9UMR2 479 aa22.78■■□□□ 1.24
SLC39A1-210ENST00000617697 NRXN3Q9Y4C0 1643 aa22.78■■□□□ 1.24
SLC39A1-210ENST00000617697 IPO8O15397 1037 aaKnown RBP22.77■■□□□ 1.24
SLC39A1-210ENST00000617697 CALD1Q05682 793 aaKnown RBP22.77■■□□□ 1.24
SLC39A1-210ENST00000617697 UPF2Q9HAU5 1272 aaKnown RBP22.77■■□□□ 1.24
SLC39A1-210ENST00000617697 FAM135BQ49AJ0 1406 aa22.77■■□□□ 1.24
SLC39A1-210ENST00000617697 ZNF428Q96B54 188 aa22.76■■□□□ 1.23
SLC39A1-210ENST00000617697 TNNQ9UQP3 1299 aa22.76■■□□□ 1.23
SLC39A1-210ENST00000617697 PPIP5K1Q6PFW1 1433 aa22.75■■□□□ 1.23
SLC39A1-210ENST00000617697 ATF7IPQ6VMQ6 1270 aa22.75■■□□□ 1.23
SLC39A1-210ENST00000617697 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.75■■□□□ 1.23
SLC39A1-210ENST00000617697 CPSF1Q10570 1443 aaKnown RBP22.75■■□□□ 1.23
SLC39A1-210ENST00000617697 ALDH1L2Q3SY69 923 aa22.74■■□□□ 1.23
SLC39A1-210ENST00000617697 WAPLQ7Z5K2 1190 aa22.74■■□□□ 1.23
SLC39A1-210ENST00000617697 SIRT1Q96EB6 747 aa22.74■■□□□ 1.23
SLC39A1-210ENST00000617697 PDZRN3Q9UPQ7 1066 aa22.74■■□□□ 1.23
SLC39A1-210ENST00000617697 MAP2P11137 1827 aaKnown RBP22.74■■□□□ 1.23
SLC39A1-210ENST00000617697 CDK12Q9NYV4 1490 aaPredicted RBP22.74■■□□□ 1.23
SLC39A1-210ENST00000617697 WASLO00401 505 aaPredicted RBP22.74■■□□□ 1.23
SLC39A1-210ENST00000617697 SSH1Q8WYL5 1049 aa22.73■■□□□ 1.23
SLC39A1-210ENST00000617697 MON2Q7Z3U7 1717 aa22.73■■□□□ 1.23
SLC39A1-210ENST00000617697 BECN1Q14457 450 aa22.73■■□□□ 1.23
SLC39A1-210ENST00000617697 POLKQ9UBT6 870 aa22.73■■□□□ 1.23
SLC39A1-210ENST00000617697 TECPR2O15040 1411 aa22.72■■□□□ 1.23
SLC39A1-210ENST00000617697 CPS1P31327 1500 aa22.72■■□□□ 1.23
SLC39A1-210ENST00000617697 ITSN1Q15811 1721 aa22.72■■□□□ 1.23
SLC39A1-210ENST00000617697 TRIM27P14373 513 aa22.72■■□□□ 1.23
SLC39A1-210ENST00000617697 MLECQ14165 292 aa22.72■■□□□ 1.23
SLC39A1-210ENST00000617697 RSPH6AQ9H0K4 717 aa22.72■■□□□ 1.23
SLC39A1-210ENST00000617697 AATKQ6ZMQ8 1374 aa22.72■■□□□ 1.23
SLC39A1-210ENST00000617697 PRKAR2BP31323 418 aa22.71■■□□□ 1.23
SLC39A1-210ENST00000617697 HDAC1Q13547 482 aaPredicted RBP22.71■■□□□ 1.23
SLC39A1-210ENST00000617697 ITPRIPQ8IWB1 547 aa22.71■■□□□ 1.23
SLC39A1-210ENST00000617697 CHMP4BQ9H444 224 aaKnown RBP22.69■■□□□ 1.22
SLC39A1-210ENST00000617697 AKAP12Q02952 1782 aa22.69■■□□□ 1.22
SLC39A1-210ENST00000617697 SLC4A3P48751 1232 aa22.69■■□□□ 1.22
SLC39A1-210ENST00000617697 NFE2L2Q16236 605 aa22.69■■□□□ 1.22
SLC39A1-210ENST00000617697 NOB1Q9ULX3 412 aaKnown RBP22.68■■□□□ 1.22
SLC39A1-210ENST00000617697 LMOD3Q0VAK6 560 aa22.67■■□□□ 1.22
SLC39A1-210ENST00000617697 METP08581 1390 aa22.67■■□□□ 1.22
SLC39A1-210ENST00000617697 USP19O94966 1318 aa22.67■■□□□ 1.22
SLC39A1-210ENST00000617697 COG3Q96JB2 828 aa22.66■■□□□ 1.22
SLC39A1-210ENST00000617697 BRPF1P55201 1214 aaPredicted RBP22.66■■□□□ 1.22
SLC39A1-210ENST00000617697 NFKBIBQ15653 356 aa22.66■■□□□ 1.22
SLC39A1-210ENST00000617697 TNRQ92752 1358 aa22.66■■□□□ 1.22
SLC39A1-210ENST00000617697 KIF13AQ9H1H9 1805 aa22.66■■□□□ 1.22
SLC39A1-210ENST00000617697 NUDT16Q96DE0 195 aaKnown RBP22.65■■□□□ 1.22
SLC39A1-210ENST00000617697 CCDC61Q9Y6R9 512 aa22.65■■□□□ 1.22
SLC39A1-210ENST00000617697 C3P01024 1663 aa22.65■■□□□ 1.22
SLC39A1-210ENST00000617697 GNAI1P63096 354 aa22.65■■□□□ 1.22
SLC39A1-210ENST00000617697 ZNF692Q9BU19 519 aaPredicted RBP22.64■■□□□ 1.21
SLC39A1-210ENST00000617697 UBR1Q8IWV7 1749 aa22.63■■□□□ 1.21
SLC39A1-210ENST00000617697 IL13P35225 146 aa22.62■■□□□ 1.21
SLC39A1-210ENST00000617697 TXNDC2Q86VQ3 553 aa22.62■■□□□ 1.21
SLC39A1-210ENST00000617697 TMEM57Q8N5G2 664 aa22.62■■□□□ 1.21
SLC39A1-210ENST00000617697 IFT57Q9NWB7 429 aa22.62■■□□□ 1.21
SLC39A1-210ENST00000617697 NME9Q86XW9 330 aa22.62■■□□□ 1.21
SLC39A1-210ENST00000617697 ZBTB40Q9NUA8 1239 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms