RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 MON2Q7Z3U7 1717 aa11.15□□□□□ -0.63
PCDH9-205ENST00000614931 SBNO1A3KN83 1393 aa11.15□□□□□ -0.63
PCDH9-205ENST00000614931 TNS3Q68CZ2 1445 aa11.14□□□□□ -0.63
PCDH9-205ENST00000614931 RBM6P78332 1123 aaKnown RBP11.13□□□□□ -0.63
PCDH9-205ENST00000614931 SRPK2P78362 688 aaKnown RBP11.13□□□□□ -0.63
PCDH9-205ENST00000614931 DIEXFQ68CQ4 756 aaKnown RBP11.13□□□□□ -0.63
PCDH9-205ENST00000614931 PMFBP1Q8TBY8 1022 aa11.13□□□□□ -0.63
PCDH9-205ENST00000614931 PUS7Q96PZ0 661 aaKnown RBP11.13□□□□□ -0.63
PCDH9-205ENST00000614931 ATAD2Q6PL18 1390 aa11.13□□□□□ -0.63
PCDH9-205ENST00000614931 NRKQ7Z2Y5 1582 aa11.12□□□□□ -0.63
PCDH9-205ENST00000614931 SLC24A1O60721 1099 aa11.12□□□□□ -0.63
PCDH9-205ENST00000614931 CDCA8Q53HL2 280 aa11.12□□□□□ -0.63
PCDH9-205ENST00000614931 USP21Q9UK80 565 aa11.12□□□□□ -0.63
PCDH9-205ENST00000614931 TRPM3Q9HCF6 1732 aaPredicted RBP11.12□□□□□ -0.63
PCDH9-205ENST00000614931 BCL9LQ86UU0 1499 aa11.12□□□□□ -0.63
PCDH9-205ENST00000614931 PPIP5K1Q6PFW1 1433 aa11.11□□□□□ -0.63
PCDH9-205ENST00000614931 SLC12A5Q9H2X9 1139 aa11.11□□□□□ -0.63
PCDH9-205ENST00000614931 TRPC5Q9UL62 973 aaPredicted RBP11.11□□□□□ -0.63
PCDH9-205ENST00000614931 ARHGEF10O15013 1369 aa11.11□□□□□ -0.63
PCDH9-205ENST00000614931 KIF20BQ96Q89 1820 aa11.11□□□□□ -0.63
PCDH9-205ENST00000614931 ATRNO75882 1429 aa11.1□□□□□ -0.63
PCDH9-205ENST00000614931 NUDT16Q96DE0 195 aaKnown RBP11.1□□□□□ -0.63
PCDH9-205ENST00000614931 PANK3Q9H999 370 aa11.1□□□□□ -0.63
PCDH9-205ENST00000614931 A0A1W2PP64 1363 aa11.1□□□□□ -0.63
PCDH9-205ENST00000614931 RGS12O14924 1447 aa11.09□□□□□ -0.63
PCDH9-205ENST00000614931 ABCA3Q99758 1704 aa11.09□□□□□ -0.63
PCDH9-205ENST00000614931 ANKRD26Q9UPS8 1709 aa11.09□□□□□ -0.63
PCDH9-205ENST00000614931 ALS2Q96Q42 1657 aa11.09□□□□□ -0.63
PCDH9-205ENST00000614931 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.09□□□□□ -0.63
PCDH9-205ENST00000614931 SLIT2O94813 1529 aa11.09□□□□□ -0.63
PCDH9-205ENST00000614931 ANKRD36BQ8N2N9 1353 aa11.08□□□□□ -0.64
PCDH9-205ENST00000614931 NINLQ9Y2I6 1382 aa11.08□□□□□ -0.64
PCDH9-205ENST00000614931 PER1O15534 1290 aaPredicted RBP11.08□□□□□ -0.64
PCDH9-205ENST00000614931 TMC1Q8TDI8 760 aa11.08□□□□□ -0.64
PCDH9-205ENST00000614931 CABLES1Q8TDN4 633 aa11.08□□□□□ -0.64
PCDH9-205ENST00000614931 CARD14Q9BXL6 1004 aa11.08□□□□□ -0.64
PCDH9-205ENST00000614931 CABP1Q9NZU7 370 aa11.08□□□□□ -0.64
PCDH9-205ENST00000614931 CPSF1Q10570 1443 aaKnown RBP11.08□□□□□ -0.64
PCDH9-205ENST00000614931 LMOD2Q6P5Q4 547 aa11.07□□□□□ -0.64
PCDH9-205ENST00000614931 NGDNQ8NEJ9 315 aaKnown RBP11.07□□□□□ -0.64
PCDH9-205ENST00000614931 UPF1Q92900 1129 aaKnown RBP eCLIP11.07□□□□□ -0.64
PCDH9-205ENST00000614931 NSD3Q9BZ95 1437 aa11.07□□□□□ -0.64
PCDH9-205ENST00000614931 POLR3AO14802 1390 aaPredicted RBP11.06□□□□□ -0.64
PCDH9-205ENST00000614931 PLEKHG3A1L390 1219 aa11.06□□□□□ -0.64
PCDH9-205ENST00000614931 HAP1P54257 671 aaPredicted RBP11.06□□□□□ -0.64
PCDH9-205ENST00000614931 UNC5CLQ8IV45 518 aa11.06□□□□□ -0.64
PCDH9-205ENST00000614931 CCDC61Q9Y6R9 512 aa11.06□□□□□ -0.64
PCDH9-205ENST00000614931 NWD2Q9ULI1 1742 aa11.06□□□□□ -0.64
PCDH9-205ENST00000614931 PLCH1Q4KWH8 1693 aa11.05□□□□□ -0.64
PCDH9-205ENST00000614931 GJD4Q96KN9 370 aaPredicted RBP11.05□□□□□ -0.64
PCDH9-205ENST00000614931 CRYBG1Q9Y4K1 1723 aa11.05□□□□□ -0.64
PCDH9-205ENST00000614931 FAM83GA6ND36 823 aa11.04□□□□□ -0.64
PCDH9-205ENST00000614931 PLEKHG5O94827 1062 aa11.04□□□□□ -0.64
PCDH9-205ENST00000614931 MIER1Q8N108 512 aa11.04□□□□□ -0.64
PCDH9-205ENST00000614931 PIK3C2AO00443 1686 aa11.04□□□□□ -0.64
PCDH9-205ENST00000614931 ACEP12821 1306 aa11.04□□□□□ -0.64
PCDH9-205ENST00000614931 USP6P35125 1406 aa11.03□□□□□ -0.64
PCDH9-205ENST00000614931 PAK3O75914 559 aaPredicted RBP11.03□□□□□ -0.64
PCDH9-205ENST00000614931 AMER1Q5JTC6 1135 aaPredicted RBP11.03□□□□□ -0.64
PCDH9-205ENST00000614931 USP54Q70EL1 1684 aa11.03□□□□□ -0.64
PCDH9-205ENST00000614931 GLI3P10071 1580 aa11.03□□□□□ -0.64
PCDH9-205ENST00000614931 KTN1Q86UP2 1357 aaKnown RBP11.03□□□□□ -0.64
PCDH9-205ENST00000614931 EDC4Q6P2E9 1401 aaKnown RBP11.02□□□□□ -0.64
PCDH9-205ENST00000614931 SSH2Q76I76 1423 aa11.02□□□□□ -0.64
PCDH9-205ENST00000614931 VPS72Q15906 364 aa11.02□□□□□ -0.65
PCDH9-205ENST00000614931 COL14A1Q05707 1796 aaKnown RBP11.01□□□□□ -0.65
PCDH9-205ENST00000614931 CNGB1Q14028 1251 aaPredicted RBP11.01□□□□□ -0.65
PCDH9-205ENST00000614931 HDGFL2Q7Z4V5 671 aaPredicted RBP11.01□□□□□ -0.65
PCDH9-205ENST00000614931 TERF2IPQ9NYB0 399 aa11.01□□□□□ -0.65
PCDH9-205ENST00000614931 PARD3Q8TEW0 1356 aa11.01□□□□□ -0.65
PCDH9-205ENST00000614931 NPC1L1Q9UHC9 1359 aa11.01□□□□□ -0.65
PCDH9-205ENST00000614931 NRAPQ86VF7 1730 aa11.01□□□□□ -0.65
PCDH9-205ENST00000614931 PHRF1Q9P1Y6 1649 aaKnown RBP11□□□□□ -0.65
PCDH9-205ENST00000614931 ONECUT3O60422 494 aaPredicted RBP11□□□□□ -0.65
PCDH9-205ENST00000614931 CC2D1BQ5T0F9 858 aaKnown RBP11□□□□□ -0.65
PCDH9-205ENST00000614931 PRKRIP1Q9H875 184 aaPredicted RBP11□□□□□ -0.65
PCDH9-205ENST00000614931 KNSTRNQ9Y448 316 aa11□□□□□ -0.65
PCDH9-205ENST00000614931 BTG4Q9NY30 223 aa10.99□□□□□ -0.65
PCDH9-205ENST00000614931 BRD4O60885 1362 aaPredicted RBP10.99□□□□□ -0.65
PCDH9-205ENST00000614931 MAP2P11137 1827 aaKnown RBP10.98□□□□□ -0.65
PCDH9-205ENST00000614931 ZRANB1Q9UGI0 708 aa10.98□□□□□ -0.65
PCDH9-205ENST00000614931 TTC21BQ7Z4L5 1316 aa10.98□□□□□ -0.65
PCDH9-205ENST00000614931 BRWD3Q6RI45 1802 aa10.98□□□□□ -0.65
PCDH9-205ENST00000614931 FYB1O15117 783 aa10.97□□□□□ -0.65
PCDH9-205ENST00000614931 ANP32CO43423 234 aa10.97□□□□□ -0.65
PCDH9-205ENST00000614931 NUTM2GQ5VZR2 741 aa10.97□□□□□ -0.65
PCDH9-205ENST00000614931 NME9Q86XW9 330 aa10.97□□□□□ -0.65
PCDH9-205ENST00000614931 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.97□□□□□ -0.65
PCDH9-205ENST00000614931 ABTB2Q8N961 1025 aa10.97□□□□□ -0.65
PCDH9-205ENST00000614931 PRDM11Q9NQV5 511 aa10.97□□□□□ -0.65
PCDH9-205ENST00000614931 USP19O94966 1318 aa10.97□□□□□ -0.65
PCDH9-205ENST00000614931 CGNL1Q0VF96 1302 aa10.97□□□□□ -0.65
PCDH9-205ENST00000614931 NSD2O96028 1365 aa10.97□□□□□ -0.65
PCDH9-205ENST00000614931 KIAA0232Q92628 1395 aa10.97□□□□□ -0.65
PCDH9-205ENST00000614931 OVOS2A0A0J9YW53 1432 aa10.97□□□□□ -0.65
PCDH9-205ENST00000614931 OVOS2Q6IE36 1432 aa10.97□□□□□ -0.65
PCDH9-205ENST00000614931 CCDC184Q52MB2 194 aa10.96□□□□□ -0.65
PCDH9-205ENST00000614931 SEPT12Q8IYM1 358 aa10.96□□□□□ -0.65
PCDH9-205ENST00000614931 ZNF692Q9BU19 519 aaPredicted RBP10.96□□□□□ -0.65
PCDH9-205ENST00000614931 GGNBP2Q9H3C7 697 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms