RNA–Protein interactions for RNA: ENST00000616577.4

TPT1-214, Transcript of tumor protein, translationally-controlled 1, humanhuman

TSL 3 BASIC

Gene TPT1, Length 4,814 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPT1-214ENST00000616577 CCDC173Q0VFZ6 552 aa12.6□□□□□ -0.39
TPT1-214ENST00000616577 FAM69CQ0P6D2 419 aa12.6□□□□□ -0.39
TPT1-214ENST00000616577 NCBP3Q53F19 620 aaKnown RBP12.6□□□□□ -0.39
TPT1-214ENST00000616577 NFXL1Q6ZNB6 911 aa12.6□□□□□ -0.39
TPT1-214ENST00000616577 TXNDC2Q86VQ3 553 aa12.6□□□□□ -0.39
TPT1-214ENST00000616577 RAPGEF4Q8WZA2 1011 aa12.6□□□□□ -0.39
TPT1-214ENST00000616577 CDK19Q9BWU1 502 aa12.6□□□□□ -0.39
TPT1-214ENST00000616577 TSPY26PQ9H489 355 aa12.6□□□□□ -0.39
TPT1-214ENST00000616577 WASHC4Q2M389 1173 aa12.6□□□□□ -0.39
TPT1-214ENST00000616577 GAS2L2Q8NHY3 880 aa12.6□□□□□ -0.39
TPT1-214ENST00000616577 TRIM5Q9C035 493 aa12.6□□□□□ -0.39
TPT1-214ENST00000616577 RBM10P98175 930 aaKnown RBP12.59□□□□□ -0.39
TPT1-214ENST00000616577 EVA1CP58658 441 aa12.59□□□□□ -0.39
TPT1-214ENST00000616577 THUMPD2Q9BTF0 503 aaKnown RBP12.59□□□□□ -0.39
TPT1-214ENST00000616577 RALYLQ86SE5 291 aaKnown RBP12.59□□□□□ -0.39
TPT1-214ENST00000616577 ZNF428Q96B54 188 aa12.59□□□□□ -0.39
TPT1-214ENST00000616577 NLRP2Q9NX02 1062 aa12.59□□□□□ -0.39
TPT1-214ENST00000616577 TMPOP42166 694 aaKnown RBP12.59□□□□□ -0.39
TPT1-214ENST00000616577 EPRSP07814 1512 aaKnown RBP12.58□□□□□ -0.39
TPT1-214ENST00000616577 PSMA5P28066 241 aa12.58□□□□□ -0.4
TPT1-214ENST00000616577 VPS53Q5VIR6 699 aa12.58□□□□□ -0.4
TPT1-214ENST00000616577 NCOA1Q15788 1441 aa12.58□□□□□ -0.4
TPT1-214ENST00000616577 HDGFL1Q5TGJ6 251 aa12.58□□□□□ -0.4
TPT1-214ENST00000616577 RARSP54136 660 aaKnown RBP12.58□□□□□ -0.4
TPT1-214ENST00000616577 ESPNB1AK53 854 aa12.58□□□□□ -0.4
TPT1-214ENST00000616577 SYTL4Q96C24 671 aaPredicted RBP12.57□□□□□ -0.4
TPT1-214ENST00000616577 CWC22Q9HCG8 908 aaKnown RBP12.57□□□□□ -0.4
TPT1-214ENST00000616577 PCF11O94913 1555 aaKnown RBP12.57□□□□□ -0.4
TPT1-214ENST00000616577 NSD3Q9BZ95 1437 aa12.57□□□□□ -0.4
TPT1-214ENST00000616577 MAP4K4O95819 1239 aaPredicted RBP12.57□□□□□ -0.4
TPT1-214ENST00000616577 SPC24Q8NBT2 197 aa12.57□□□□□ -0.4
TPT1-214ENST00000616577 SSH1Q8WYL5 1049 aa12.57□□□□□ -0.4
TPT1-214ENST00000616577 FMNL2Q96PY5 1086 aa12.57□□□□□ -0.4
TPT1-214ENST00000616577 LRRCC1Q9C099 1032 aa12.57□□□□□ -0.4
TPT1-214ENST00000616577 KDM4AO75164 1064 aa12.57□□□□□ -0.4
TPT1-214ENST00000616577 GPS2Q13227 327 aa12.57□□□□□ -0.4
TPT1-214ENST00000616577 RRS1Q15050 365 aaKnown RBP12.57□□□□□ -0.4
TPT1-214ENST00000616577 ABTB2Q8N961 1025 aa12.57□□□□□ -0.4
TPT1-214ENST00000616577 SUPT6HQ7KZ85 1726 aaKnown RBP12.56□□□□□ -0.4
TPT1-214ENST00000616577 IPO7O95373 1038 aaKnown RBP12.56□□□□□ -0.4
TPT1-214ENST00000616577 PCMTD1Q96MG8 357 aaPredicted RBP12.56□□□□□ -0.4
TPT1-214ENST00000616577 DNAJC2Q99543 621 aaKnown RBP12.56□□□□□ -0.4
TPT1-214ENST00000616577 TMX4Q9H1E5 349 aaPredicted RBP12.56□□□□□ -0.4
TPT1-214ENST00000616577 CIZ1Q9ULV3 898 aaPredicted RBP12.56□□□□□ -0.4
TPT1-214ENST00000616577 G3V3G9 751 aa12.56□□□□□ -0.4
TPT1-214ENST00000616577 CEBPZQ03701 1054 aaKnown RBP12.56□□□□□ -0.4
TPT1-214ENST00000616577 DCAF8Q5TAQ9 597 aa12.56□□□□□ -0.4
TPT1-214ENST00000616577 MNS1Q8NEH6 495 aa12.56□□□□□ -0.4
TPT1-214ENST00000616577 TPM2P07951 284 aa12.56□□□□□ -0.4
TPT1-214ENST00000616577 PDCP20941 246 aa12.56□□□□□ -0.4
TPT1-214ENST00000616577 DUSP27Q5VZP5 1158 aa12.55□□□□□ -0.4
TPT1-214ENST00000616577 HECW1Q76N89 1606 aa12.55□□□□□ -0.4
TPT1-214ENST00000616577 ABCC5O15440 1437 aa12.55□□□□□ -0.4
TPT1-214ENST00000616577 CCT4P50991 539 aaKnown RBP12.55□□□□□ -0.4
TPT1-214ENST00000616577 IL1RAPL2Q9NP60 686 aa12.55□□□□□ -0.4
TPT1-214ENST00000616577 HOOK1Q9UJC3 728 aaKnown RBP12.55□□□□□ -0.4
TPT1-214ENST00000616577 ANKRD20A12PQ8NF67 263 aa12.55□□□□□ -0.4
TPT1-214ENST00000616577 SAFBQ15424 915 aaKnown RBP eCLIP12.54□□□□□ -0.4
TPT1-214ENST00000616577 KINO60870 393 aaKnown RBP12.54□□□□□ -0.4
TPT1-214ENST00000616577 MAP7D2Q96T17 732 aa12.54□□□□□ -0.4
TPT1-214ENST00000616577 FCHSD2O94868 740 aa12.54□□□□□ -0.4
TPT1-214ENST00000616577 LETM1O95202 739 aaPredicted RBP12.54□□□□□ -0.4
TPT1-214ENST00000616577 STK3Q13188 491 aa12.53□□□□□ -0.4
TPT1-214ENST00000616577 TBC1D2Q9BYX2 928 aa12.53□□□□□ -0.4
TPT1-214ENST00000616577 WDR33Q9C0J8 1336 aaKnown RBP12.53□□□□□ -0.4
TPT1-214ENST00000616577 ATP2B1P20020 1258 aa12.53□□□□□ -0.4
TPT1-214ENST00000616577 SRCIN1Q9C0H9 1055 aa12.53□□□□□ -0.4
TPT1-214ENST00000616577 EXOC6BQ9Y2D4 811 aa12.53□□□□□ -0.4
TPT1-214ENST00000616577 VPS37DQ86XT2 251 aa12.53□□□□□ -0.4
TPT1-214ENST00000616577 NAT10Q9H0A0 1025 aaKnown RBP12.53□□□□□ -0.4
TPT1-214ENST00000616577 CYP46A1Q9Y6A2 500 aa12.53□□□□□ -0.4
TPT1-214ENST00000616577 ERICH2A1L162 156 aa12.53□□□□□ -0.4
TPT1-214ENST00000616577 NFE2L2Q16236 605 aa12.53□□□□□ -0.4
TPT1-214ENST00000616577 CEP89Q96ST8 783 aa12.53□□□□□ -0.4
TPT1-214ENST00000616577 SIL1Q9H173 461 aa12.53□□□□□ -0.4
TPT1-214ENST00000616577 PDILTQ8N807 584 aa12.52□□□□□ -0.41
TPT1-214ENST00000616577 MTERF4Q7Z6M4 381 aaKnown RBP12.52□□□□□ -0.41
TPT1-214ENST00000616577 RAD21O60216 631 aa12.51□□□□□ -0.41
TPT1-214ENST00000616577 DCTN1Q14203 1278 aa12.51□□□□□ -0.41
TPT1-214ENST00000616577 CCDC70Q6NSX1 233 aa12.51□□□□□ -0.41
TPT1-214ENST00000616577 RPAP2Q8IXW5 612 aaPredicted RBP12.51□□□□□ -0.41
TPT1-214ENST00000616577 SRGAP3O43295 1099 aa12.51□□□□□ -0.41
TPT1-214ENST00000616577 DHX16O60231 1041 aaKnown RBP12.51□□□□□ -0.41
TPT1-214ENST00000616577 HMGN5P82970 282 aaKnown RBP12.51□□□□□ -0.41
TPT1-214ENST00000616577 TEX35Q5T0J7 233 aa12.51□□□□□ -0.41
TPT1-214ENST00000616577 SLC52A1Q9NWF4 448 aa12.51□□□□□ -0.41
TPT1-214ENST00000616577 PLEKHH2Q8IVE3 1493 aa12.51□□□□□ -0.41
TPT1-214ENST00000616577 RAPGEF3O95398 923 aa12.51□□□□□ -0.41
TPT1-214ENST00000616577 UPF3BQ9BZI7 483 aaKnown RBP12.51□□□□□ -0.41
TPT1-214ENST00000616577 SMC2O95347 1197 aa12.51□□□□□ -0.41
TPT1-214ENST00000616577 ARGLU1Q9NWB6 273 aaPredicted RBP12.51□□□□□ -0.41
TPT1-214ENST00000616577 MIS18AQ9NYP9 233 aa12.51□□□□□ -0.41
TPT1-214ENST00000616577 NKTRP30414 1462 aaKnown RBP12.51□□□□□ -0.41
TPT1-214ENST00000616577 LRPPRCP42704 1394 aaKnown RBP12.5□□□□□ -0.41
TPT1-214ENST00000616577 RPRD2Q5VT52 1461 aaKnown RBP12.5□□□□□ -0.41
TPT1-214ENST00000616577 SMARCA5O60264 1052 aaPredicted RBP12.5□□□□□ -0.41
TPT1-214ENST00000616577 CCDC192P0DO97 292 aa12.5□□□□□ -0.41
TPT1-214ENST00000616577 PLEKHO1Q53GL0 409 aaPredicted RBP12.5□□□□□ -0.41
TPT1-214ENST00000616577 LARP1BQ659C4 914 aaKnown RBP12.5□□□□□ -0.41
TPT1-214ENST00000616577 OLFM4Q6UX06 510 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms