RNA–Protein interactions for RNA: ENST00000616833.5

CLN5-203, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,527 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-203ENST00000616833 RGS3P49796 1198 aa28.32■■■□□ 2.12
CLN5-203ENST00000616833 EMILIN1Q9Y6C2 1016 aa28.32■■■□□ 2.12
CLN5-203ENST00000616833 MAPK8IP3Q9UPT6 1336 aa28.31■■■□□ 2.12
CLN5-203ENST00000616833 LTKP29376 864 aa28.31■■■□□ 2.12
CLN5-203ENST00000616833 NUDT16Q96DE0 195 aaKnown RBP28.31■■■□□ 2.12
CLN5-203ENST00000616833 PPIP5K1Q6PFW1 1433 aa28.31■■■□□ 2.12
CLN5-203ENST00000616833 ANP32AP39687 249 aaKnown RBP28.31■■■□□ 2.12
CLN5-203ENST00000616833 HMOX1P09601 288 aa28.3■■■□□ 2.12
CLN5-203ENST00000616833 TMPOP42166 694 aaKnown RBP28.3■■■□□ 2.12
CLN5-203ENST00000616833 WDR63Q8IWG1 891 aa28.3■■■□□ 2.12
CLN5-203ENST00000616833 COL3A1P02461 1466 aaPredicted RBP28.3■■■□□ 2.12
CLN5-203ENST00000616833 POLKQ9UBT6 870 aa28.29■■■□□ 2.12
CLN5-203ENST00000616833 RLBP1P12271 317 aa28.28■■■□□ 2.12
CLN5-203ENST00000616833 IGHDP01880 384 aa28.28■■■□□ 2.12
CLN5-203ENST00000616833 BACH2Q9BYV9 841 aa28.28■■■□□ 2.12
CLN5-203ENST00000616833 TRIM35Q9UPQ4 493 aa28.28■■■□□ 2.12
CLN5-203ENST00000616833 CENPQQ7L2Z9 268 aaPredicted RBP28.27■■■□□ 2.12
CLN5-203ENST00000616833 RIPK4P57078 832 aa28.27■■■□□ 2.12
CLN5-203ENST00000616833 RRS1Q15050 365 aaKnown RBP28.26■■■□□ 2.11
CLN5-203ENST00000616833 TMEM2Q9UHN6 1383 aa28.26■■■□□ 2.11
CLN5-203ENST00000616833 KIF20BQ96Q89 1820 aa28.26■■■□□ 2.11
CLN5-203ENST00000616833 DLC1Q96QB1 1528 aa28.26■■■□□ 2.11
CLN5-203ENST00000616833 ANKRD26Q9UPS8 1709 aa28.25■■■□□ 2.11
CLN5-203ENST00000616833 ROBO2Q9HCK4 1378 aa28.24■■■□□ 2.11
CLN5-203ENST00000616833 EXOSC9Q06265 439 aaKnown RBP28.24■■■□□ 2.11
CLN5-203ENST00000616833 CCDC27Q2M243 656 aa28.24■■■□□ 2.11
CLN5-203ENST00000616833 NOP58Q9Y2X3 529 aaKnown RBP28.24■■■□□ 2.11
CLN5-203ENST00000616833 PRR36Q9H6K5 1346 aa28.24■■■□□ 2.11
CLN5-203ENST00000616833 PRKAR2BP31323 418 aa28.23■■■□□ 2.11
CLN5-203ENST00000616833 MYH16Q9H6N6 1097 aa28.23■■■□□ 2.11
CLN5-203ENST00000616833 LAS1LQ9Y4W2 734 aaKnown RBP28.22■■■□□ 2.11
CLN5-203ENST00000616833 SOX12O15370 315 aa28.21■■■□□ 2.11
CLN5-203ENST00000616833 HDGFP51858 240 aaKnown RBP28.21■■■□□ 2.11
CLN5-203ENST00000616833 THUMPD2Q9BTF0 503 aaKnown RBP28.21■■■□□ 2.11
CLN5-203ENST00000616833 TRHP20396 242 aaPredicted RBP28.2■■■□□ 2.11
CLN5-203ENST00000616833 IPO9Q96P70 1041 aaKnown RBP28.2■■■□□ 2.11
CLN5-203ENST00000616833 UBR1Q8IWV7 1749 aa28.2■■■□□ 2.1
CLN5-203ENST00000616833 MS4A1P11836 297 aa28.2■■■□□ 2.1
CLN5-203ENST00000616833 CCDC61Q9Y6R9 512 aa28.2■■■□□ 2.1
CLN5-203ENST00000616833 ADGRB2O60241 1585 aa28.19■■■□□ 2.1
CLN5-203ENST00000616833 PHACTR3Q96KR7 559 aa28.19■■■□□ 2.1
CLN5-203ENST00000616833 MED14O60244 1454 aa28.18■■■□□ 2.1
CLN5-203ENST00000616833 MAP2P11137 1827 aaKnown RBP28.18■■■□□ 2.1
CLN5-203ENST00000616833 PDE3AQ14432 1141 aa28.18■■■□□ 2.1
CLN5-203ENST00000616833 CPS1P31327 1500 aa28.18■■■□□ 2.1
CLN5-203ENST00000616833 ATP7BP35670 1465 aa28.18■■■□□ 2.1
CLN5-203ENST00000616833 ADAMTS13Q76LX8 1427 aa28.16■■■□□ 2.1
CLN5-203ENST00000616833 CPSF1Q10570 1443 aaKnown RBP28.15■■■□□ 2.1
CLN5-203ENST00000616833 PNPLA6Q8IY17 1366 aa28.15■■■□□ 2.1
CLN5-203ENST00000616833 COG3Q96JB2 828 aa28.14■■■□□ 2.1
CLN5-203ENST00000616833 RSPH6AQ9H0K4 717 aa28.14■■■□□ 2.1
CLN5-203ENST00000616833 SMC4Q9NTJ3 1288 aa28.14■■■□□ 2.1
CLN5-203ENST00000616833 LRRC7Q96NW7 1537 aa28.13■■■□□ 2.09
CLN5-203ENST00000616833 NBR1Q14596 966 aa28.13■■■□□ 2.09
CLN5-203ENST00000616833 ZBTB47Q9UFB7 747 aaPredicted RBP28.13■■■□□ 2.09
CLN5-203ENST00000616833 PCDHB15Q9Y5E8 787 aa28.12■■■□□ 2.09
CLN5-203ENST00000616833 EDC4Q6P2E9 1401 aaKnown RBP28.12■■■□□ 2.09
CLN5-203ENST00000616833 PMFBP1Q8TBY8 1022 aa28.11■■■□□ 2.09
CLN5-203ENST00000616833 SSH1Q8WYL5 1049 aa28.11■■■□□ 2.09
CLN5-203ENST00000616833 MYT1Q01538 1121 aa28.09■■■□□ 2.09
CLN5-203ENST00000616833 FCHSD2O94868 740 aa28.09■■■□□ 2.09
CLN5-203ENST00000616833 ACEP12821 1306 aa28.08■■■□□ 2.09
CLN5-203ENST00000616833 FAM135BQ49AJ0 1406 aa28.08■■■□□ 2.09
CLN5-203ENST00000616833 PTPRUQ92729 1446 aa28.08■■■□□ 2.09
CLN5-203ENST00000616833 AMOTL2Q9Y2J4 779 aa28.08■■■□□ 2.08
CLN5-203ENST00000616833 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.07■■■□□ 2.08
CLN5-203ENST00000616833 IL13P35225 146 aa28.07■■■□□ 2.08
CLN5-203ENST00000616833 FTSJ3Q8IY81 847 aaKnown RBP28.07■■■□□ 2.08
CLN5-203ENST00000616833 EID1Q9Y6B2 187 aa28.07■■■□□ 2.08
CLN5-203ENST00000616833 ELL2O00472 640 aaPredicted RBP28.07■■■□□ 2.08
CLN5-203ENST00000616833 NEFMP07197 916 aa28.06■■■□□ 2.08
CLN5-203ENST00000616833 CDC42BPGQ6DT37 1551 aa28.05■■■□□ 2.08
CLN5-203ENST00000616833 TECPR2O15040 1411 aa28.05■■■□□ 2.08
CLN5-203ENST00000616833 C8orf34Q49A92 452 aa28.05■■■□□ 2.08
CLN5-203ENST00000616833 ZKSCAN2Q63HK3 967 aa28.05■■■□□ 2.08
CLN5-203ENST00000616833 FAM83GA6ND36 823 aa28.04■■■□□ 2.08
CLN5-203ENST00000616833 NOB1Q9ULX3 412 aaKnown RBP28.04■■■□□ 2.08
CLN5-203ENST00000616833 DCTN1Q14203 1278 aa28.03■■■□□ 2.08
CLN5-203ENST00000616833 PLEKHG1Q9ULL1 1385 aa28.03■■■□□ 2.08
CLN5-203ENST00000616833 KNDC1Q76NI1 1749 aa28.03■■■□□ 2.08
CLN5-203ENST00000616833 TRIM27P14373 513 aa28.02■■■□□ 2.08
CLN5-203ENST00000616833 AEBP1Q8IUX7 1158 aa28.02■■■□□ 2.08
CLN5-203ENST00000616833 DZIP1LQ8IYY4 767 aaKnown RBP28.02■■■□□ 2.08
CLN5-203ENST00000616833 C3P01024 1663 aa28.01■■■□□ 2.07
CLN5-203ENST00000616833 RBM33Q96EV2 1170 aaKnown RBP28.01■■■□□ 2.07
CLN5-203ENST00000616833 PNNQ9H307 717 aaKnown RBP28.01■■■□□ 2.07
CLN5-203ENST00000616833 ITPRIPQ8IWB1 547 aa28■■■□□ 2.07
CLN5-203ENST00000616833 SIRT1Q96EB6 747 aa28■■■□□ 2.07
CLN5-203ENST00000616833 TTC21BQ7Z4L5 1316 aa28■■■□□ 2.07
CLN5-203ENST00000616833 SLC4A3P48751 1232 aa28■■■□□ 2.07
CLN5-203ENST00000616833 FAM161AQ3B820 660 aa28■■■□□ 2.07
CLN5-203ENST00000616833 MVPQ14764 893 aaKnown RBP27.99■■■□□ 2.07
CLN5-203ENST00000616833 NFE2L2Q16236 605 aa27.99■■■□□ 2.07
CLN5-203ENST00000616833 ITSN1Q15811 1721 aa27.98■■■□□ 2.07
CLN5-203ENST00000616833 MON2Q7Z3U7 1717 aa27.98■■■□□ 2.07
CLN5-203ENST00000616833 TSPYL6Q8N831 410 aa27.97■■■□□ 2.07
CLN5-203ENST00000616833 ZNF692Q9BU19 519 aaPredicted RBP27.97■■■□□ 2.07
CLN5-203ENST00000616833 NCBP3Q53F19 620 aaKnown RBP27.96■■■□□ 2.07
CLN5-203ENST00000616833 HSP90AB2PQ58FF8 381 aa27.95■■■□□ 2.07
CLN5-203ENST00000616833 NUTM2GQ5VZR2 741 aa27.95■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms