RNA–Protein interactions for RNA: ENST00000617039.4

TNFRSF11A-206, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-206ENST00000617039 MVPQ14764 893 aaKnown RBP18.5■□□□□ 0.55
TNFRSF11A-206ENST00000617039 NFKBIBQ15653 356 aa18.5■□□□□ 0.55
TNFRSF11A-206ENST00000617039 SYTL4Q96C24 671 aaPredicted RBP18.5■□□□□ 0.55
TNFRSF11A-206ENST00000617039 KAT6BQ8WYB5 2073 aa18.5■□□□□ 0.55
TNFRSF11A-206ENST00000617039 ACEP12821 1306 aa18.49■□□□□ 0.55
TNFRSF11A-206ENST00000617039 PROSER2Q86WR7 435 aaPredicted RBP18.49■□□□□ 0.55
TNFRSF11A-206ENST00000617039 RPGRIP1LQ68CZ1 1315 aa18.48■□□□□ 0.55
TNFRSF11A-206ENST00000617039 A0A1W2PP64 1363 aa18.48■□□□□ 0.55
TNFRSF11A-206ENST00000617039 ATAD2Q6PL18 1390 aa18.48■□□□□ 0.55
TNFRSF11A-206ENST00000617039 EXOC6BQ9Y2D4 811 aa18.47■□□□□ 0.55
TNFRSF11A-206ENST00000617039 LMOD3Q0VAK6 560 aa18.47■□□□□ 0.55
TNFRSF11A-206ENST00000617039 IL1RAPL2Q9NP60 686 aa18.47■□□□□ 0.55
TNFRSF11A-206ENST00000617039 CHD1O14646 1710 aa18.47■□□□□ 0.55
TNFRSF11A-206ENST00000617039 PIP4K2AP48426 406 aaPredicted RBP18.46■□□□□ 0.55
TNFRSF11A-206ENST00000617039 PDE3AQ14432 1141 aa18.46■□□□□ 0.55
TNFRSF11A-206ENST00000617039 CASC1Q6TDU7 716 aa18.46■□□□□ 0.55
TNFRSF11A-206ENST00000617039 C8orf58Q8NAV2 365 aa18.46■□□□□ 0.55
TNFRSF11A-206ENST00000617039 GCC2Q8IWJ2 1684 aa18.46■□□□□ 0.55
TNFRSF11A-206ENST00000617039 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.46■□□□□ 0.55
TNFRSF11A-206ENST00000617039 NPATQ14207 1427 aa18.46■□□□□ 0.55
TNFRSF11A-206ENST00000617039 DTNBO60941 627 aa18.46■□□□□ 0.55
TNFRSF11A-206ENST00000617039 JARID2Q92833 1246 aaPredicted RBP18.46■□□□□ 0.55
TNFRSF11A-206ENST00000617039 C22orf23Q9BZE7 217 aa18.46■□□□□ 0.55
TNFRSF11A-206ENST00000617039 WDR63Q8IWG1 891 aa18.45■□□□□ 0.54
TNFRSF11A-206ENST00000617039 BCORL1Q5H9F3 1711 aa18.45■□□□□ 0.54
TNFRSF11A-206ENST00000617039 NFE2L2Q16236 605 aa18.44■□□□□ 0.54
TNFRSF11A-206ENST00000617039 DDX17Q92841 729 aaKnown RBP18.44■□□□□ 0.54
TNFRSF11A-206ENST00000617039 STRN4Q9NRL3 753 aa18.44■□□□□ 0.54
TNFRSF11A-206ENST00000617039 MBIPQ9NS73 344 aa18.44■□□□□ 0.54
TNFRSF11A-206ENST00000617039 MPRIPQ6WCQ1 1025 aa18.44■□□□□ 0.54
TNFRSF11A-206ENST00000617039 THEMISQ8N1K5 641 aaPredicted RBP18.44■□□□□ 0.54
TNFRSF11A-206ENST00000617039 CABLES1Q8TDN4 633 aa18.44■□□□□ 0.54
TNFRSF11A-206ENST00000617039 ZNF518AQ6AHZ1 1483 aa18.43■□□□□ 0.54
TNFRSF11A-206ENST00000617039 FCHSD2O94868 740 aa18.43■□□□□ 0.54
TNFRSF11A-206ENST00000617039 COL17A1Q9UMD9 1497 aaPredicted RBP18.43■□□□□ 0.54
TNFRSF11A-206ENST00000617039 SHANK2Q9UPX8 1470 aa18.43■□□□□ 0.54
TNFRSF11A-206ENST00000617039 C1orf141Q5JVX7 400 aa18.43■□□□□ 0.54
TNFRSF11A-206ENST00000617039 DDX54Q8TDD1 881 aaKnown RBP18.43■□□□□ 0.54
TNFRSF11A-206ENST00000617039 LRPPRCP42704 1394 aaKnown RBP18.42■□□□□ 0.54
TNFRSF11A-206ENST00000617039 MYL6BP14649 208 aa18.42■□□□□ 0.54
TNFRSF11A-206ENST00000617039 ATP10AO60312 1499 aa18.42■□□□□ 0.54
TNFRSF11A-206ENST00000617039 KIF16BQ96L93 1317 aa18.42■□□□□ 0.54
TNFRSF11A-206ENST00000617039 FAM177BA6PVY3 158 aa18.41■□□□□ 0.54
TNFRSF11A-206ENST00000617039 LTKP29376 864 aa18.41■□□□□ 0.54
TNFRSF11A-206ENST00000617039 HSPA2P54652 639 aa18.41■□□□□ 0.54
TNFRSF11A-206ENST00000617039 FGD1P98174 961 aa18.41■□□□□ 0.54
TNFRSF11A-206ENST00000617039 C9orf78Q9NZ63 289 aaPredicted RBP18.41■□□□□ 0.54
TNFRSF11A-206ENST00000617039 CHRNA2Q15822 529 aa18.41■□□□□ 0.54
TNFRSF11A-206ENST00000617039 C16orf71Q8IYS4 520 aaPredicted RBP18.41■□□□□ 0.54
TNFRSF11A-206ENST00000617039 IL27Q8NEV9 243 aa18.41■□□□□ 0.54
TNFRSF11A-206ENST00000617039 LRRC59Q96AG4 307 aaKnown RBP18.41■□□□□ 0.54
TNFRSF11A-206ENST00000617039 CCDC85AQ96PX6 553 aaPredicted RBP18.41■□□□□ 0.54
TNFRSF11A-206ENST00000617039 SIL1Q9H173 461 aa18.4■□□□□ 0.54
TNFRSF11A-206ENST00000617039 NKTRP30414 1462 aaKnown RBP18.4■□□□□ 0.54
TNFRSF11A-206ENST00000617039 CDC42BPAQ5VT25 1732 aa18.4■□□□□ 0.54
TNFRSF11A-206ENST00000617039 KCNA6P17658 529 aa18.4■□□□□ 0.54
TNFRSF11A-206ENST00000617039 ANO2Q9NQ90 1003 aa18.4■□□□□ 0.54
TNFRSF11A-206ENST00000617039 ATP7AQ04656 1500 aa18.4■□□□□ 0.54
TNFRSF11A-206ENST00000617039 LARP6Q9BRS8 491 aaKnown RBP18.39■□□□□ 0.54
TNFRSF11A-206ENST00000617039 BRPF3Q9ULD4 1205 aa18.39■□□□□ 0.53
TNFRSF11A-206ENST00000617039 HDGFL1Q5TGJ6 251 aa18.39■□□□□ 0.53
TNFRSF11A-206ENST00000617039 ASXL1Q8IXJ9 1541 aa18.38■□□□□ 0.53
TNFRSF11A-206ENST00000617039 API5Q9BZZ5 524 aaKnown RBP18.38■□□□□ 0.53
TNFRSF11A-206ENST00000617039 ZNF530Q6P9A1 599 aaPredicted RBP18.37■□□□□ 0.53
TNFRSF11A-206ENST00000617039 SURF6O75683 361 aaKnown RBP18.37■□□□□ 0.53
TNFRSF11A-206ENST00000617039 ANP32BQ92688 251 aaKnown RBP18.36■□□□□ 0.53
TNFRSF11A-206ENST00000617039 CHMP4BQ9H444 224 aaKnown RBP18.36■□□□□ 0.53
TNFRSF11A-206ENST00000617039 EIF4A2Q14240 407 aaKnown RBP18.36■□□□□ 0.53
TNFRSF11A-206ENST00000617039 ATF3P18847 181 aa18.35■□□□□ 0.53
TNFRSF11A-206ENST00000617039 ZNF692Q9BU19 519 aaPredicted RBP18.35■□□□□ 0.53
TNFRSF11A-206ENST00000617039 TRIM35Q9UPQ4 493 aa18.35■□□□□ 0.53
TNFRSF11A-206ENST00000617039 HMMRO75330 724 aa18.35■□□□□ 0.53
TNFRSF11A-206ENST00000617039 EVA1CP58658 441 aa18.35■□□□□ 0.53
TNFRSF11A-206ENST00000617039 ZMYM3Q14202 1370 aa18.34■□□□□ 0.53
TNFRSF11A-206ENST00000617039 ANKLE2Q86XL3 938 aa18.34■□□□□ 0.53
TNFRSF11A-206ENST00000617039 RBM42Q9BTD8 480 aaKnown RBP18.34■□□□□ 0.53
TNFRSF11A-206ENST00000617039 GOLGA6L22H0YM25 854 aa18.33■□□□□ 0.53
TNFRSF11A-206ENST00000617039 PTCD1O75127 700 aaKnown RBP18.33■□□□□ 0.53
TNFRSF11A-206ENST00000617039 CHD1LQ86WJ1 897 aa18.33■□□□□ 0.53
TNFRSF11A-206ENST00000617039 NPHP1O15259 732 aa18.33■□□□□ 0.52
TNFRSF11A-206ENST00000617039 KDM5CP41229 1560 aa18.33■□□□□ 0.52
TNFRSF11A-206ENST00000617039 RAPGEF4Q8WZA2 1011 aa18.33■□□□□ 0.52
TNFRSF11A-206ENST00000617039 ANKRD36BQ8N2N9 1353 aa18.32■□□□□ 0.52
TNFRSF11A-206ENST00000617039 NUTM1Q86Y26 1132 aa18.32■□□□□ 0.52
TNFRSF11A-206ENST00000617039 MEIS3Q99687 375 aa18.32■□□□□ 0.52
TNFRSF11A-206ENST00000617039 FOSBP53539 338 aa18.32■□□□□ 0.52
TNFRSF11A-206ENST00000617039 GSE1Q14687 1217 aa18.32■□□□□ 0.52
TNFRSF11A-206ENST00000617039 KDM4AO75164 1064 aa18.31■□□□□ 0.52
TNFRSF11A-206ENST00000617039 ARID3AQ99856 593 aa18.31■□□□□ 0.52
TNFRSF11A-206ENST00000617039 PPIP5K1Q6PFW1 1433 aa18.31■□□□□ 0.52
TNFRSF11A-206ENST00000617039 C8orf34Q49A92 452 aa18.31■□□□□ 0.52
TNFRSF11A-206ENST00000617039 KIAA1211Q6ZU35 1233 aa18.31■□□□□ 0.52
TNFRSF11A-206ENST00000617039 TTC21BQ7Z4L5 1316 aa18.31■□□□□ 0.52
TNFRSF11A-206ENST00000617039 PTPRTO14522 1441 aa18.31■□□□□ 0.52
TNFRSF11A-206ENST00000617039 TRIM44Q96DX7 344 aaPredicted RBP18.31■□□□□ 0.52
TNFRSF11A-206ENST00000617039 ORAI2Q96SN7 254 aa18.31■□□□□ 0.52
TNFRSF11A-206ENST00000617039 RIMS2Q9UQ26 1411 aa18.3■□□□□ 0.52
TNFRSF11A-206ENST00000617039 SLC39A6Q13433 755 aa18.3■□□□□ 0.52
TNFRSF11A-206ENST00000617039 MAST1Q9Y2H9 1570 aa18.3■□□□□ 0.52
TNFRSF11A-206ENST00000617039 UBTFL1P0CB47 393 aaPredicted RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms